Wall clock time and date at job start Sat Apr 11 2020 05:57:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 H 1.09002 * 109.46854 * 2 1 4 4 C 1.50695 * 109.46935 * 119.99809 * 2 1 3 5 5 O 1.21280 * 120.00468 * 119.99846 * 4 2 1 6 6 N 1.34781 * 119.99972 * 299.99704 * 4 2 1 7 7 C 1.46494 * 119.99956 * 0.02562 * 6 4 2 8 8 C 1.46505 * 120.00004 * 179.97438 * 6 4 2 9 9 C 1.53001 * 109.46518 * 90.00611 * 8 6 4 10 10 O 1.42893 * 109.47328 * 65.00170 * 9 8 6 11 11 C 1.35925 * 117.00202 * 179.97438 * 10 9 8 12 12 C 1.38724 * 120.03845 * 359.72315 * 11 10 9 13 13 C 1.38149 * 119.95362 * 179.78749 * 12 11 10 14 14 C 1.38368 * 120.04253 * 0.46969 * 13 12 11 15 15 Cl 1.73595 * 119.95697 * 179.76599 * 14 13 12 16 16 C 1.38371 * 120.08541 * 359.78171 * 14 13 12 17 17 C 1.38139 * 120.04099 * 359.97438 * 16 14 13 18 18 N 1.46496 * 109.47303 * 239.99648 * 2 1 3 19 19 C 1.46498 * 120.00254 * 300.00186 * 18 2 1 20 20 C 1.36939 * 120.00185 * 120.00103 * 18 2 1 21 21 H 1.08005 * 119.99866 * 21.81682 * 20 18 2 22 22 C 1.38806 * 120.00231 * 201.82020 * 20 18 2 23 23 N 1.31618 * 120.00190 * 11.29621 * 22 20 18 24 24 Si 1.86800 * 119.99969 * 191.30192 * 22 20 18 25 25 H 1.48495 * 109.47186 * 359.97438 * 24 22 20 26 26 H 1.48502 * 109.47428 * 119.99788 * 24 22 20 27 27 H 1.48503 * 109.46954 * 239.99757 * 24 22 20 28 28 H 1.09001 * 109.47410 * 300.00351 * 1 2 3 29 29 H 1.09004 * 109.47138 * 60.00282 * 1 2 3 30 30 H 1.09005 * 109.47363 * 179.97438 * 1 2 3 31 31 H 1.08998 * 109.47994 * 89.99573 * 7 6 4 32 32 H 1.09007 * 109.47072 * 209.99705 * 7 6 4 33 33 H 1.09005 * 109.47016 * 329.99274 * 7 6 4 34 34 H 1.08999 * 109.46963 * 210.00046 * 8 6 4 35 35 H 1.08996 * 109.46902 * 330.00495 * 8 6 4 36 36 H 1.09005 * 109.46802 * 184.99845 * 9 8 6 37 37 H 1.09001 * 109.47054 * 304.99585 * 9 8 6 38 38 H 1.07992 * 120.02068 * 0.02562 * 12 11 10 39 39 H 1.07996 * 119.97805 * 180.22915 * 13 12 11 40 40 H 1.07990 * 119.97852 * 179.97438 * 16 14 13 41 41 H 1.07997 * 120.02140 * 179.97438 * 17 16 14 42 42 H 1.08999 * 109.47268 * 95.19173 * 19 18 2 43 43 H 1.09004 * 109.47600 * 215.19935 * 19 18 2 44 44 H 1.09000 * 109.47008 * 335.19474 * 19 18 2 45 45 H 0.96998 * 120.00415 * 179.97438 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0323 -0.7104 1.2305 5 8 2.7295 -1.6965 1.1193 6 7 1.7067 -0.2498 2.4546 7 6 0.8641 0.9410 2.5889 8 6 2.1945 -0.9407 3.6508 9 6 3.5424 -0.3487 4.0675 10 8 3.3629 1.0123 4.4638 11 6 4.4708 1.6891 4.8665 12 6 5.7039 1.0540 4.8851 13 6 6.8295 1.7448 5.2906 14 6 6.7258 3.0664 5.6871 15 17 8.1407 3.9305 6.2019 16 6 5.4958 3.7000 5.6742 17 6 4.3688 3.0141 5.2646 18 7 2.0183 -0.6907 -1.1961 19 6 1.6645 -2.0932 -1.4279 20 6 2.8057 -0.0252 -2.0975 21 1 3.3540 0.8532 -1.7905 22 6 2.8990 -0.4796 -3.4058 23 7 2.0710 -1.4052 -3.8417 24 14 4.2000 0.2224 -4.5477 25 1 4.9985 1.2419 -3.8210 26 1 5.0938 -0.8694 -5.0105 27 1 3.5415 0.8534 -5.7197 28 1 -0.3634 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3634 -1.0277 -0.0005 31 1 -0.1838 0.6429 2.6224 32 1 1.1218 1.4667 3.5084 33 1 1.0273 1.5997 1.7359 34 1 1.4764 -0.8150 4.4612 35 1 2.3152 -2.0020 3.4336 36 1 3.9475 -0.9200 4.9028 37 1 4.2346 -0.3941 3.2267 38 1 5.7846 0.0215 4.5793 39 1 7.7904 1.2519 5.3017 40 1 5.4168 4.7314 5.9844 41 1 3.4089 3.5088 5.2550 42 1 0.7899 -2.1449 -2.0763 43 1 2.5007 -2.6051 -1.9042 44 1 1.4395 -2.5734 -0.4756 45 1 2.1360 -1.7225 -4.7560 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000068972178.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 05:57:35 Heat of formation + Delta-G solvation = -13.869350 kcal Electronic energy + Delta-G solvation = -27493.885954 eV Core-core repulsion = 23539.365250 eV Total energy + Delta-G solvation = -3954.520703 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 340.134 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -40.48641 -39.54460 -37.94866 -36.47211 -35.61936 -35.04475 -32.36265 -31.54054 -30.74564 -29.53131 -28.60089 -26.52241 -25.89105 -24.63864 -23.58909 -22.83566 -22.17383 -20.81870 -18.84421 -18.35644 -17.05212 -16.76500 -16.58379 -16.32997 -15.94174 -15.34458 -15.14819 -14.80415 -14.57636 -13.95499 -13.87021 -13.83694 -13.47188 -13.29430 -13.06075 -12.65520 -12.61146 -12.49563 -12.29453 -12.19332 -11.91432 -11.80224 -11.44072 -11.37137 -11.07458 -10.95910 -10.85050 -10.79747 -10.71029 -10.57952 -10.25610 -9.99421 -9.83371 -9.43134 -9.04105 -8.48821 -8.41193 -8.36910 -6.74493 -5.68439 -3.14825 0.91976 0.95213 1.91185 2.90897 3.25621 3.31290 3.33377 3.40947 3.47324 3.49422 4.41618 4.49666 4.51164 4.78505 4.84899 4.87442 5.01317 5.05258 5.18317 5.23625 5.31709 5.46211 5.49641 5.55353 5.58614 5.62106 5.72121 5.75990 5.80151 5.93720 5.95809 5.98719 6.04013 6.27354 6.31392 6.52571 6.75850 6.86654 7.01891 7.10866 7.57475 7.73553 7.79984 7.90034 8.39912 8.79464 9.26572 9.87910 10.36006 11.35644 Molecular weight = 340.13amu Principal moments of inertia in cm(-1) A = 0.011606 B = 0.002723 C = 0.002364 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2411.962719 B =10279.414711 C =11841.859150 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C 0.162 3.838 3 H 0.086 0.914 4 C 0.494 3.506 5 O -0.526 6.526 6 N -0.624 5.624 7 C 0.084 3.916 8 C 0.121 3.879 9 C 0.041 3.959 10 O -0.305 6.305 11 C 0.143 3.857 12 C -0.198 4.198 13 C -0.068 4.068 14 C -0.078 4.078 15 Cl -0.077 7.077 16 C -0.071 4.071 17 C -0.143 4.143 18 N -0.574 5.574 19 C 0.172 3.828 20 C -0.256 4.256 21 H 0.067 0.933 22 C 0.004 3.996 23 N -0.905 5.905 24 Si 0.906 3.094 25 H -0.278 1.278 26 H -0.289 1.289 27 H -0.290 1.290 28 H 0.055 0.945 29 H 0.065 0.935 30 H 0.050 0.950 31 H 0.054 0.946 32 H 0.069 0.931 33 H 0.074 0.926 34 H 0.082 0.918 35 H 0.103 0.897 36 H 0.069 0.931 37 H 0.072 0.928 38 H 0.137 0.863 39 H 0.135 0.865 40 H 0.138 0.862 41 H 0.140 0.860 42 H 0.025 0.975 43 H 0.041 0.959 44 H 0.004 0.996 45 H 0.252 0.748 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.898 7.823 22.770 24.151 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.225 4.225 2 C 0.048 3.952 3 H 0.104 0.896 4 C 0.281 3.719 5 O -0.400 6.400 6 N -0.361 5.361 7 C -0.059 4.059 8 C -0.003 4.003 9 C -0.035 4.035 10 O -0.218 6.218 11 C 0.097 3.903 12 C -0.217 4.217 13 C -0.086 4.086 14 C -0.105 4.105 15 Cl -0.048 7.048 16 C -0.089 4.089 17 C -0.162 4.162 18 N -0.294 5.294 19 C 0.028 3.972 20 C -0.385 4.385 21 H 0.085 0.915 22 C -0.194 4.194 23 N -0.550 5.550 24 Si 0.736 3.264 25 H -0.204 1.204 26 H -0.216 1.216 27 H -0.217 1.217 28 H 0.074 0.926 29 H 0.084 0.916 30 H 0.069 0.931 31 H 0.072 0.928 32 H 0.088 0.912 33 H 0.093 0.907 34 H 0.100 0.900 35 H 0.121 0.879 36 H 0.087 0.913 37 H 0.090 0.910 38 H 0.155 0.845 39 H 0.152 0.848 40 H 0.156 0.844 41 H 0.158 0.842 42 H 0.044 0.956 43 H 0.060 0.940 44 H 0.023 0.977 45 H 0.062 0.938 Dipole moment (debyes) X Y Z Total from point charges 2.201 7.302 22.486 23.744 hybrid contribution 1.088 0.224 -0.614 1.269 sum 3.289 7.527 21.872 23.364 Atomic orbital electron populations 1.22472 0.96369 1.01998 1.01681 1.20199 0.93496 0.95801 0.85670 0.89586 1.22917 0.79396 0.84900 0.84672 1.90618 1.37054 1.26228 1.86056 1.48143 1.52757 1.29858 1.05387 1.21898 0.93792 0.87253 1.02978 1.21392 0.93041 0.97714 0.88196 1.23492 1.00681 0.79701 0.99663 1.86091 1.30576 1.26138 1.79031 1.19124 0.86103 0.91937 0.93137 1.21290 0.91940 1.01592 1.06838 1.20849 0.99086 0.92284 0.96429 1.20761 0.88452 0.93728 1.07527 1.98360 1.40021 1.76812 1.89600 1.20842 0.90055 1.00118 0.97929 1.20382 0.99571 0.92079 1.04134 1.43668 1.57849 1.08583 1.19334 1.20725 0.99352 0.82803 0.94335 1.19242 1.19647 1.10235 0.89391 0.91491 1.24965 0.98670 0.99171 0.96597 1.70107 1.36818 1.32097 1.15928 0.86160 0.81210 0.78289 0.80720 1.20352 1.21580 1.21675 0.92597 0.91588 0.93061 0.92793 0.91214 0.90721 0.89967 0.87907 0.91285 0.91011 0.84481 0.84761 0.84381 0.84215 0.95633 0.94009 0.97703 0.93805 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.87 8.83 37.16 0.33 -2.54 16 2 C 0.16 3.32 2.32 -69.09 -0.16 3.16 16 3 H 0.09 1.71 7.12 -51.93 -0.37 1.34 16 4 C 0.49 9.48 6.78 -10.99 -0.07 9.40 16 5 O -0.53 -12.05 14.18 5.56 0.08 -11.97 16 6 N -0.62 -8.85 2.84 -181.57 -0.52 -9.36 16 7 C 0.08 0.92 8.62 59.84 0.52 1.44 16 8 C 0.12 1.39 5.81 -4.04 -0.02 1.37 16 9 C 0.04 0.45 5.08 37.16 0.19 0.64 16 10 O -0.31 -3.44 8.96 -19.50 -0.17 -3.62 16 11 C 0.14 1.56 6.69 -39.22 -0.26 1.30 16 12 C -0.20 -2.05 9.04 -39.43 -0.36 -2.41 16 13 C -0.07 -0.66 9.82 -39.57 -0.39 -1.05 16 14 C -0.08 -0.77 6.32 -39.48 -0.25 -1.01 16 15 Cl -0.08 -0.71 28.95 -51.86 -1.50 -2.21 16 16 C -0.07 -0.64 9.82 -39.57 -0.39 -1.03 16 17 C -0.14 -1.36 9.99 -39.44 -0.39 -1.76 16 18 N -0.57 -14.95 2.59 -174.82 -0.45 -15.40 16 19 C 0.17 4.58 7.45 59.85 0.45 5.02 16 20 C -0.26 -7.21 9.61 -15.06 -0.14 -7.35 16 21 H 0.07 1.84 7.80 -52.48 -0.41 1.43 16 22 C 0.00 0.12 5.14 -17.43 -0.09 0.03 16 23 N -0.90 -26.88 10.54 55.49 0.59 -26.30 16 24 Si 0.91 22.32 29.57 -169.99 -5.03 17.30 16 25 H -0.28 -6.69 7.11 56.52 0.40 -6.29 16 26 H -0.29 -7.19 7.11 56.52 0.40 -6.79 16 27 H -0.29 -7.09 7.11 56.52 0.40 -6.69 16 28 H 0.06 0.74 4.53 -51.93 -0.24 0.51 16 29 H 0.07 1.22 8.14 -51.93 -0.42 0.79 16 30 H 0.05 0.94 7.67 -51.93 -0.40 0.54 16 31 H 0.05 0.52 6.95 -51.93 -0.36 0.16 16 32 H 0.07 0.66 7.12 -51.92 -0.37 0.29 16 33 H 0.07 0.85 6.01 -51.93 -0.31 0.54 16 34 H 0.08 0.74 8.07 -51.93 -0.42 0.32 16 35 H 0.10 1.28 7.42 -51.93 -0.39 0.90 16 36 H 0.07 0.60 7.65 -51.93 -0.40 0.20 16 37 H 0.07 0.97 7.67 -51.93 -0.40 0.57 16 38 H 0.14 1.30 6.30 -52.49 -0.33 0.97 16 39 H 0.13 1.11 8.06 -52.49 -0.42 0.68 16 40 H 0.14 0.95 8.06 -52.49 -0.42 0.53 16 41 H 0.14 1.10 8.06 -52.49 -0.42 0.67 16 42 H 0.03 0.71 7.37 -51.93 -0.38 0.33 16 43 H 0.04 1.21 7.22 -51.93 -0.37 0.84 16 44 H 0.00 0.11 6.43 -51.93 -0.33 -0.22 16 45 H 0.25 7.21 8.31 -40.82 -0.34 6.87 16 LS Contribution 376.24 15.07 5.67 5.67 Total: -1.00 -33.52 376.24 -8.69 -42.21 By element: Atomic # 1 Polarization: 4.79 SS G_CDS: -6.30 Total: -1.52 kcal Atomic # 6 Polarization: 6.25 SS G_CDS: -1.05 Total: 5.20 kcal Atomic # 7 Polarization: -50.68 SS G_CDS: -0.38 Total: -51.06 kcal Atomic # 8 Polarization: -15.49 SS G_CDS: -0.10 Total: -15.59 kcal Atomic # 14 Polarization: 22.32 SS G_CDS: -5.03 Total: 17.30 kcal Atomic # 17 Polarization: -0.71 SS G_CDS: -1.50 Total: -2.21 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -33.52 -8.69 -42.21 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000068972178.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.341 kcal (2) G-P(sol) polarization free energy of solvation -33.517 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.176 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.693 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.211 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.869 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds