Wall clock time and date at job start Sat Apr 11 2020 05:59:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.35468 * 126.42956 * 2 1 4 4 Cl 1.73599 * 127.23872 * 359.94490 * 3 2 1 5 5 C 1.41551 * 105.51887 * 180.21080 * 3 2 1 6 6 C 1.47663 * 126.45810 * 179.76326 * 5 3 2 7 7 O 1.21571 * 120.00309 * 359.97438 * 6 5 3 8 8 N 1.34774 * 119.99780 * 179.97438 * 6 5 3 9 9 C 1.46499 * 120.00115 * 180.02562 * 8 6 5 10 10 C 1.53000 * 109.47226 * 179.97438 * 9 8 6 11 11 H 1.08999 * 110.88709 * 51.12015 * 10 9 8 12 12 C 1.54908 * 111.00590 * 287.19527 * 10 9 8 13 13 N 1.47425 * 104.83061 * 204.91578 * 12 10 9 14 14 C 1.36940 * 125.64680 * 204.14863 * 13 12 10 15 15 H 1.08001 * 119.99907 * 0.02562 * 14 13 12 16 16 C 1.38814 * 119.99835 * 180.02562 * 14 13 12 17 17 N 1.31617 * 119.99941 * 359.97438 * 16 14 13 18 18 Si 1.86805 * 119.99742 * 180.02562 * 16 14 13 19 19 H 1.48499 * 109.47095 * 359.97438 * 18 16 14 20 20 H 1.48504 * 109.46955 * 119.99902 * 18 16 14 21 21 H 1.48500 * 109.46755 * 239.99749 * 18 16 14 22 22 C 1.47020 * 108.70431 * 24.12964 * 13 12 10 23 23 C 1.54323 * 107.27037 * 358.93984 * 22 13 12 24 24 H 1.09006 * 110.87317 * 96.24422 * 23 22 13 25 25 C 1.53005 * 110.71812 * 219.44361 * 23 22 13 26 26 N 1.31828 * 107.07605 * 359.60148 * 5 3 2 27 27 N 1.28467 * 110.13655 * 0.41428 * 26 5 3 28 28 C 1.46502 * 124.93111 * 179.71030 * 27 26 5 29 29 H 1.08993 * 109.47691 * 90.02613 * 1 2 3 30 30 H 1.09001 * 109.46510 * 210.02068 * 1 2 3 31 31 H 1.08997 * 109.47282 * 330.01641 * 1 2 3 32 32 H 0.97007 * 120.00282 * 0.02562 * 8 6 5 33 33 H 1.09000 * 109.46837 * 299.99839 * 9 8 6 34 34 H 1.09003 * 109.46919 * 60.00084 * 9 8 6 35 35 H 1.08993 * 110.36701 * 323.75529 * 12 10 9 36 36 H 1.09000 * 110.36581 * 86.07604 * 12 10 9 37 37 H 0.97007 * 119.99825 * 180.02562 * 17 16 14 38 38 H 1.08996 * 109.88104 * 239.51996 * 22 13 12 39 39 H 1.09003 * 110.01027 * 118.42607 * 22 13 12 40 40 H 1.08997 * 109.47166 * 173.52481 * 25 23 22 41 41 H 1.08999 * 109.47199 * 293.52059 * 25 23 22 42 42 H 1.08993 * 109.46965 * 53.52365 * 25 23 22 43 43 H 1.09000 * 109.47051 * 270.02144 * 28 27 26 44 44 H 1.08998 * 109.47295 * 30.02590 * 28 27 26 45 45 H 1.09003 * 109.46993 * 150.02040 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3115 1.0900 0.0000 4 17 1.8233 2.7559 -0.0013 5 6 3.6338 0.5848 -0.0050 6 6 4.8773 1.3810 -0.0119 7 8 4.8215 2.5954 -0.0141 8 7 6.0742 0.7614 -0.0156 9 6 7.3079 1.5513 -0.0218 10 6 8.5152 0.6114 -0.0245 11 1 8.4263 -0.1333 -0.8154 12 6 8.6960 -0.0642 1.3577 13 7 10.1276 -0.4099 1.4245 14 6 10.6748 -1.3976 2.1991 15 1 10.0409 -2.0014 2.8316 16 6 12.0443 -1.6229 2.1714 17 7 12.8167 -0.8874 1.4002 18 14 12.7907 -2.9708 3.2276 19 1 11.7166 -3.6485 3.9972 20 1 13.4758 -3.9597 2.3569 21 1 13.7730 -2.3754 4.1687 22 6 10.8704 0.4813 0.5214 23 6 9.8400 1.4082 -0.1573 24 1 9.7708 2.3616 0.3666 25 6 10.1952 1.6263 -1.6295 26 7 3.5456 -0.7306 0.0011 27 7 2.3126 -1.0912 0.0007 28 6 1.8447 -2.4795 0.0004 29 1 -0.3634 -0.0005 -1.0276 30 1 -0.3632 -0.8898 0.5142 31 1 -0.3634 0.8901 0.5136 32 1 6.1187 -0.2077 -0.0142 33 1 7.3333 2.1784 -0.9130 34 1 7.3404 2.1814 0.8670 35 1 8.4358 0.6303 2.1564 36 1 8.0849 -0.9645 1.4227 37 1 13.7737 -1.0450 1.3806 38 1 11.3930 -0.1071 -0.2327 39 1 11.5861 1.0756 1.0893 40 1 9.3971 2.1865 -2.1166 41 1 11.1273 2.1870 -1.6991 42 1 10.3141 0.6610 -2.1214 43 1 1.7294 -2.8238 -1.0273 44 1 2.5716 -3.1080 0.5149 45 1 0.8849 -2.5394 0.5136 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001093012738.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 05:59:34 Heat of formation + Delta-G solvation = 55.464648 kcal Electronic energy + Delta-G solvation = -27092.954201 eV Core-core repulsion = 23173.732797 eV Total energy + Delta-G solvation = -3919.221404 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 340.141 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -43.03936 -39.39978 -37.88820 -36.66167 -34.59210 -33.93994 -32.91745 -32.79817 -30.68542 -29.49870 -27.88120 -27.33274 -25.91621 -25.07608 -23.47908 -22.31272 -21.33042 -20.11665 -19.92651 -19.02481 -17.64234 -16.91154 -16.89499 -16.56072 -15.76609 -15.18520 -15.08980 -14.75259 -14.24900 -14.04603 -13.79193 -13.72606 -13.54678 -13.39242 -13.18752 -12.92615 -12.82167 -12.71842 -12.46119 -12.02113 -11.76236 -11.68323 -11.61005 -11.34082 -11.16168 -10.82148 -10.78856 -10.74376 -10.18079 -10.01406 -9.93634 -9.85552 -9.66493 -9.50927 -9.48522 -8.98633 -8.82223 -8.57240 -6.78753 -5.67981 -3.01026 1.28218 1.57450 1.65278 2.41885 3.22636 3.35878 3.41211 3.46548 3.49130 4.02241 4.11841 4.45544 4.51853 4.56160 4.62736 4.87825 5.00750 5.02392 5.18115 5.26865 5.28908 5.33807 5.39556 5.57403 5.61692 5.72187 5.82832 5.93681 6.08575 6.16853 6.24687 6.26689 6.35230 6.51965 6.54404 6.64525 6.68455 6.82082 7.01128 7.37926 7.61006 7.68897 7.69855 7.87953 8.28414 8.29796 9.25826 9.86176 10.52796 11.43731 Molecular weight = 340.14amu Principal moments of inertia in cm(-1) A = 0.015400 B = 0.002503 C = 0.002246 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1817.703922 B =11183.295213 C =12463.678048 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 C 0.023 3.977 3 C -0.104 4.104 4 Cl -0.009 7.009 5 C 0.004 3.996 6 C 0.597 3.403 7 O -0.521 6.521 8 N -0.710 5.710 9 C 0.133 3.867 10 C -0.112 4.112 11 H 0.080 0.920 12 C 0.142 3.858 13 N -0.607 5.607 14 C -0.226 4.226 15 H 0.077 0.923 16 C -0.010 4.010 17 N -0.921 5.921 18 Si 0.911 3.089 19 H -0.280 1.280 20 H -0.291 1.291 21 H -0.291 1.291 22 C 0.184 3.816 23 C -0.110 4.110 24 H 0.068 0.932 25 C -0.134 4.134 26 N -0.245 5.245 27 N -0.278 5.278 28 C 0.086 3.914 29 H 0.083 0.917 30 H 0.075 0.925 31 H 0.089 0.911 32 H 0.407 0.593 33 H 0.068 0.932 34 H 0.071 0.929 35 H 0.020 0.980 36 H 0.036 0.964 37 H 0.251 0.749 38 H 0.048 0.952 39 H 0.041 0.959 40 H 0.045 0.955 41 H 0.053 0.947 42 H 0.053 0.947 43 H 0.089 0.911 44 H 0.103 0.897 45 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -26.410 0.129 -6.180 27.124 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C -0.102 4.102 3 C -0.141 4.141 4 Cl 0.020 6.980 5 C -0.157 4.157 6 C 0.380 3.620 7 O -0.395 6.395 8 N -0.361 5.361 9 C 0.010 3.990 10 C -0.132 4.132 11 H 0.099 0.901 12 C 0.015 3.985 13 N -0.333 5.333 14 C -0.354 4.354 15 H 0.095 0.905 16 C -0.206 4.206 17 N -0.569 5.569 18 Si 0.742 3.258 19 H -0.206 1.206 20 H -0.218 1.218 21 H -0.218 1.218 22 C 0.059 3.941 23 C -0.130 4.130 24 H 0.086 0.914 25 C -0.192 4.192 26 N -0.080 5.080 27 N -0.067 5.067 28 C -0.054 4.054 29 H 0.102 0.898 30 H 0.094 0.906 31 H 0.108 0.892 32 H 0.242 0.758 33 H 0.086 0.914 34 H 0.089 0.911 35 H 0.037 0.963 36 H 0.054 0.946 37 H 0.061 0.939 38 H 0.067 0.933 39 H 0.059 0.941 40 H 0.064 0.936 41 H 0.072 0.928 42 H 0.073 0.927 43 H 0.107 0.893 44 H 0.121 0.879 45 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -25.632 -0.041 -6.119 26.352 hybrid contribution 0.016 -0.505 0.580 0.769 sum -25.616 -0.546 -5.540 26.214 Atomic orbital electron populations 1.20403 0.85804 1.04318 1.03761 1.21107 0.95436 0.85782 1.07914 1.20508 0.92038 0.87719 1.13874 1.98355 1.90790 1.11780 1.97110 1.21915 0.94383 0.89428 1.09976 1.16752 0.81536 0.86441 0.77265 1.90830 1.86531 1.12395 1.49786 1.45913 1.05207 1.11120 1.73838 1.21457 0.81544 0.93768 1.02243 1.22672 0.93180 0.97492 0.99877 0.90131 1.21587 0.87675 0.96357 0.92852 1.44475 1.00503 1.38486 1.49804 1.19102 0.90866 1.08084 1.17356 0.90487 1.24800 0.96114 0.99653 1.00020 1.69978 1.03914 1.41272 1.41764 0.86057 0.79060 0.81190 0.79532 1.20563 1.21814 1.21796 1.21213 0.90529 0.90056 0.92296 1.22441 0.95237 0.99012 0.96313 0.91359 1.21695 1.00501 1.01303 0.95677 1.73669 1.01803 1.13756 1.18770 1.45287 1.02612 1.07457 1.51325 1.22260 1.01920 0.76358 1.04866 0.89800 0.90626 0.89221 0.75795 0.91355 0.91107 0.96278 0.94587 0.93858 0.93339 0.94056 0.93623 0.92791 0.92746 0.89263 0.87881 0.88421 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.41 9.99 36.01 0.36 -0.05 16 2 C 0.02 0.21 6.94 -81.90 -0.57 -0.36 16 3 C -0.10 -1.29 6.79 -39.31 -0.27 -1.56 16 4 Cl -0.01 -0.11 27.92 -51.86 -1.45 -1.56 16 5 C 0.00 0.06 7.13 -82.76 -0.59 -0.53 16 6 C 0.60 9.44 7.82 -12.41 -0.10 9.34 16 7 O -0.52 -9.48 15.87 5.30 0.08 -9.40 16 8 N -0.71 -10.44 5.50 -61.31 -0.34 -10.78 16 9 C 0.13 2.05 5.13 -4.04 -0.02 2.03 16 10 C -0.11 -1.94 2.50 -88.47 -0.22 -2.16 16 11 H 0.08 1.38 8.05 -51.93 -0.42 0.96 16 12 C 0.14 2.94 6.65 -2.53 -0.02 2.92 16 13 N -0.61 -15.61 3.39 -170.08 -0.58 -16.19 16 14 C -0.23 -6.35 10.28 -15.06 -0.15 -6.51 16 15 H 0.08 2.10 7.83 -52.49 -0.41 1.69 16 16 C -0.01 -0.28 5.49 -17.43 -0.10 -0.38 16 17 N -0.92 -27.28 10.31 55.49 0.57 -26.71 16 18 Si 0.91 22.29 29.55 -169.99 -5.02 17.26 16 19 H -0.28 -6.64 7.11 56.52 0.40 -6.24 16 20 H -0.29 -7.14 7.11 56.52 0.40 -6.74 16 21 H -0.29 -7.18 7.11 56.52 0.40 -6.78 16 22 C 0.18 4.47 4.97 -3.07 -0.02 4.45 16 23 C -0.11 -2.04 3.02 -88.78 -0.27 -2.31 16 24 H 0.07 1.23 8.04 -51.93 -0.42 0.81 16 25 C -0.13 -2.14 9.16 37.16 0.34 -1.80 16 26 N -0.24 -3.01 11.66 33.42 0.39 -2.62 16 27 N -0.28 -2.53 3.72 -63.68 -0.24 -2.76 16 28 C 0.09 0.34 11.12 59.85 0.67 1.01 16 29 H 0.08 0.31 8.14 -51.93 -0.42 -0.12 16 30 H 0.07 0.19 7.02 -51.93 -0.36 -0.18 16 31 H 0.09 0.43 8.03 -51.93 -0.42 0.02 16 32 H 0.41 5.59 8.19 -40.82 -0.33 5.26 16 33 H 0.07 1.02 8.10 -51.93 -0.42 0.60 16 34 H 0.07 1.15 7.96 -51.93 -0.41 0.74 16 35 H 0.02 0.41 7.90 -51.93 -0.41 0.00 16 36 H 0.04 0.72 8.14 -51.93 -0.42 0.30 16 37 H 0.25 7.21 8.31 -40.82 -0.34 6.87 16 38 H 0.05 1.30 7.01 -51.93 -0.36 0.93 16 39 H 0.04 1.12 7.50 -51.93 -0.39 0.73 16 40 H 0.04 0.63 8.10 -51.93 -0.42 0.21 16 41 H 0.05 0.83 8.14 -51.93 -0.42 0.41 16 42 H 0.05 0.89 8.06 -51.93 -0.42 0.47 16 43 H 0.09 0.23 8.14 -51.93 -0.42 -0.20 16 44 H 0.10 0.39 8.14 -51.93 -0.42 -0.03 16 45 H 0.10 0.12 6.98 -51.93 -0.36 -0.24 16 LS Contribution 384.03 15.07 5.79 5.79 Total: -1.00 -34.83 384.03 -8.55 -43.38 By element: Atomic # 1 Polarization: 6.30 SS G_CDS: -6.81 Total: -0.52 kcal Atomic # 6 Polarization: 5.05 SS G_CDS: -0.95 Total: 4.10 kcal Atomic # 7 Polarization: -58.87 SS G_CDS: -0.19 Total: -59.06 kcal Atomic # 8 Polarization: -9.48 SS G_CDS: 0.08 Total: -9.40 kcal Atomic # 14 Polarization: 22.29 SS G_CDS: -5.02 Total: 17.26 kcal Atomic # 17 Polarization: -0.11 SS G_CDS: -1.45 Total: -1.56 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -34.83 -8.55 -43.38 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001093012738.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 98.848 kcal (2) G-P(sol) polarization free energy of solvation -34.835 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 64.013 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.548 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.383 kcal (6) G-S(sol) free energy of system = (1) + (5) 55.465 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds