Wall clock time and date at job start Sat Apr 11 2020 05:56:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46490 * 1 3 3 C 1.36948 * 119.99919 * 2 1 4 4 H 1.07999 * 119.99727 * 160.70352 * 3 2 1 5 5 C 1.38806 * 119.99937 * 340.43832 * 3 2 1 6 6 N 1.31626 * 120.00054 * 347.09350 * 5 3 2 7 7 Si 1.86803 * 120.00029 * 167.10019 * 5 3 2 8 8 H 1.48497 * 109.47111 * 89.99720 * 7 5 3 9 9 H 1.48504 * 109.46951 * 209.99494 * 7 5 3 10 10 H 1.48503 * 109.46975 * 329.99542 * 7 5 3 11 11 C 1.46497 * 120.00395 * 180.02562 * 2 1 3 12 12 H 1.09003 * 110.89134 * 180.69393 * 11 2 1 13 13 C 1.55160 * 111.00196 * 304.57783 * 11 2 1 14 14 C 1.54319 * 102.94188 * 153.57405 * 13 11 2 15 15 N 1.47022 * 107.27343 * 337.81048 * 14 13 11 16 16 C 1.34777 * 125.65172 * 178.99981 * 15 14 13 17 17 O 1.21275 * 120.00555 * 179.97438 * 16 15 14 18 18 C 1.50705 * 119.99839 * 359.96662 * 16 15 14 19 19 C 1.50700 * 109.47224 * 180.02562 * 18 16 15 20 20 C 1.38451 * 120.02416 * 269.73049 * 19 18 16 21 21 F 1.35109 * 120.01666 * 359.97438 * 20 19 18 22 22 C 1.38443 * 119.96543 * 179.72147 * 20 19 18 23 23 C 1.38229 * 119.99557 * 0.53186 * 22 20 19 24 24 C 1.38194 * 120.04040 * 359.75985 * 23 22 20 25 25 C 1.38295 * 120.01636 * 90.00213 * 19 18 16 26 26 Cl 1.73609 * 119.99944 * 0.02582 * 25 19 18 27 27 C 1.47470 * 108.72301 * 358.97250 * 15 14 13 28 28 H 1.08995 * 109.47505 * 84.82045 * 1 2 3 29 29 H 1.09006 * 109.47086 * 204.82221 * 1 2 3 30 30 H 1.09004 * 109.47038 * 324.81998 * 1 2 3 31 31 H 0.96992 * 119.99914 * 179.97438 * 6 5 3 32 32 H 1.08999 * 110.71669 * 271.93766 * 13 11 2 33 33 H 1.09002 * 110.71948 * 35.21418 * 13 11 2 34 34 H 1.09005 * 109.88435 * 97.22546 * 14 13 11 35 35 H 1.09003 * 109.88401 * 218.23370 * 14 13 11 36 36 H 1.08993 * 109.47313 * 300.00543 * 18 16 15 37 37 H 1.09004 * 109.46642 * 60.00205 * 18 16 15 38 38 H 1.07998 * 120.00413 * 180.27361 * 22 20 19 39 39 H 1.08007 * 119.97730 * 179.74832 * 23 22 20 40 40 H 1.08003 * 119.98157 * 179.97438 * 24 23 22 41 41 H 1.09003 * 110.34708 * 265.25600 * 27 15 14 42 42 H 1.08998 * 110.40693 * 142.91702 * 27 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1496 1.1860 0.0000 4 1 3.1841 1.2123 0.3091 5 6 1.5157 2.3534 -0.4025 6 7 0.3544 2.2927 -1.0193 7 14 2.3106 4.0106 -0.0690 8 1 3.1798 4.3821 -1.2142 9 1 1.2545 5.0401 0.1051 10 1 3.1292 3.9272 1.1672 11 6 2.1975 -1.2687 -0.0006 12 1 3.2737 -1.0961 0.0118 13 6 1.7637 -2.1618 1.1917 14 6 2.0558 -3.5879 0.6794 15 7 2.0776 -3.5282 -0.7894 16 6 2.3200 -4.5661 -1.6143 17 8 2.3124 -4.4007 -2.8157 18 6 2.6008 -5.9324 -1.0437 19 6 2.8373 -6.9075 -2.1682 20 6 1.7753 -7.6122 -2.7089 21 9 0.5263 -7.4264 -2.2284 22 6 1.9931 -8.5034 -3.7457 23 6 3.2719 -8.6974 -4.2331 24 6 4.3329 -7.9985 -3.6894 25 6 4.1162 -7.1031 -2.6568 26 17 5.4498 -6.2258 -1.9743 27 6 1.7897 -2.1448 -1.2113 28 1 -0.3634 0.0928 -1.0234 29 1 -0.3633 -0.9328 0.4314 30 1 -0.3633 0.8400 0.5921 31 1 -0.0887 3.1084 -1.3002 32 1 2.3602 -1.9402 2.0766 33 1 0.7011 -2.0372 1.4003 34 1 3.0237 -3.9244 1.0511 35 1 1.2733 -4.2694 1.0135 36 1 3.4868 -5.8867 -0.4106 37 1 1.7472 -6.2610 -0.4509 38 1 1.1644 -9.0501 -4.1710 39 1 3.4421 -9.3957 -5.0393 40 1 5.3318 -8.1511 -4.0706 41 1 0.7272 -2.0268 -1.4242 42 1 2.3842 -1.8828 -2.0865 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000972791232.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 05:56:48 Heat of formation + Delta-G solvation = -28.486132 kcal Electronic energy + Delta-G solvation = -27132.404610 eV Core-core repulsion = 23053.789770 eV Total energy + Delta-G solvation = -4078.614839 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 340.109 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -49.16977 -40.12069 -39.15778 -37.37486 -36.71410 -34.81257 -33.23643 -31.64061 -30.72514 -29.78683 -28.65198 -27.16105 -26.06275 -23.71555 -23.15530 -22.40057 -22.05072 -19.32809 -19.05366 -17.99058 -17.19415 -17.04716 -17.00438 -16.20825 -15.83544 -15.77780 -15.07086 -14.92004 -14.77123 -14.19511 -13.84491 -13.72118 -13.42015 -13.33136 -13.20062 -12.82895 -12.60319 -12.38659 -12.26426 -12.00996 -11.80104 -11.70491 -11.62121 -11.47891 -11.11125 -10.90717 -10.80249 -10.51598 -10.43540 -10.27930 -9.91256 -9.82514 -9.72449 -9.08814 -8.98492 -8.60109 -8.30842 -6.85490 -5.76468 -3.21359 0.68313 0.74577 1.77845 2.81917 2.99813 3.33890 3.37202 3.43587 3.45274 3.94476 4.19175 4.41991 4.45751 4.51549 4.69394 4.86205 4.99301 5.04233 5.11381 5.28434 5.31124 5.33369 5.49518 5.55155 5.63137 5.69517 5.77172 5.80474 5.86153 5.89415 6.00805 6.29962 6.38460 6.39104 6.53414 6.63040 6.78614 6.86774 7.37087 7.69204 7.78586 7.80109 8.32140 8.37811 9.18295 9.80816 10.27881 11.28246 Molecular weight = 340.11amu Principal moments of inertia in cm(-1) A = 0.019730 B = 0.002627 C = 0.002517 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1418.820981 B =10654.143237 C =11119.972159 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.161 3.839 2 N -0.586 5.586 3 C -0.259 4.259 4 H 0.072 0.928 5 C 0.002 3.998 6 N -0.906 5.906 7 Si 0.907 3.093 8 H -0.287 1.287 9 H -0.290 1.290 10 H -0.280 1.280 11 C 0.173 3.827 12 H 0.078 0.922 13 C -0.153 4.153 14 C 0.102 3.898 15 N -0.613 5.613 16 C 0.531 3.469 17 O -0.537 6.537 18 C -0.106 4.106 19 C -0.088 4.088 20 C 0.125 3.875 21 F -0.129 7.129 22 C -0.149 4.149 23 C -0.081 4.081 24 C -0.121 4.121 25 C 0.003 3.997 26 Cl -0.052 7.052 27 C 0.088 3.912 28 H 0.030 0.970 29 H 0.001 0.999 30 H 0.048 0.952 31 H 0.253 0.747 32 H 0.076 0.924 33 H 0.078 0.922 34 H 0.063 0.937 35 H 0.062 0.938 36 H 0.111 0.889 37 H 0.107 0.893 38 H 0.142 0.858 39 H 0.142 0.858 40 H 0.140 0.860 41 H 0.067 0.933 42 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.798 -24.432 -0.061 25.110 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 N -0.306 5.306 3 C -0.388 4.388 4 H 0.089 0.911 5 C -0.196 4.196 6 N -0.551 5.551 7 Si 0.737 3.263 8 H -0.214 1.214 9 H -0.216 1.216 10 H -0.205 1.205 11 C 0.062 3.938 12 H 0.096 0.904 13 C -0.193 4.193 14 C -0.022 4.022 15 N -0.347 5.347 16 C 0.318 3.682 17 O -0.414 6.414 18 C -0.145 4.145 19 C -0.090 4.090 20 C 0.105 3.895 21 F -0.108 7.108 22 C -0.168 4.168 23 C -0.099 4.099 24 C -0.139 4.139 25 C -0.024 4.024 26 Cl -0.022 7.022 27 C -0.037 4.037 28 H 0.048 0.952 29 H 0.019 0.981 30 H 0.067 0.933 31 H 0.064 0.936 32 H 0.095 0.905 33 H 0.097 0.903 34 H 0.082 0.918 35 H 0.080 0.920 36 H 0.129 0.871 37 H 0.125 0.875 38 H 0.160 0.840 39 H 0.160 0.840 40 H 0.158 0.842 41 H 0.086 0.914 42 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 5.742 -24.108 -0.718 24.792 hybrid contribution 0.144 1.046 0.245 1.084 sum 5.886 -23.062 -0.473 23.806 Atomic orbital electron populations 1.20840 0.82220 0.95671 0.99631 1.43900 1.02022 0.99847 1.84842 1.19246 0.96526 0.84614 1.38455 0.91068 1.24999 0.97558 0.98498 0.98543 1.70096 1.16874 1.26826 1.41310 0.86218 0.78269 0.83722 0.78071 1.21398 1.21562 1.20514 1.21439 0.96353 0.85765 0.90201 0.90427 1.23203 1.02947 0.92810 1.00380 1.22056 1.00709 0.99310 0.80080 1.48499 1.69312 1.09803 1.07064 1.19790 0.77265 0.84760 0.86368 1.90715 1.51869 1.84349 1.14463 1.20650 1.05436 0.91731 0.96716 1.19151 0.91459 0.98777 0.99651 1.17275 0.79120 0.97695 0.95380 1.91528 1.38114 1.94164 1.86970 1.21215 0.99057 0.99646 0.96887 1.20938 0.91081 0.98734 0.99145 1.21080 1.00722 0.96406 0.95728 1.20521 0.88323 0.96455 0.97062 1.98393 1.44863 1.75102 1.83889 1.23139 1.01208 0.78759 1.00558 0.95194 0.98058 0.93318 0.93632 0.90494 0.90329 0.91822 0.92004 0.87113 0.87464 0.84024 0.83991 0.84167 0.91442 0.90943 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.16 3.86 7.71 59.84 0.46 4.32 16 2 N -0.59 -14.25 2.97 -171.03 -0.51 -14.76 16 3 C -0.26 -6.97 9.66 -15.06 -0.15 -7.11 16 4 H 0.07 1.86 7.82 -52.49 -0.41 1.45 16 5 C 0.00 0.07 5.11 -17.43 -0.09 -0.02 16 6 N -0.91 -26.18 10.50 55.49 0.58 -25.60 16 7 Si 0.91 21.64 29.57 -169.99 -5.03 16.61 16 8 H -0.29 -6.88 7.11 56.52 0.40 -6.48 16 9 H -0.29 -6.96 7.11 56.52 0.40 -6.56 16 10 H -0.28 -6.50 7.11 56.52 0.40 -6.10 16 11 C 0.17 3.43 3.54 -65.78 -0.23 3.20 16 12 H 0.08 1.55 7.92 -51.93 -0.41 1.14 16 13 C -0.15 -2.38 6.49 -24.90 -0.16 -2.54 16 14 C 0.10 1.34 6.49 -3.07 -0.02 1.32 16 15 N -0.61 -10.08 3.33 -170.48 -0.57 -10.65 16 16 C 0.53 8.81 7.84 -10.98 -0.09 8.72 16 17 O -0.54 -10.97 16.29 5.56 0.09 -10.88 16 18 C -0.11 -1.30 4.45 -29.03 -0.13 -1.43 16 19 C -0.09 -1.09 4.38 -104.52 -0.46 -1.55 16 20 C 0.12 1.49 7.24 -39.43 -0.29 1.20 16 21 F -0.13 -1.66 16.48 2.25 0.04 -1.63 16 22 C -0.15 -1.37 10.03 -39.51 -0.40 -1.76 16 23 C -0.08 -0.62 10.04 -39.60 -0.40 -1.02 16 24 C -0.12 -1.08 9.83 -39.54 -0.39 -1.47 16 25 C 0.00 0.04 6.31 -39.51 -0.25 -0.21 16 26 Cl -0.05 -0.58 27.29 -51.86 -1.42 -2.00 16 27 C 0.09 1.72 6.49 -2.50 -0.02 1.71 16 28 H 0.03 0.79 7.43 -51.93 -0.39 0.40 16 29 H 0.00 0.02 6.17 -51.93 -0.32 -0.30 16 30 H 0.05 1.26 7.10 -51.93 -0.37 0.89 16 31 H 0.25 7.12 8.31 -40.82 -0.34 6.78 16 32 H 0.08 1.10 8.14 -51.93 -0.42 0.67 16 33 H 0.08 1.28 6.17 -51.93 -0.32 0.96 16 34 H 0.06 0.70 8.14 -51.93 -0.42 0.28 16 35 H 0.06 0.69 8.14 -51.93 -0.42 0.27 16 36 H 0.11 1.17 6.90 -51.93 -0.36 0.81 16 37 H 0.11 1.14 7.63 -51.93 -0.40 0.74 16 38 H 0.14 0.96 8.06 -52.49 -0.42 0.54 16 39 H 0.14 0.63 8.06 -52.48 -0.42 0.21 16 40 H 0.14 0.94 8.06 -52.48 -0.42 0.51 16 41 H 0.07 1.43 7.20 -51.93 -0.37 1.06 16 42 H 0.07 1.57 8.04 -51.93 -0.42 1.15 16 LS Contribution 362.66 15.07 5.47 5.47 Total: -1.00 -32.28 362.66 -9.37 -41.65 By element: Atomic # 1 Polarization: 3.87 SS G_CDS: -5.43 Total: -1.57 kcal Atomic # 6 Polarization: 5.94 SS G_CDS: -2.59 Total: 3.35 kcal Atomic # 7 Polarization: -50.51 SS G_CDS: -0.49 Total: -51.01 kcal Atomic # 8 Polarization: -10.97 SS G_CDS: 0.09 Total: -10.88 kcal Atomic # 9 Polarization: -1.66 SS G_CDS: 0.04 Total: -1.63 kcal Atomic # 14 Polarization: 21.64 SS G_CDS: -5.03 Total: 16.61 kcal Atomic # 17 Polarization: -0.58 SS G_CDS: -1.42 Total: -2.00 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -32.28 -9.37 -41.65 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000972791232.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.163 kcal (2) G-P(sol) polarization free energy of solvation -32.279 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.116 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.371 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.650 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.486 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds