Wall clock time and date at job start Sat Apr 11 2020 05:56:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.36938 * 120.00033 * 2 1 4 4 H 1.07999 * 119.99954 * 203.25686 * 3 2 1 5 5 C 1.38813 * 119.99963 * 23.26826 * 3 2 1 6 6 N 1.31622 * 119.99863 * 13.80991 * 5 3 2 7 7 Si 1.86800 * 119.99867 * 193.81407 * 5 3 2 8 8 H 1.48504 * 109.46939 * 90.00017 * 7 5 3 9 9 H 1.48505 * 109.46893 * 209.99586 * 7 5 3 10 10 H 1.48492 * 109.47256 * 329.99968 * 7 5 3 11 11 C 1.46506 * 119.99827 * 180.02562 * 2 1 3 12 12 H 1.08998 * 110.88342 * 183.88201 * 11 2 1 13 13 C 1.55156 * 111.03665 * 307.78067 * 11 2 1 14 14 C 1.54336 * 103.01848 * 153.39622 * 13 11 2 15 15 N 1.47017 * 107.26785 * 338.14255 * 14 13 11 16 16 C 1.34778 * 125.65265 * 178.85061 * 15 14 13 17 17 O 1.21273 * 120.00159 * 179.69471 * 16 15 14 18 18 C 1.50701 * 119.99449 * 359.69085 * 16 15 14 19 19 C 1.50699 * 109.46866 * 180.02562 * 18 16 15 20 20 C 1.38267 * 119.97132 * 269.72076 * 19 18 16 21 21 C 1.38215 * 120.06315 * 179.76519 * 20 19 18 22 22 C 1.38325 * 120.00941 * 0.51482 * 21 20 19 23 23 Cl 1.73598 * 120.02651 * 179.76521 * 22 21 20 24 24 C 1.38549 * 119.95279 * 359.73880 * 22 21 20 25 25 F 1.35101 * 120.03772 * 180.02562 * 24 22 21 26 26 C 1.38194 * 119.98267 * 89.99749 * 19 18 16 27 27 C 1.47430 * 108.70167 * 358.58524 * 15 14 13 28 28 H 1.09000 * 109.46785 * 275.15586 * 1 2 3 29 29 H 1.08996 * 109.46942 * 35.15368 * 1 2 3 30 30 H 1.09002 * 109.47045 * 155.15663 * 1 2 3 31 31 H 0.96996 * 119.99534 * 180.02562 * 6 5 3 32 32 H 1.08994 * 110.72440 * 271.95858 * 13 11 2 33 33 H 1.09003 * 110.71678 * 35.23072 * 13 11 2 34 34 H 1.09001 * 109.99123 * 218.66903 * 14 13 11 35 35 H 1.09001 * 109.77797 * 97.49949 * 14 13 11 36 36 H 1.09004 * 109.47107 * 300.00123 * 18 16 15 37 37 H 1.09000 * 109.47136 * 60.00058 * 18 16 15 38 38 H 1.07999 * 119.97243 * 0.02562 * 20 19 18 39 39 H 1.07998 * 119.99937 * 180.23506 * 21 20 19 40 40 H 1.08007 * 120.00058 * 0.02562 * 26 19 18 41 41 H 1.08996 * 110.36546 * 143.19597 * 27 15 14 42 42 H 1.09003 * 110.36360 * 265.51393 * 27 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1497 1.1859 0.0000 4 1 3.1639 1.2239 -0.3693 5 6 1.5403 2.3392 0.4749 6 7 0.4249 2.2562 1.1686 7 14 2.3033 4.0088 0.1293 8 1 1.7626 4.5459 -1.1453 9 1 1.9763 4.9415 1.2377 10 1 3.7774 3.8665 0.0207 11 6 2.1975 -1.2688 -0.0006 12 1 3.2717 -1.0973 0.0685 13 6 1.7076 -2.1952 1.1436 14 6 2.0204 -3.6075 0.6054 15 7 2.1185 -3.5051 -0.8579 16 6 2.4021 -4.5192 -1.6991 17 8 2.4519 -4.3198 -2.8943 18 6 2.6573 -5.9010 -1.1544 19 6 2.9493 -6.8438 -2.2932 20 6 1.9163 -7.5319 -2.9024 21 6 2.1813 -8.3934 -3.9502 22 6 3.4822 -8.5761 -4.3835 23 17 3.8163 -9.6627 -5.6955 24 6 4.5183 -7.8909 -3.7700 25 9 5.7895 -8.0676 -4.1921 26 6 4.2498 -7.0244 -2.7241 27 6 1.8489 -2.1106 -1.2533 28 1 -0.3633 0.0924 1.0235 29 1 -0.3633 0.8402 -0.5917 30 1 -0.3633 -0.9326 -0.4318 31 1 -0.0011 3.0621 1.5001 32 1 2.2603 -1.9989 2.0622 33 1 0.6361 -2.0762 1.3040 34 1 1.2193 -4.2953 0.8760 35 1 2.9672 -3.9577 1.0168 36 1 3.5118 -5.8728 -0.4782 37 1 1.7767 -6.2464 -0.6129 38 1 0.9008 -7.3929 -2.5621 39 1 1.3732 -8.9274 -4.4278 40 1 5.0568 -6.4902 -2.2445 41 1 2.4842 -1.8245 -2.0915 42 1 0.7977 -1.9866 -1.5133 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000972421297.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 05:56:34 Heat of formation + Delta-G solvation = -32.622293 kcal Electronic energy + Delta-G solvation = -26413.119473 eV Core-core repulsion = 22334.325276 eV Total energy + Delta-G solvation = -4078.794197 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 340.109 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -49.21012 -40.28938 -39.19787 -37.49598 -36.83049 -34.86778 -33.01759 -31.67207 -31.03539 -29.87653 -28.67192 -27.20881 -26.09295 -23.79662 -23.33498 -22.42083 -22.03045 -19.40463 -19.17311 -17.73335 -17.16707 -17.08314 -17.00124 -16.71026 -16.00115 -15.94780 -15.27531 -14.84089 -14.47899 -14.20303 -14.03125 -13.72875 -13.45041 -13.36417 -13.24619 -12.86168 -12.66853 -12.53886 -12.40790 -12.09530 -11.90529 -11.76059 -11.66796 -11.40067 -11.24513 -10.98607 -10.84617 -10.56434 -10.54556 -10.29626 -9.96484 -9.93468 -9.78856 -9.29581 -8.90751 -8.64841 -8.43358 -6.86416 -5.81686 -3.29543 0.59406 0.77301 1.68423 2.67717 2.90572 3.29347 3.34497 3.41626 3.42350 3.73904 4.18834 4.30460 4.42176 4.59549 4.69155 4.80408 4.94359 4.98301 5.10624 5.22264 5.27937 5.31330 5.44845 5.48126 5.53897 5.60072 5.67212 5.71249 5.84538 5.94872 6.03863 6.22866 6.31273 6.34468 6.45615 6.57035 6.69996 6.80866 7.27464 7.62761 7.68191 7.73476 8.23013 8.30544 9.13314 9.75521 10.23848 11.22779 Molecular weight = 340.11amu Principal moments of inertia in cm(-1) A = 0.025894 B = 0.002005 C = 0.001955 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1081.081686 B =13960.475897 C =14321.693392 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.159 3.841 2 N -0.585 5.585 3 C -0.262 4.262 4 H 0.070 0.930 5 C 0.005 3.995 6 N -0.904 5.904 7 Si 0.907 3.093 8 H -0.287 1.287 9 H -0.291 1.291 10 H -0.279 1.279 11 C 0.173 3.827 12 H 0.078 0.922 13 C -0.151 4.151 14 C 0.101 3.899 15 N -0.612 5.612 16 C 0.525 3.475 17 O -0.539 6.539 18 C -0.102 4.102 19 C -0.027 4.027 20 C -0.103 4.103 21 C -0.080 4.080 22 C -0.077 4.077 23 Cl -0.055 7.055 24 C 0.111 3.889 25 F -0.128 7.128 26 C -0.128 4.128 27 C 0.085 3.915 28 H 0.034 0.966 29 H 0.041 0.959 30 H 0.002 0.998 31 H 0.254 0.746 32 H 0.077 0.923 33 H 0.077 0.923 34 H 0.062 0.938 35 H 0.064 0.936 36 H 0.107 0.893 37 H 0.108 0.892 38 H 0.139 0.861 39 H 0.144 0.856 40 H 0.144 0.856 41 H 0.072 0.928 42 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.159 -23.494 -3.635 23.982 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 N -0.305 5.305 3 C -0.391 4.391 4 H 0.088 0.912 5 C -0.194 4.194 6 N -0.548 5.548 7 Si 0.737 3.263 8 H -0.214 1.214 9 H -0.217 1.217 10 H -0.204 1.204 11 C 0.062 3.938 12 H 0.096 0.904 13 C -0.192 4.192 14 C -0.023 4.023 15 N -0.347 5.347 16 C 0.313 3.687 17 O -0.416 6.416 18 C -0.142 4.142 19 C -0.027 4.027 20 C -0.121 4.121 21 C -0.099 4.099 22 C -0.104 4.104 23 Cl -0.026 7.026 24 C 0.091 3.909 25 F -0.106 7.106 26 C -0.147 4.147 27 C -0.039 4.039 28 H 0.053 0.947 29 H 0.060 0.940 30 H 0.020 0.980 31 H 0.064 0.936 32 H 0.096 0.904 33 H 0.095 0.905 34 H 0.081 0.919 35 H 0.083 0.917 36 H 0.126 0.874 37 H 0.127 0.873 38 H 0.157 0.843 39 H 0.161 0.839 40 H 0.162 0.838 41 H 0.090 0.910 42 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges 3.164 -23.358 -4.375 23.974 hybrid contribution 0.516 0.842 -0.233 1.015 sum 3.680 -22.516 -4.608 23.275 Atomic orbital electron populations 1.20817 0.82463 0.95626 0.99676 1.43817 1.01858 0.99876 1.84954 1.19218 0.98714 0.85290 1.35868 0.91227 1.25034 0.97942 0.98645 0.97735 1.70065 1.20035 1.27434 1.37284 0.86224 0.78785 0.83858 0.77471 1.21383 1.21714 1.20403 1.21410 0.96439 0.85871 0.90032 0.90367 1.23219 1.02907 0.92531 1.00500 1.22106 1.00644 0.99594 0.79937 1.48506 1.68786 1.09834 1.07533 1.19944 0.77392 0.85246 0.86127 1.90739 1.51926 1.83899 1.15018 1.20713 1.05142 0.91594 0.96729 1.19257 0.92306 0.95083 0.96085 1.21047 0.99587 0.95912 0.95581 1.20923 0.94153 0.98345 0.96477 1.20985 0.94614 0.99279 0.95545 1.98383 1.95634 1.62159 1.46428 1.17310 0.78652 0.98714 0.96206 1.91541 1.35923 1.94087 1.89055 1.20970 0.98168 0.98687 0.96847 1.23046 1.01270 0.79050 1.00577 0.94727 0.93976 0.97991 0.93625 0.90391 0.90481 0.91922 0.91738 0.87448 0.87333 0.84345 0.83868 0.83812 0.90956 0.91399 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.16 3.66 7.57 59.85 0.45 4.12 16 2 N -0.58 -13.75 2.96 -171.03 -0.51 -14.26 16 3 C -0.26 -6.88 9.60 -15.06 -0.14 -7.02 16 4 H 0.07 1.80 7.87 -52.49 -0.41 1.39 16 5 C 0.01 0.14 5.08 -17.43 -0.09 0.06 16 6 N -0.90 -25.33 10.77 55.49 0.60 -24.73 16 7 Si 0.91 21.29 29.58 -169.99 -5.03 16.26 16 8 H -0.29 -6.78 7.11 56.52 0.40 -6.38 16 9 H -0.29 -6.89 7.11 56.52 0.40 -6.49 16 10 H -0.28 -6.40 7.11 56.52 0.40 -6.00 16 11 C 0.17 3.25 3.53 -65.78 -0.23 3.02 16 12 H 0.08 1.50 7.96 -51.93 -0.41 1.08 16 13 C -0.15 -2.30 6.50 -24.89 -0.16 -2.46 16 14 C 0.10 1.16 6.49 -3.06 -0.02 1.14 16 15 N -0.61 -8.68 3.33 -170.52 -0.57 -9.25 16 16 C 0.53 7.24 7.84 -10.98 -0.09 7.15 16 17 O -0.54 -9.66 16.29 5.56 0.09 -9.57 16 18 C -0.10 -0.90 5.02 -29.03 -0.15 -1.05 16 19 C -0.03 -0.26 4.37 -104.63 -0.46 -0.72 16 20 C -0.10 -0.91 9.70 -39.58 -0.38 -1.30 16 21 C -0.08 -0.71 9.83 -39.56 -0.39 -1.10 16 22 C -0.08 -0.80 6.33 -39.43 -0.25 -1.05 16 23 Cl -0.05 -0.54 28.62 -51.86 -1.48 -2.03 16 24 C 0.11 1.24 7.28 -39.39 -0.29 0.96 16 25 F -0.13 -1.52 16.84 2.25 0.04 -1.48 16 26 C -0.13 -1.32 9.68 -39.52 -0.38 -1.70 16 27 C 0.08 1.48 6.47 -2.53 -0.02 1.47 16 28 H 0.03 0.86 7.33 -51.93 -0.38 0.48 16 29 H 0.04 1.06 7.38 -51.93 -0.38 0.68 16 30 H 0.00 0.03 6.38 -51.93 -0.33 -0.30 16 31 H 0.25 6.92 8.31 -40.82 -0.34 6.58 16 32 H 0.08 1.15 8.14 -51.93 -0.42 0.73 16 33 H 0.08 1.26 7.00 -51.93 -0.36 0.89 16 34 H 0.06 0.59 8.14 -51.93 -0.42 0.17 16 35 H 0.06 0.61 8.14 -51.93 -0.42 0.18 16 36 H 0.11 0.72 8.08 -51.93 -0.42 0.31 16 37 H 0.11 0.69 8.08 -51.93 -0.42 0.27 16 38 H 0.14 0.95 8.06 -52.49 -0.42 0.52 16 39 H 0.14 0.93 8.06 -52.49 -0.42 0.51 16 40 H 0.14 1.29 8.06 -52.48 -0.42 0.86 16 41 H 0.07 1.37 8.04 -51.93 -0.42 0.95 16 42 H 0.07 1.26 6.43 -51.93 -0.33 0.93 16 LS Contribution 366.43 15.07 5.52 5.52 Total: -1.00 -31.18 366.43 -9.47 -40.65 By element: Atomic # 1 Polarization: 2.91 SS G_CDS: -5.55 Total: -2.63 kcal Atomic # 6 Polarization: 4.11 SS G_CDS: -2.59 Total: 1.52 kcal Atomic # 7 Polarization: -47.77 SS G_CDS: -0.48 Total: -48.24 kcal Atomic # 8 Polarization: -9.66 SS G_CDS: 0.09 Total: -9.57 kcal Atomic # 9 Polarization: -1.52 SS G_CDS: 0.04 Total: -1.48 kcal Atomic # 14 Polarization: 21.29 SS G_CDS: -5.03 Total: 16.26 kcal Atomic # 17 Polarization: -0.54 SS G_CDS: -1.48 Total: -2.03 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -31.18 -9.47 -40.65 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000972421297.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.029 kcal (2) G-P(sol) polarization free energy of solvation -31.178 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.148 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.474 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.652 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.622 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds