Wall clock time and date at job start Sat Apr 11 2020 05:56:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 N 1.31936 * 119.01851 * 2 1 4 4 C 1.32126 * 121.05691 * 180.02562 * 3 2 1 5 5 C 1.38986 * 119.12929 * 0.02562 * 4 3 2 6 6 Cl 1.73597 * 120.89089 * 180.02562 * 5 4 3 7 7 C 1.39635 * 118.22291 * 359.97438 * 5 4 3 8 8 C 1.48378 * 120.56285 * 180.27375 * 7 5 4 9 9 O 1.21487 * 119.99718 * 359.72671 * 8 7 5 10 10 N 1.34773 * 120.00294 * 179.72066 * 8 7 5 11 11 C 1.46492 * 120.00284 * 180.02562 * 10 8 7 12 12 C 1.53001 * 109.47345 * 180.02562 * 11 10 8 13 13 H 1.08993 * 109.67495 * 300.02709 * 12 11 10 14 14 C 1.53297 * 109.67871 * 179.47033 * 12 11 10 15 15 O 1.42968 * 109.21999 * 187.97289 * 14 12 11 16 16 C 1.42963 * 114.16368 * 62.58512 * 15 14 12 17 17 C 1.53301 * 109.22230 * 297.41769 * 16 15 14 18 18 N 1.47148 * 108.38401 * 52.30098 * 17 16 15 19 19 C 1.36936 * 120.97879 * 129.48630 * 18 17 16 20 20 H 1.08004 * 119.99963 * 211.18966 * 19 18 17 21 21 C 1.38813 * 120.00078 * 31.18257 * 19 18 17 22 22 N 1.31614 * 119.99762 * 10.75004 * 21 19 18 23 23 Si 1.86798 * 119.99995 * 190.74425 * 21 19 18 24 24 H 1.48502 * 109.47357 * 0.02562 * 23 21 19 25 25 H 1.48499 * 109.47130 * 120.00416 * 23 21 19 26 26 H 1.48500 * 109.47566 * 240.00200 * 23 21 19 27 27 N 1.31520 * 119.02140 * 180.02562 * 2 1 3 28 28 H 1.09002 * 109.46856 * 269.97442 * 1 2 3 29 29 H 1.09001 * 109.47728 * 29.97304 * 1 2 3 30 30 H 1.09002 * 109.47050 * 149.97593 * 1 2 3 31 31 H 1.08007 * 120.43827 * 180.02562 * 4 3 2 32 32 H 0.97001 * 119.99610 * 0.02562 * 10 8 7 33 33 H 1.09008 * 109.46991 * 300.00277 * 11 10 8 34 34 H 1.08996 * 109.47315 * 60.00091 * 11 10 8 35 35 H 1.08999 * 109.51443 * 307.89530 * 14 12 11 36 36 H 1.08997 * 109.51145 * 68.05343 * 14 12 11 37 37 H 1.09001 * 109.51055 * 177.50016 * 16 15 14 38 38 H 1.09001 * 109.55675 * 57.36736 * 16 15 14 39 39 H 1.09005 * 109.67767 * 292.58007 * 17 16 15 40 40 H 1.09001 * 109.71098 * 172.04810 * 17 16 15 41 41 H 0.97006 * 119.99905 * 179.97438 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 7 2.1470 1.1537 0.0000 4 6 3.4674 1.2007 -0.0005 5 6 4.1867 0.0115 -0.0016 6 17 5.9226 0.0199 -0.0016 7 6 3.4757 -1.1903 -0.0015 8 6 4.1911 -2.4902 0.0034 9 8 5.4058 -2.5150 0.0025 10 7 3.4936 -3.6433 0.0091 11 6 4.1999 -4.9267 0.0146 12 6 3.1821 -6.0691 0.0198 13 1 2.5547 -5.9976 0.9081 14 6 3.9164 -7.4147 0.0122 15 8 2.9670 -8.4679 -0.1703 16 6 2.2675 -8.4160 -1.4160 17 6 1.4488 -7.1216 -1.4816 18 7 2.3436 -5.9912 -1.1869 19 6 2.3940 -4.8987 -2.0110 20 1 3.3152 -4.3451 -2.1181 21 6 1.2613 -4.5030 -2.7090 22 7 0.0927 -5.0375 -2.4243 23 14 1.3954 -3.2117 -4.0521 24 1 2.8084 -2.7721 -4.1768 25 1 0.9419 -3.7904 -5.3423 26 1 0.5428 -2.0463 -3.7055 27 7 2.1450 -1.1501 -0.0005 28 1 -0.3633 -0.0005 1.0277 29 1 -0.3634 0.8902 -0.5134 30 1 -0.3633 -0.8898 -0.5142 31 1 3.9811 2.1508 -0.0001 32 1 2.5238 -3.6235 0.0096 33 1 4.8249 -5.0013 -0.8755 34 1 4.8258 -4.9932 0.9045 35 1 4.6390 -7.4306 -0.8037 36 1 4.4346 -7.5520 0.9612 37 1 1.5994 -9.2737 -1.4944 38 1 2.9836 -8.4360 -2.2376 39 1 0.6467 -7.1568 -0.7443 40 1 1.0255 -7.0045 -2.4792 41 1 -0.6989 -4.7606 -2.9118 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001051149821.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 05:56:07 Heat of formation + Delta-G solvation = 5.240492 kcal Electronic energy + Delta-G solvation = -28359.026043 eV Core-core repulsion = 24301.793661 eV Total energy + Delta-G solvation = -4057.232382 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 340.109 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -41.30862 -39.24951 -38.29856 -36.69155 -35.39310 -34.09944 -33.56903 -33.00940 -31.52490 -30.44410 -28.40016 -27.32193 -26.44905 -24.82038 -23.47476 -23.05518 -21.72017 -20.40881 -19.70282 -18.30741 -17.75456 -16.64153 -16.08191 -16.00726 -15.78462 -15.52852 -15.06771 -14.89403 -14.63943 -14.35439 -13.87639 -13.79886 -13.55989 -13.40685 -12.97950 -12.95541 -12.64675 -12.39434 -11.95826 -11.82139 -11.62130 -11.39212 -11.34381 -11.09814 -10.92754 -10.91187 -10.77067 -10.43985 -10.26965 -10.08212 -10.06016 -9.67925 -9.20895 -9.17145 -8.95656 -8.70591 -8.35405 -6.74626 -5.92756 -3.41680 0.35558 0.69124 1.93958 2.93462 3.23548 3.26847 3.33563 3.36427 3.74515 3.77383 3.87606 4.31165 4.44568 4.52373 4.62505 4.95181 5.11392 5.26058 5.33752 5.53319 5.54042 5.65937 5.69983 5.78252 5.83107 5.98191 6.02278 6.12562 6.17333 6.20123 6.31260 6.49507 6.59281 6.70452 6.94267 7.05170 7.47530 7.68045 7.78305 7.84754 8.07755 8.26967 8.58905 9.03811 9.64038 10.22850 11.13885 Molecular weight = 340.11amu Principal moments of inertia in cm(-1) A = 0.011720 B = 0.004751 C = 0.003893 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2388.410470 B = 5892.319581 C = 7191.459153 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 C 0.320 3.680 3 N -0.498 5.498 4 C 0.161 3.839 5 C -0.114 4.114 6 Cl -0.006 7.006 7 C 0.157 3.843 8 C 0.553 3.447 9 O -0.527 6.527 10 N -0.664 5.664 11 C 0.133 3.867 12 C 0.124 3.876 13 H 0.043 0.957 14 C 0.057 3.943 15 O -0.392 6.392 16 C 0.035 3.965 17 C 0.144 3.856 18 N -0.591 5.591 19 C -0.255 4.255 20 H 0.071 0.929 21 C 0.018 3.982 22 N -0.895 5.895 23 Si 0.890 3.110 24 H -0.279 1.279 25 H -0.287 1.287 26 H -0.287 1.287 27 N -0.466 5.466 28 H 0.090 0.910 29 H 0.087 0.913 30 H 0.096 0.904 31 H 0.182 0.818 32 H 0.427 0.573 33 H 0.072 0.928 34 H 0.064 0.936 35 H 0.047 0.953 36 H 0.083 0.917 37 H 0.079 0.921 38 H 0.041 0.959 39 H 0.030 0.970 40 H 0.093 0.907 41 H 0.255 0.745 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.893 7.347 5.737 10.102 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C 0.053 3.947 3 N -0.213 5.213 4 C -0.008 4.008 5 C -0.147 4.147 6 Cl 0.023 6.977 7 C 0.008 3.992 8 C 0.335 3.665 9 O -0.404 6.404 10 N -0.316 5.316 11 C 0.009 3.991 12 C 0.017 3.983 13 H 0.060 0.940 14 C -0.022 4.022 15 O -0.311 6.311 16 C -0.043 4.043 17 C 0.019 3.981 18 N -0.316 5.316 19 C -0.384 4.384 20 H 0.089 0.911 21 C -0.182 4.182 22 N -0.539 5.539 23 Si 0.720 3.280 24 H -0.204 1.204 25 H -0.214 1.214 26 H -0.214 1.214 27 N -0.183 5.183 28 H 0.108 0.892 29 H 0.106 0.894 30 H 0.115 0.885 31 H 0.199 0.801 32 H 0.267 0.733 33 H 0.090 0.910 34 H 0.082 0.918 35 H 0.066 0.934 36 H 0.101 0.899 37 H 0.098 0.902 38 H 0.059 0.941 39 H 0.048 0.952 40 H 0.111 0.889 41 H 0.065 0.935 Dipole moment (debyes) X Y Z Total from point charges 3.697 7.135 5.790 9.904 hybrid contribution 0.552 1.016 -1.125 1.613 sum 4.249 8.151 4.665 10.308 Atomic orbital electron populations 1.20664 0.84687 1.05047 1.04243 1.23418 0.98715 0.82736 0.89830 1.68303 1.08885 1.30481 1.13645 1.23337 0.89304 0.97240 0.90870 1.22850 0.89554 0.96067 1.06255 1.98417 1.04587 1.98627 1.96076 1.21827 0.89558 0.94491 0.93366 1.17600 0.86605 0.82925 0.79398 1.90823 1.12100 1.86651 1.50847 1.45943 1.12487 1.04029 1.69132 1.21292 0.94542 0.81846 1.01378 1.21436 0.92482 0.92334 0.92032 0.93977 1.22852 0.90817 0.88027 1.00530 1.87806 1.55634 1.48646 1.38970 1.23358 0.95496 1.00403 0.85072 1.21416 0.90857 0.83501 1.02328 1.44078 1.47032 1.17809 1.22714 1.19198 0.94589 1.05065 1.19581 0.91107 1.25053 0.95015 0.98018 1.00143 1.69976 0.97882 1.44560 1.41444 0.86403 0.77687 0.81708 0.82199 1.20430 1.21391 1.21413 1.68476 1.07381 1.30605 1.11801 0.89161 0.89419 0.88506 0.80144 0.73282 0.90990 0.91772 0.93448 0.89874 0.90238 0.94105 0.95214 0.88936 0.93498 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.07 10.31 36.00 0.37 -0.70 16 2 C 0.32 4.88 7.64 -157.31 -1.20 3.68 16 3 N -0.50 -7.01 10.31 -10.70 -0.11 -7.12 16 4 C 0.16 2.06 11.14 -17.15 -0.19 1.86 16 5 C -0.11 -1.73 6.40 -38.78 -0.25 -1.98 16 6 Cl -0.01 -0.09 26.25 -51.86 -1.36 -1.45 16 7 C 0.16 2.77 6.79 -82.61 -0.56 2.21 16 8 C 0.55 10.56 7.82 -12.09 -0.09 10.46 16 9 O -0.53 -10.53 14.14 5.38 0.08 -10.46 16 10 N -0.66 -12.80 3.76 -61.08 -0.23 -13.03 16 11 C 0.13 2.41 4.45 -4.05 -0.02 2.39 16 12 C 0.12 2.38 3.21 -67.42 -0.22 2.16 16 13 H 0.04 0.84 8.14 -51.93 -0.42 0.42 16 14 C 0.06 0.98 6.29 37.31 0.23 1.21 16 15 O -0.39 -7.47 10.74 -35.23 -0.38 -7.85 16 16 C 0.03 0.65 6.99 37.31 0.26 0.91 16 17 C 0.14 3.22 5.38 -3.53 -0.02 3.20 16 18 N -0.59 -13.37 3.03 -164.30 -0.50 -13.87 16 19 C -0.26 -6.27 7.05 -15.06 -0.11 -6.38 16 20 H 0.07 1.80 5.81 -52.48 -0.30 1.49 16 21 C 0.02 0.46 5.06 -17.43 -0.09 0.37 16 22 N -0.90 -23.72 11.13 55.49 0.62 -23.11 16 23 Si 0.89 21.06 29.57 -169.99 -5.03 16.03 16 24 H -0.28 -6.74 7.11 56.52 0.40 -6.33 16 25 H -0.29 -6.85 7.11 56.52 0.40 -6.45 16 26 H -0.29 -6.81 7.11 56.52 0.40 -6.41 16 27 N -0.47 -8.19 9.59 -7.31 -0.07 -8.26 16 28 H 0.09 0.91 8.14 -51.93 -0.42 0.49 16 29 H 0.09 0.92 8.14 -51.93 -0.42 0.49 16 30 H 0.10 1.31 8.14 -51.93 -0.42 0.89 16 31 H 0.18 1.58 8.06 -52.48 -0.42 1.15 16 32 H 0.43 8.89 6.69 -40.82 -0.27 8.61 16 33 H 0.07 1.39 7.57 -51.92 -0.39 1.00 16 34 H 0.06 1.02 8.14 -51.93 -0.42 0.60 16 35 H 0.05 0.81 8.14 -51.93 -0.42 0.39 16 36 H 0.08 1.19 8.14 -51.93 -0.42 0.77 16 37 H 0.08 1.32 8.14 -51.93 -0.42 0.90 16 38 H 0.04 0.77 8.14 -51.93 -0.42 0.34 16 39 H 0.03 0.71 8.14 -51.93 -0.42 0.29 16 40 H 0.09 2.27 6.33 -51.93 -0.33 1.95 16 41 H 0.25 6.62 8.31 -40.82 -0.34 6.28 16 LS Contribution 352.57 15.07 5.31 5.31 Total: -1.00 -28.89 352.57 -8.63 -37.52 By element: Atomic # 1 Polarization: 11.96 SS G_CDS: -5.08 Total: 6.87 kcal Atomic # 6 Polarization: 21.29 SS G_CDS: -1.88 Total: 19.41 kcal Atomic # 7 Polarization: -65.10 SS G_CDS: -0.29 Total: -65.39 kcal Atomic # 8 Polarization: -18.00 SS G_CDS: -0.30 Total: -18.30 kcal Atomic # 14 Polarization: 21.06 SS G_CDS: -5.03 Total: 16.03 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -1.36 Total: -1.45 kcal Total LS contribution 5.31 Total: 5.31 kcal Total: -28.89 -8.63 -37.52 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001051149821.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.756 kcal (2) G-P(sol) polarization free energy of solvation -28.886 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.870 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.630 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.515 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.240 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds