Wall clock time and date at job start Sat Apr 11 2020 05:58:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 N 1.30836 * 125.89046 * 2 1 4 4 N 1.40074 * 108.23838 * 180.29144 * 3 2 1 5 5 C 1.46499 * 126.04040 * 179.71875 * 4 3 2 6 6 C 1.34986 * 107.93000 * 359.72161 * 4 3 2 7 7 Cl 1.73600 * 126.14673 * 180.02562 * 6 4 3 8 8 C 1.35471 * 107.71254 * 0.02562 * 6 4 3 9 9 C 1.50698 * 126.04976 * 180.02562 * 8 6 4 10 10 C 1.50708 * 109.47240 * 90.02260 * 9 8 6 11 11 O 1.21280 * 119.99355 * 359.97438 * 10 9 8 12 12 N 1.34771 * 120.00223 * 179.97438 * 10 9 8 13 13 C 1.47027 * 125.64859 * 0.03911 * 12 10 9 14 14 C 1.54318 * 107.27142 * 181.02411 * 13 12 10 15 15 C 1.55154 * 102.94427 * 22.19621 * 14 13 12 16 16 H 1.08998 * 111.00998 * 82.56851 * 15 14 13 17 17 N 1.46501 * 111.03677 * 206.41066 * 15 14 13 18 18 C 1.46498 * 120.00212 * 55.39521 * 17 15 14 19 19 C 1.36936 * 119.99648 * 235.38891 * 17 15 14 20 20 H 1.07996 * 120.00444 * 325.90941 * 19 17 15 21 21 C 1.38813 * 119.99553 * 145.91145 * 19 17 15 22 22 N 1.31617 * 119.99958 * 156.97324 * 21 19 17 23 23 Si 1.86803 * 120.00208 * 336.97002 * 21 19 17 24 24 H 1.48497 * 109.46978 * 95.37773 * 23 21 19 25 25 H 1.48502 * 109.47124 * 215.38167 * 23 21 19 26 26 H 1.48499 * 109.46842 * 335.38175 * 23 21 19 27 27 C 1.47422 * 125.65157 * 180.02562 * 12 10 9 28 28 H 1.09000 * 109.46620 * 270.16982 * 1 2 3 29 29 H 1.08995 * 109.46923 * 30.16842 * 1 2 3 30 30 H 1.08996 * 109.46831 * 150.17174 * 1 2 3 31 31 H 1.08999 * 109.47152 * 270.00296 * 5 4 3 32 32 H 1.09003 * 109.46837 * 30.00435 * 5 4 3 33 33 H 1.09004 * 109.47570 * 150.00135 * 5 4 3 34 34 H 1.09002 * 109.46976 * 330.02170 * 9 8 6 35 35 H 1.09000 * 109.47337 * 210.02042 * 9 8 6 36 36 H 1.09002 * 109.88037 * 300.44781 * 13 12 10 37 37 H 1.09000 * 109.88086 * 61.45104 * 13 12 10 38 38 H 1.09003 * 110.71897 * 263.83046 * 14 13 12 39 39 H 1.09004 * 110.72105 * 140.55986 * 14 13 12 40 40 H 1.08996 * 109.47353 * 91.67908 * 18 17 15 41 41 H 1.09001 * 109.46877 * 211.68564 * 18 17 15 42 42 H 1.09009 * 109.47029 * 331.68256 * 18 17 15 43 43 H 0.97001 * 120.00275 * 179.97438 * 22 21 19 44 44 H 1.09000 * 110.36721 * 37.06304 * 27 12 10 45 45 H 1.09007 * 110.45836 * 274.79266 * 27 12 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2741 1.0600 0.0000 4 7 3.6088 0.6352 -0.0068 5 6 4.7894 1.5027 -0.0149 6 6 3.6154 -0.7146 -0.0046 7 17 5.0222 -1.7318 -0.0101 8 6 2.3269 -1.1331 0.0027 9 6 1.8598 -2.5658 0.0080 10 6 1.7107 -3.0403 1.4307 11 8 1.9597 -2.2891 2.3496 12 7 1.3006 -4.2994 1.6816 13 6 0.9672 -5.3102 0.6673 14 6 0.5262 -6.5843 1.4180 15 6 0.0941 -6.0388 2.8047 16 1 -0.9256 -5.6550 2.7732 17 7 0.2341 -7.0652 3.8405 18 6 1.5244 -7.7281 4.0452 19 6 -0.8411 -7.4049 4.6176 20 1 -1.5672 -6.6543 4.8927 21 6 -0.9976 -8.7141 5.0516 22 7 -1.7190 -8.9706 6.1222 23 14 -0.1845 -10.1118 4.1163 24 1 1.1175 -10.4402 4.7504 25 1 -1.0657 -11.3068 4.1474 26 1 0.0410 -9.6995 2.7077 27 6 1.1122 -4.8913 3.0186 28 1 -0.3632 0.0030 1.0277 29 1 -0.3633 0.8884 -0.5164 30 1 -0.3633 -0.8915 -0.5112 31 1 5.0763 1.7161 -1.0445 32 1 4.5580 2.4358 0.4988 33 1 5.6121 1.0015 0.4952 34 1 2.5910 -3.1882 -0.5078 35 1 0.8986 -2.6365 -0.5011 36 1 0.1532 -4.9498 0.0384 37 1 1.8429 -5.5228 0.0541 38 1 1.3593 -7.2799 1.5197 39 1 -0.3142 -7.0590 0.9114 40 1 2.0958 -7.1862 4.7988 41 1 1.3578 -8.7514 4.3818 42 1 2.0797 -7.7400 3.1072 43 1 -1.8287 -9.8855 6.4253 44 1 0.7088 -4.1499 3.7083 45 1 2.0551 -5.2866 3.3966 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000971869310.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 05:58:35 Heat of formation + Delta-G solvation = 74.484588 kcal Electronic energy + Delta-G solvation = -27554.154770 eV Core-core repulsion = 23635.758133 eV Total energy + Delta-G solvation = -3918.396638 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 340.141 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -41.66271 -39.70862 -37.54213 -37.16872 -34.97253 -34.53032 -32.25276 -31.69913 -30.26007 -29.94399 -28.64019 -27.50581 -26.23119 -25.24415 -23.49434 -22.43365 -21.18515 -20.24475 -19.43715 -18.91928 -17.17387 -17.09190 -16.96128 -16.21362 -15.97606 -15.48847 -15.05025 -14.89512 -14.37781 -13.89924 -13.80113 -13.61836 -13.31054 -13.19035 -13.08402 -12.92588 -12.86018 -12.62461 -12.49996 -12.42226 -12.31344 -11.97996 -11.93998 -11.84765 -11.71523 -11.44696 -10.98488 -10.80143 -10.77391 -10.55946 -10.17637 -9.95625 -9.69564 -9.56750 -9.36072 -8.64747 -8.58365 -8.36140 -6.96089 -6.03959 -3.43939 1.17762 1.39137 2.31111 2.34342 2.83729 3.27234 3.27728 3.43039 3.47132 4.06457 4.47198 4.63999 4.69974 4.75851 4.77557 4.78978 4.86312 5.03137 5.04591 5.14092 5.19666 5.32055 5.35696 5.45304 5.49246 5.58011 5.67363 5.70255 5.71617 5.74263 5.90544 6.07541 6.23206 6.29152 6.32420 6.40232 6.42553 6.49429 6.62535 6.67947 6.78612 7.31802 7.76646 7.95610 8.30247 8.39458 8.89593 9.64525 10.01635 11.11388 Molecular weight = 340.14amu Principal moments of inertia in cm(-1) A = 0.022929 B = 0.002537 C = 0.002433 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1220.857467 B =11035.585229 C =11507.982576 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 C 0.100 3.900 3 N -0.276 5.276 4 N -0.368 5.368 5 C 0.098 3.902 6 C 0.137 3.863 7 Cl -0.005 7.005 8 C -0.189 4.189 9 C -0.060 4.060 10 C 0.527 3.473 11 O -0.535 6.535 12 N -0.616 5.616 13 C 0.103 3.897 14 C -0.158 4.158 15 C 0.173 3.827 16 H 0.088 0.912 17 N -0.596 5.596 18 C 0.107 3.893 19 C -0.273 4.273 20 H 0.083 0.917 21 C 0.034 3.966 22 N -0.898 5.898 23 Si 0.886 3.114 24 H -0.287 1.287 25 H -0.303 1.303 26 H -0.270 1.270 27 C 0.090 3.910 28 H 0.084 0.916 29 H 0.076 0.924 30 H 0.080 0.920 31 H 0.078 0.922 32 H 0.095 0.905 33 H 0.088 0.912 34 H 0.098 0.902 35 H 0.104 0.896 36 H 0.066 0.934 37 H 0.062 0.938 38 H 0.074 0.926 39 H 0.080 0.920 40 H 0.020 0.980 41 H 0.043 0.957 42 H 0.035 0.965 43 H 0.264 0.736 44 H 0.074 0.926 45 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.280 16.129 -18.602 27.082 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.066 4.066 3 N -0.099 5.099 4 N -0.152 5.152 5 C -0.043 4.043 6 C -0.016 4.016 7 Cl 0.023 6.977 8 C -0.202 4.202 9 C -0.101 4.101 10 C 0.315 3.685 11 O -0.412 6.412 12 N -0.351 5.351 13 C -0.021 4.021 14 C -0.198 4.198 15 C 0.063 3.937 16 H 0.106 0.894 17 N -0.318 5.318 18 C -0.037 4.037 19 C -0.401 4.401 20 H 0.100 0.900 21 C -0.167 4.167 22 N -0.538 5.538 23 Si 0.717 3.283 24 H -0.216 1.216 25 H -0.232 1.232 26 H -0.195 1.195 27 C -0.035 4.035 28 H 0.102 0.898 29 H 0.095 0.905 30 H 0.099 0.901 31 H 0.097 0.903 32 H 0.114 0.886 33 H 0.106 0.894 34 H 0.116 0.884 35 H 0.122 0.878 36 H 0.085 0.915 37 H 0.080 0.920 38 H 0.092 0.908 39 H 0.098 0.902 40 H 0.038 0.962 41 H 0.061 0.939 42 H 0.054 0.946 43 H 0.074 0.926 44 H 0.093 0.907 45 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges 11.674 17.753 -17.971 27.829 hybrid contribution 0.886 -1.954 -0.432 2.189 sum 12.560 15.800 -18.404 27.315 Atomic orbital electron populations 1.20251 0.85933 1.03425 1.03790 1.22087 0.97123 0.89425 0.97949 1.77467 0.84962 1.21567 1.25926 1.48383 1.06342 1.02640 1.57825 1.21935 0.83630 0.95020 1.03679 1.21348 0.90066 0.83923 1.06289 1.98406 1.38130 1.64194 1.96940 1.18922 0.89635 0.95708 1.15944 1.19930 1.03644 0.91517 0.95000 1.20143 0.77038 0.80194 0.91129 1.90704 1.50048 1.53819 1.46633 1.48491 1.66382 1.11227 1.09000 1.22044 0.99594 0.89133 0.91317 1.23258 1.02035 0.95797 0.98699 1.21564 0.97134 0.88418 0.86569 0.89393 1.43959 1.07097 1.43475 1.37224 1.21357 0.87715 0.96808 0.97819 1.18807 1.03247 0.93563 1.24460 0.89977 1.25391 0.97160 0.97420 0.96735 1.69875 1.42443 1.20132 1.21391 0.86827 0.77460 0.82153 0.81824 1.21574 1.23176 1.19472 1.22861 1.00438 0.96727 0.83443 0.89771 0.90533 0.90142 0.90326 0.88639 0.89365 0.88392 0.87757 0.91548 0.92011 0.90769 0.90183 0.96212 0.93919 0.94628 0.92608 0.90704 0.91761 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 33. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.70 10.26 36.01 0.37 -0.33 16 2 C 0.10 1.24 7.22 -82.41 -0.59 0.64 16 3 N -0.28 -3.61 12.57 33.67 0.42 -3.19 16 4 N -0.37 -4.26 4.01 -64.90 -0.26 -4.52 16 5 C 0.10 0.69 11.31 59.85 0.68 1.37 16 6 C 0.14 1.66 7.45 -17.15 -0.13 1.53 16 7 Cl 0.00 -0.05 28.34 -51.86 -1.47 -1.52 16 8 C -0.19 -2.36 4.60 -105.00 -0.48 -2.84 16 9 C -0.06 -0.66 5.02 -29.03 -0.15 -0.81 16 10 C 0.53 7.88 7.84 -10.98 -0.09 7.80 16 11 O -0.54 -10.21 16.29 5.56 0.09 -10.12 16 12 N -0.62 -9.04 3.33 -170.53 -0.57 -9.60 16 13 C 0.10 1.21 6.49 -3.06 -0.02 1.19 16 14 C -0.16 -2.34 6.50 -24.90 -0.16 -2.50 16 15 C 0.17 3.18 3.54 -65.79 -0.23 2.95 16 16 H 0.09 1.67 7.96 -51.93 -0.41 1.25 16 17 N -0.60 -13.55 2.58 -171.04 -0.44 -13.99 16 18 C 0.11 2.27 8.39 59.85 0.50 2.77 16 19 C -0.27 -7.39 9.90 -15.06 -0.15 -7.54 16 20 H 0.08 2.40 8.06 -52.49 -0.42 1.97 16 21 C 0.03 0.95 5.32 -17.43 -0.09 0.85 16 22 N -0.90 -26.96 13.97 55.49 0.78 -26.19 16 23 Si 0.89 21.66 24.93 -169.99 -4.24 17.42 16 24 H -0.29 -6.88 6.67 56.52 0.38 -6.51 16 25 H -0.30 -7.57 7.11 56.52 0.40 -7.17 16 26 H -0.27 -6.31 7.11 56.52 0.40 -5.90 16 27 C 0.09 1.56 6.49 -2.54 -0.02 1.55 16 28 H 0.08 0.83 8.14 -51.93 -0.42 0.41 16 29 H 0.08 0.60 8.14 -51.93 -0.42 0.17 16 30 H 0.08 0.59 7.25 -51.93 -0.38 0.21 16 31 H 0.08 0.40 8.14 -51.93 -0.42 -0.02 16 32 H 0.09 0.58 8.14 -51.93 -0.42 0.16 16 33 H 0.09 0.52 7.80 -51.93 -0.41 0.11 16 34 H 0.10 0.92 7.91 -51.93 -0.41 0.51 16 35 H 0.10 0.88 7.25 -51.93 -0.38 0.50 16 36 H 0.07 0.64 8.14 -51.93 -0.42 0.22 16 37 H 0.06 0.61 8.14 -51.93 -0.42 0.19 16 38 H 0.07 1.14 6.13 -51.93 -0.32 0.83 16 39 H 0.08 1.14 8.14 -51.93 -0.42 0.72 16 40 H 0.02 0.41 8.13 -51.93 -0.42 -0.01 16 41 H 0.04 0.98 2.78 -51.93 -0.14 0.84 16 42 H 0.04 0.64 6.13 -51.92 -0.32 0.33 16 43 H 0.26 7.51 8.31 -40.82 -0.34 7.17 16 44 H 0.07 1.43 8.04 -51.93 -0.42 1.01 16 45 H 0.06 1.17 7.18 -51.93 -0.37 0.80 16 LS Contribution 377.14 15.07 5.68 5.68 Total: -1.00 -34.52 377.14 -7.08 -41.61 By element: Atomic # 1 Polarization: 4.30 SS G_CDS: -6.52 Total: -2.21 kcal Atomic # 6 Polarization: 7.19 SS G_CDS: -0.56 Total: 6.63 kcal Atomic # 7 Polarization: -57.42 SS G_CDS: -0.07 Total: -57.49 kcal Atomic # 8 Polarization: -10.21 SS G_CDS: 0.09 Total: -10.12 kcal Atomic # 14 Polarization: 21.66 SS G_CDS: -4.24 Total: 17.42 kcal Atomic # 17 Polarization: -0.05 SS G_CDS: -1.47 Total: -1.52 kcal Total LS contribution 5.68 Total: 5.68 kcal Total: -34.52 -7.08 -41.61 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000971869310.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 116.090 kcal (2) G-P(sol) polarization free energy of solvation -34.522 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 81.569 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.084 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.606 kcal (6) G-S(sol) free energy of system = (1) + (5) 74.485 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds