Wall clock time and date at job start Sat Apr 11 2020 06:00:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.53003 * 109.47050 * 2 1 4 4 N 1.46500 * 109.47233 * 180.02562 * 3 2 1 5 5 C 1.34770 * 120.00106 * 85.80855 * 4 3 2 6 6 O 1.21610 * 120.00109 * 187.40190 * 5 4 3 7 7 C 1.47381 * 120.00105 * 7.66845 * 5 4 3 8 8 C 1.38064 * 126.42331 * 340.69725 * 7 5 4 9 9 N 1.34235 * 107.43994 * 179.83101 * 8 7 5 10 10 C 1.46502 * 125.74225 * 180.19491 * 9 8 7 11 11 N 1.39926 * 108.51995 * 0.42529 * 9 8 7 12 12 C 1.30530 * 108.89583 * 359.73009 * 11 9 8 13 13 Cl 1.73604 * 126.00472 * 180.02562 * 12 11 9 14 14 C 1.46500 * 119.99772 * 265.80484 * 4 3 2 15 15 H 1.09004 * 110.64268 * 13.32756 * 14 4 3 16 16 C 1.55154 * 110.72259 * 249.98517 * 14 4 3 17 17 C 1.54904 * 101.58547 * 277.14112 * 16 14 4 18 18 N 1.47425 * 104.83202 * 322.98831 * 17 16 14 19 19 C 1.36931 * 125.64857 * 204.09067 * 18 17 16 20 20 H 1.08001 * 119.99946 * 180.02562 * 19 18 17 21 21 C 1.38810 * 120.00370 * 0.04327 * 19 18 17 22 22 N 1.31623 * 119.99608 * 359.97438 * 21 19 18 23 23 Si 1.86795 * 120.00564 * 180.02562 * 21 19 18 24 24 H 1.48505 * 109.46978 * 359.97438 * 23 21 19 25 25 H 1.48497 * 109.47381 * 119.99729 * 23 21 19 26 26 H 1.48498 * 109.47214 * 239.99999 * 23 21 19 27 27 C 1.47027 * 108.70260 * 24.12895 * 18 17 16 28 28 H 1.08994 * 109.47298 * 59.99722 * 1 2 3 29 29 H 1.09003 * 109.46745 * 180.02562 * 1 2 3 30 30 H 1.09003 * 109.46926 * 299.99883 * 1 2 3 31 31 H 1.09003 * 109.47660 * 240.00243 * 2 1 3 32 32 H 1.09003 * 109.47448 * 120.00009 * 2 1 3 33 33 H 1.09003 * 109.47160 * 60.00260 * 3 2 1 34 34 H 1.08994 * 109.47297 * 300.00279 * 3 2 1 35 35 H 1.08006 * 126.28134 * 359.97438 * 8 7 5 36 36 H 1.09005 * 109.46829 * 270.30006 * 10 9 8 37 37 H 1.09004 * 109.47206 * 30.29196 * 10 9 8 38 38 H 1.08998 * 109.47454 * 150.29776 * 10 9 8 39 39 H 1.09006 * 111.00311 * 35.21966 * 16 14 4 40 40 H 1.09005 * 111.00455 * 159.06023 * 16 14 4 41 41 H 1.08998 * 110.36806 * 204.15215 * 17 16 14 42 42 H 1.08997 * 110.45837 * 81.87196 * 17 16 14 43 43 H 0.96998 * 119.99932 * 180.02562 * 22 21 19 44 44 H 1.09000 * 109.87731 * 239.52483 * 27 18 17 45 45 H 1.09001 * 109.88210 * 118.35485 * 27 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 3.5050 1.4426 -0.0006 5 6 4.1783 1.3575 -1.1649 6 8 5.3868 1.2219 -1.1599 7 6 3.4508 1.4346 -2.4443 8 6 2.1000 1.2209 -2.6334 9 7 1.8446 1.3919 -3.9401 10 6 0.5327 1.2643 -4.5795 11 7 3.0432 1.7073 -4.5896 12 6 4.0064 1.7356 -3.7091 13 17 5.6761 2.0825 -4.0340 14 6 4.2379 1.5352 1.2644 15 1 3.5708 1.3612 2.1087 16 6 4.9426 2.9117 1.3911 17 6 6.2403 2.6727 0.5799 18 7 6.6203 1.2797 0.8775 19 6 7.8841 0.7605 0.7872 20 1 8.0599 -0.2776 1.0277 21 6 8.9395 1.5684 0.3868 22 7 8.7252 2.8335 0.0935 23 14 10.6635 0.8601 0.2629 24 1 10.6374 -0.5752 0.6434 25 1 11.1546 0.9940 -1.1320 26 1 11.5690 1.5983 1.1796 27 6 5.4172 0.5400 1.2863 28 1 -0.3633 0.5138 -0.8899 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5138 0.8900 31 1 1.8934 -0.5138 -0.8900 32 1 1.8934 -0.5138 0.8900 33 1 1.6766 1.9564 0.8900 34 1 1.6766 1.9564 -0.8899 35 1 1.3803 0.9655 -1.8697 36 1 0.3829 0.2329 -4.8988 37 1 -0.2462 1.5415 -3.8692 38 1 0.4853 1.9235 -5.4463 39 1 4.3407 3.7016 0.9417 40 1 5.1693 3.1402 2.4326 41 1 7.0232 3.3573 0.9061 42 1 6.0509 2.7946 -0.4866 43 1 9.4625 3.3981 -0.1866 44 1 5.5498 0.1443 2.2933 45 1 5.2276 -0.2748 0.5876 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001691867372.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:00:00 Heat of formation + Delta-G solvation = 126.446681 kcal Electronic energy + Delta-G solvation = -29419.591428 eV Core-core repulsion = 25503.448035 eV Total energy + Delta-G solvation = -3916.143392 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 340.141 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -41.58375 -39.57732 -36.50599 -36.13055 -35.99968 -33.26580 -32.97765 -31.60777 -30.37985 -28.80500 -27.32951 -27.04210 -25.90773 -24.29182 -22.72315 -21.71905 -21.63647 -20.42064 -19.78856 -18.61617 -17.11891 -16.71886 -16.44242 -15.89732 -15.39736 -15.11885 -14.86316 -14.71070 -14.33756 -13.85327 -13.57771 -13.41626 -13.28733 -13.17754 -13.01382 -12.79348 -12.21046 -11.99135 -11.87269 -11.67479 -11.55149 -11.47119 -11.32303 -11.25231 -10.93408 -10.73184 -10.66487 -10.59140 -10.44358 -9.86656 -9.84331 -9.55307 -9.32233 -9.26817 -8.84398 -8.57699 -8.34782 -7.76515 -6.36628 -5.29828 -2.65493 1.45464 1.59778 2.15139 2.75822 3.42209 3.58352 3.63456 3.65751 3.85290 4.29032 4.47013 4.68089 4.75868 4.78380 4.79066 4.91159 5.03111 5.10493 5.19269 5.27302 5.31795 5.40777 5.48225 5.60134 5.73017 5.74332 5.79964 5.85494 5.91591 5.97838 6.12362 6.17218 6.44908 6.61023 6.65006 6.74832 6.88283 6.95964 7.29781 7.36917 7.90056 7.97545 8.08796 8.22863 8.72195 9.04811 9.58380 10.20495 10.87867 11.73922 Molecular weight = 340.14amu Principal moments of inertia in cm(-1) A = 0.012637 B = 0.004783 C = 0.003755 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2215.133584 B = 5852.612937 C = 7454.503187 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C -0.158 4.158 3 C 0.093 3.907 4 N -0.607 5.607 5 C 0.550 3.450 6 O -0.428 6.428 7 C -0.254 4.254 8 C 0.067 3.933 9 N -0.358 5.358 10 C 0.099 3.901 11 N -0.292 5.292 12 C 0.167 3.833 13 Cl 0.043 6.957 14 C 0.139 3.861 15 H 0.081 0.919 16 C -0.161 4.161 17 C 0.157 3.843 18 N -0.576 5.576 19 C -0.196 4.196 20 H 0.069 0.931 21 C -0.014 4.014 22 N -0.919 5.919 23 Si 0.903 3.097 24 H -0.284 1.284 25 H -0.295 1.295 26 H -0.295 1.295 27 C 0.141 3.859 28 H 0.050 0.950 29 H 0.059 0.941 30 H 0.060 0.940 31 H 0.068 0.932 32 H 0.076 0.924 33 H 0.079 0.921 34 H 0.081 0.919 35 H 0.209 0.791 36 H 0.080 0.920 37 H 0.092 0.908 38 H 0.094 0.906 39 H 0.054 0.946 40 H 0.063 0.937 41 H 0.093 0.907 42 H 0.038 0.962 43 H 0.244 0.756 44 H 0.017 0.983 45 H 0.022 0.978 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -23.937 -2.154 -4.205 24.399 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.197 4.197 3 C -0.031 4.031 4 N -0.343 5.343 5 C 0.335 3.665 6 O -0.296 6.296 7 C -0.269 4.269 8 C -0.081 4.081 9 N -0.140 5.140 10 C -0.042 4.042 11 N -0.118 5.118 12 C -0.025 4.025 13 Cl 0.071 6.929 14 C 0.036 3.964 15 H 0.099 0.901 16 C -0.200 4.200 17 C 0.032 3.968 18 N -0.301 5.301 19 C -0.325 4.325 20 H 0.087 0.913 21 C -0.208 4.208 22 N -0.570 5.570 23 Si 0.736 3.264 24 H -0.209 1.209 25 H -0.222 1.222 26 H -0.223 1.223 27 C 0.014 3.986 28 H 0.069 0.931 29 H 0.078 0.922 30 H 0.079 0.921 31 H 0.087 0.913 32 H 0.095 0.905 33 H 0.097 0.903 34 H 0.099 0.901 35 H 0.225 0.775 36 H 0.098 0.902 37 H 0.110 0.890 38 H 0.112 0.888 39 H 0.073 0.927 40 H 0.082 0.918 41 H 0.110 0.890 42 H 0.056 0.944 43 H 0.055 0.945 44 H 0.035 0.965 45 H 0.040 0.960 Dipole moment (debyes) X Y Z Total from point charges -23.276 -2.017 -5.595 24.024 hybrid contribution 0.912 -0.517 0.525 1.172 sum -22.364 -2.534 -5.070 23.071 Atomic orbital electron populations 1.21772 0.95323 1.02142 1.01777 1.22212 0.95656 0.98072 1.03788 1.22026 0.81653 0.96120 1.03261 1.47619 1.04827 1.75776 1.06088 1.17206 0.87374 0.80101 0.81794 1.91243 1.11248 1.41585 1.85493 1.20506 0.92555 1.18450 0.95427 1.24352 0.97361 0.99354 0.87082 1.48191 1.07324 1.52729 1.05730 1.21995 0.78454 1.03932 0.99837 1.77172 0.89736 1.25055 1.19809 1.22821 0.89602 0.99023 0.91103 1.98482 1.06175 1.92566 1.95696 1.22060 0.93143 0.97738 0.83460 0.90104 1.23533 1.00498 0.94784 1.01235 1.22064 0.91388 0.87288 0.96016 1.44129 1.01697 1.06455 1.77815 1.18986 0.82806 0.94273 1.36485 0.91265 1.24618 0.97400 0.96116 1.02701 1.69841 1.28960 1.04860 1.53317 0.86136 0.85464 0.77748 0.77071 1.20906 1.22210 1.22272 1.21356 0.87268 0.93716 0.96246 0.93098 0.92213 0.92097 0.91350 0.90502 0.90263 0.90090 0.77471 0.90182 0.88987 0.88762 0.92699 0.91807 0.88958 0.94418 0.94487 0.96514 0.95999 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 20. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.83 9.77 37.16 0.36 -0.47 16 2 C -0.16 -1.36 5.25 -26.73 -0.14 -1.50 16 3 C 0.09 0.96 4.89 -4.04 -0.02 0.94 16 4 N -0.61 -9.59 2.51 -165.30 -0.42 -10.00 16 5 C 0.55 10.59 6.66 -12.54 -0.08 10.51 16 6 O -0.43 -10.47 9.44 5.27 0.05 -10.42 16 7 C -0.25 -4.21 5.90 -105.04 -0.62 -4.84 16 8 C 0.07 0.78 8.43 -16.56 -0.14 0.64 16 9 N -0.36 -4.09 3.98 -67.59 -0.27 -4.35 16 10 C 0.10 0.55 11.44 59.85 0.68 1.23 16 11 N -0.29 -4.57 12.50 33.18 0.41 -4.15 16 12 C 0.17 2.97 7.87 -16.91 -0.13 2.84 16 13 Cl 0.04 0.84 28.21 -51.86 -1.46 -0.62 16 14 C 0.14 2.45 3.67 -66.09 -0.24 2.21 16 15 H 0.08 1.15 7.96 -51.93 -0.41 0.74 16 16 C -0.16 -3.20 6.69 -24.59 -0.16 -3.36 16 17 C 0.16 4.08 4.91 -2.53 -0.01 4.07 16 18 N -0.58 -15.65 2.23 -170.07 -0.38 -16.03 16 19 C -0.20 -5.87 10.27 -15.06 -0.15 -6.03 16 20 H 0.07 2.04 7.83 -52.49 -0.41 1.63 16 21 C -0.01 -0.42 5.49 -17.43 -0.10 -0.51 16 22 N -0.92 -28.71 10.09 55.49 0.56 -28.15 16 23 Si 0.90 23.86 29.55 -169.99 -5.02 18.84 16 24 H -0.28 -7.28 7.11 56.52 0.40 -6.88 16 25 H -0.29 -7.91 7.11 56.52 0.40 -7.51 16 26 H -0.30 -7.74 7.11 56.52 0.40 -7.34 16 27 C 0.14 3.14 5.99 -3.06 -0.02 3.12 16 28 H 0.05 0.20 7.32 -51.93 -0.38 -0.18 16 29 H 0.06 0.31 8.14 -51.93 -0.42 -0.11 16 30 H 0.06 0.30 8.14 -51.93 -0.42 -0.12 16 31 H 0.07 0.67 6.76 -51.93 -0.35 0.32 16 32 H 0.08 0.73 8.14 -51.93 -0.42 0.31 16 33 H 0.08 0.69 7.99 -51.93 -0.41 0.28 16 34 H 0.08 0.76 4.45 -51.93 -0.23 0.52 16 35 H 0.21 1.71 2.56 -52.48 -0.13 1.57 16 36 H 0.08 0.34 8.14 -51.93 -0.42 -0.08 16 37 H 0.09 0.22 8.14 -51.93 -0.42 -0.20 16 38 H 0.09 0.48 8.14 -51.93 -0.42 0.06 16 39 H 0.05 1.01 8.14 -51.93 -0.42 0.58 16 40 H 0.06 1.22 8.14 -51.93 -0.42 0.80 16 41 H 0.09 2.73 5.87 -51.93 -0.31 2.42 16 42 H 0.04 1.09 5.49 -51.93 -0.29 0.80 16 43 H 0.24 7.44 8.31 -40.82 -0.34 7.11 16 44 H 0.02 0.37 8.14 -51.93 -0.42 -0.05 16 45 H 0.02 0.52 7.18 -51.93 -0.37 0.15 16 LS Contribution 362.08 15.07 5.46 5.46 Total: -1.00 -37.68 362.08 -8.09 -45.77 By element: Atomic # 1 Polarization: 1.05 SS G_CDS: -6.24 Total: -5.19 kcal Atomic # 6 Polarization: 9.64 SS G_CDS: -0.78 Total: 8.86 kcal Atomic # 7 Polarization: -62.60 SS G_CDS: -0.09 Total: -62.69 kcal Atomic # 8 Polarization: -10.47 SS G_CDS: 0.05 Total: -10.42 kcal Atomic # 14 Polarization: 23.86 SS G_CDS: -5.02 Total: 18.84 kcal Atomic # 17 Polarization: 0.84 SS G_CDS: -1.46 Total: -0.62 kcal Total LS contribution 5.46 Total: 5.46 kcal Total: -37.68 -8.09 -45.77 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001691867372.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 172.213 kcal (2) G-P(sol) polarization free energy of solvation -37.681 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 134.532 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.085 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.766 kcal (6) G-S(sol) free energy of system = (1) + (5) 126.447 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds