Wall clock time and date at job start Sat Apr 11 2020 06:00:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 N 1.46504 * 109.47123 * 2 1 4 4 N 1.39926 * 125.75362 * 270.18344 * 3 2 1 5 5 C 1.30417 * 108.96063 * 180.27291 * 4 3 2 6 6 C 1.50695 * 125.97556 * 179.70883 * 5 4 3 7 7 C 1.41343 * 108.04614 * 359.74356 * 5 4 3 8 8 C 1.47296 * 126.43362 * 180.02562 * 7 5 4 9 9 O 1.21615 * 119.99844 * 269.97228 * 8 7 5 10 10 N 1.34779 * 120.00239 * 89.97549 * 8 7 5 11 11 C 1.46502 * 119.99890 * 180.02562 * 10 8 7 12 12 H 1.08995 * 109.47222 * 324.99540 * 11 10 8 13 13 C 1.52995 * 109.47196 * 84.99891 * 11 10 8 14 14 C 1.53004 * 109.46661 * 204.99865 * 11 10 8 15 15 C 1.53939 * 113.73992 * 161.99670 * 14 11 10 16 16 N 1.47809 * 86.03896 * 222.08285 * 15 14 11 17 17 C 1.36942 * 134.46145 * 204.64994 * 16 15 14 18 18 H 1.08001 * 120.00047 * 179.86293 * 17 16 15 19 19 C 1.38811 * 119.99361 * 359.85819 * 17 16 15 20 20 N 1.31612 * 120.00808 * 0.02562 * 19 17 16 21 21 Si 1.86808 * 119.99503 * 180.02562 * 19 17 16 22 22 H 1.48505 * 109.47118 * 0.02562 * 21 19 17 23 23 H 1.48492 * 109.47091 * 120.00246 * 21 19 17 24 24 H 1.48498 * 109.47016 * 240.00326 * 21 19 17 25 25 C 1.47582 * 91.05056 * 24.54763 * 16 15 14 26 26 C 1.34351 * 125.74743 * 90.00026 * 3 2 1 27 27 Cl 1.73604 * 126.31818 * 0.02562 * 26 3 2 28 28 H 1.09002 * 109.47429 * 299.99687 * 1 2 3 29 29 H 1.09004 * 109.47300 * 60.00032 * 1 2 3 30 30 H 1.08996 * 109.47449 * 179.97438 * 1 2 3 31 31 H 1.08997 * 109.46992 * 240.00474 * 2 1 3 32 32 H 1.08995 * 109.47522 * 120.00086 * 2 1 3 33 33 H 1.08999 * 109.47127 * 270.04011 * 6 5 4 34 34 H 1.08997 * 109.47214 * 30.04224 * 6 5 4 35 35 H 1.08996 * 109.47171 * 150.04237 * 6 5 4 36 36 H 0.97002 * 119.99831 * 359.97438 * 10 8 7 37 37 H 1.09002 * 109.47269 * 55.80736 * 13 11 10 38 38 H 1.08997 * 109.46956 * 175.80464 * 13 11 10 39 39 H 1.08999 * 109.47037 * 295.80315 * 13 11 10 40 40 H 1.08999 * 112.94227 * 293.58356 * 14 11 10 41 41 H 1.09002 * 113.77264 * 336.34958 * 15 14 11 42 42 H 1.08999 * 113.77193 * 107.74897 * 15 14 11 43 43 H 0.96994 * 120.00253 * 179.97438 * 20 19 17 44 44 H 1.08995 * 113.77181 * 221.15308 * 25 16 15 45 45 H 1.08996 * 113.86784 * 89.76747 * 25 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3813 0.0000 4 7 2.2874 2.1533 -1.1355 5 6 2.7103 3.3281 -0.7588 6 6 3.1153 4.4575 -1.6706 7 6 2.7230 3.3564 0.6543 8 6 3.1310 4.4891 1.5029 9 8 4.2907 4.6006 1.8519 10 7 2.2192 5.4018 1.8928 11 6 2.6252 6.5287 2.7364 12 1 3.4041 6.2040 3.4262 13 6 3.1628 7.6578 1.8550 14 6 1.4181 7.0321 3.5305 15 6 1.7937 7.8971 4.7472 16 7 0.7423 7.1527 5.4718 17 6 -0.0417 7.4176 6.5629 18 1 -0.7591 6.6854 6.9030 19 6 0.0858 8.6273 7.2317 20 7 0.9597 9.5198 6.8171 21 14 -0.9832 8.9884 8.7205 22 1 -1.8770 7.8313 8.9806 23 1 -0.1191 9.2219 9.9054 24 1 -1.8029 10.1988 8.4594 25 6 0.8748 6.0108 4.5463 26 6 2.2799 2.1213 1.0904 27 17 2.1023 1.6170 2.7421 28 1 -0.3634 0.5138 0.8900 29 1 -0.3634 0.5138 -0.8900 30 1 -0.3634 -1.0276 -0.0005 31 1 1.8933 -0.5137 -0.8900 32 1 1.8933 -0.5138 0.8899 33 1 4.1798 4.3816 -1.8921 34 1 2.5459 4.3976 -2.5981 35 1 2.9131 5.4100 -1.1810 36 1 1.2943 5.3130 1.6142 37 1 2.4098 7.9319 1.1161 38 1 3.3951 8.5235 2.4752 39 1 4.0664 7.3226 1.3459 40 1 0.6482 7.4745 2.8984 41 1 2.8003 7.7135 5.1229 42 1 1.5734 8.9567 4.6177 43 1 1.0485 10.3651 7.2843 44 1 -0.0777 5.5672 4.2566 45 1 1.6103 5.2707 4.8614 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000970897490.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:00:29 Heat of formation + Delta-G solvation = 81.587681 kcal Electronic energy + Delta-G solvation = -27482.682612 eV Core-core repulsion = 23564.593988 eV Total energy + Delta-G solvation = -3918.088625 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 340.141 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -41.74474 -39.46158 -37.88972 -37.24368 -35.26917 -34.68426 -32.16171 -31.70899 -31.04665 -29.62249 -28.01929 -27.43769 -24.96447 -24.38669 -23.78370 -22.43789 -21.10462 -20.62414 -20.03187 -19.11598 -17.78638 -16.79505 -16.66289 -16.10426 -15.66674 -15.35552 -14.87125 -14.77265 -14.35890 -14.01515 -13.89849 -13.69402 -13.46551 -13.36790 -12.97652 -12.94774 -12.70545 -12.60602 -12.28854 -12.08671 -12.00445 -11.90054 -11.74033 -11.55874 -11.37850 -11.19201 -10.99730 -10.86743 -10.63815 -10.29721 -10.09735 -9.78188 -9.62743 -9.55497 -9.38314 -8.88739 -8.79820 -8.75131 -6.84020 -5.74320 -3.05994 1.04951 1.16760 2.07722 2.15610 2.66195 3.39945 3.42071 3.45334 3.47923 3.99518 4.39893 4.45951 4.47420 4.67660 4.71196 4.91967 5.09524 5.13227 5.18084 5.20826 5.28006 5.36562 5.44653 5.50413 5.58048 5.59770 5.61266 5.71297 5.86708 6.04944 6.08306 6.13666 6.27001 6.33707 6.41036 6.50224 6.64485 6.68086 6.86395 7.16946 7.26161 7.40619 7.59282 7.71227 8.01088 8.38868 9.07548 9.73686 10.63483 11.43048 Molecular weight = 340.14amu Principal moments of inertia in cm(-1) A = 0.015427 B = 0.002840 C = 0.002537 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1814.608242 B = 9857.703580 C =11035.483977 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C 0.121 3.879 3 N -0.351 5.351 4 N -0.275 5.275 5 C 0.119 3.881 6 C -0.077 4.077 7 C -0.255 4.255 8 C 0.596 3.404 9 O -0.531 6.531 10 N -0.707 5.707 11 C 0.150 3.850 12 H 0.088 0.912 13 C -0.158 4.158 14 C -0.146 4.146 15 C 0.176 3.824 16 N -0.613 5.613 17 C -0.221 4.221 18 H 0.079 0.921 19 C -0.009 4.009 20 N -0.921 5.921 21 Si 0.910 3.090 22 H -0.280 1.280 23 H -0.291 1.291 24 H -0.290 1.290 25 C 0.126 3.874 26 C 0.158 3.842 27 Cl 0.016 6.984 28 H 0.065 0.935 29 H 0.069 0.931 30 H 0.082 0.918 31 H 0.104 0.896 32 H 0.097 0.903 33 H 0.085 0.915 34 H 0.080 0.920 35 H 0.083 0.917 36 H 0.399 0.601 37 H 0.054 0.946 38 H 0.071 0.929 39 H 0.054 0.946 40 H 0.088 0.912 41 H 0.028 0.972 42 H 0.075 0.925 43 H 0.253 0.747 44 H 0.039 0.961 45 H 0.032 0.968 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.421 -16.914 -18.666 25.230 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C 0.000 4.000 3 N -0.133 5.133 4 N -0.098 5.098 5 C -0.047 4.047 6 C -0.136 4.136 7 C -0.271 4.271 8 C 0.379 3.621 9 O -0.407 6.407 10 N -0.357 5.357 11 C 0.046 3.954 12 H 0.106 0.894 13 C -0.217 4.217 14 C -0.166 4.166 15 C 0.050 3.950 16 N -0.339 5.339 17 C -0.349 4.349 18 H 0.097 0.903 19 C -0.205 4.205 20 N -0.568 5.568 21 Si 0.741 3.259 22 H -0.205 1.205 23 H -0.218 1.218 24 H -0.217 1.217 25 C 0.000 4.000 26 C 0.002 3.998 27 Cl 0.044 6.956 28 H 0.084 0.916 29 H 0.088 0.912 30 H 0.100 0.900 31 H 0.122 0.878 32 H 0.115 0.885 33 H 0.104 0.896 34 H 0.099 0.901 35 H 0.102 0.898 36 H 0.233 0.767 37 H 0.073 0.927 38 H 0.090 0.910 39 H 0.073 0.927 40 H 0.107 0.893 41 H 0.046 0.954 42 H 0.093 0.907 43 H 0.063 0.937 44 H 0.057 0.943 45 H 0.050 0.950 Dipole moment (debyes) X Y Z Total from point charges 1.789 -17.583 -18.948 25.911 hybrid contribution -0.840 0.342 1.749 1.970 sum 0.949 -17.240 -17.199 24.371 Atomic orbital electron populations 1.22197 0.93416 1.03620 1.03701 1.21899 0.95963 0.76901 1.05192 1.48582 1.50306 1.12488 1.01952 1.77239 1.23249 1.03974 1.05318 1.22288 0.96496 0.94285 0.91653 1.20298 1.02514 0.93240 0.97509 1.19885 1.17887 0.95227 0.94140 1.17077 0.85332 0.80800 0.78896 1.90795 1.18378 1.75892 1.55626 1.46135 1.11783 1.25884 1.51898 1.21153 0.97867 0.84964 0.91464 0.89380 1.22115 1.00747 0.98697 1.00094 1.23844 0.96317 1.00186 0.96299 1.22227 0.91202 0.97128 0.84431 1.45995 1.41199 1.13974 1.32700 1.19065 1.12598 1.00159 1.03093 0.90325 1.24770 0.99397 0.96775 0.99560 1.69811 1.37305 1.07919 1.41781 0.86071 0.79503 0.77838 0.82496 1.20531 1.21771 1.21719 1.22521 0.97100 0.91510 0.88874 1.22003 1.01914 0.91978 0.83936 1.98462 1.95909 1.90888 1.10308 0.91593 0.91241 0.89971 0.87783 0.88469 0.89637 0.90084 0.89848 0.76713 0.92729 0.91028 0.92700 0.89331 0.95394 0.90716 0.93703 0.94263 0.95011 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.96 10.24 37.16 0.38 -0.58 16 2 C 0.12 0.80 6.97 -4.04 -0.03 0.77 16 3 N -0.35 -3.67 3.58 -57.57 -0.21 -3.87 16 4 N -0.27 -3.19 12.49 33.90 0.42 -2.77 16 5 C 0.12 1.38 7.26 -82.02 -0.60 0.79 16 6 C -0.08 -0.67 10.28 36.00 0.37 -0.30 16 7 C -0.26 -3.34 5.88 -105.02 -0.62 -3.96 16 8 C 0.60 8.85 7.16 -12.58 -0.09 8.76 16 9 O -0.53 -9.80 16.77 5.26 0.09 -9.72 16 10 N -0.71 -9.58 4.94 -54.92 -0.27 -9.85 16 11 C 0.15 2.32 2.29 -67.93 -0.16 2.16 16 12 H 0.09 1.58 7.48 -51.93 -0.39 1.19 16 13 C -0.16 -2.18 9.46 37.16 0.35 -1.82 16 14 C -0.15 -2.62 3.35 -89.70 -0.30 -2.92 16 15 C 0.18 4.07 6.90 -2.84 -0.02 4.05 16 16 N -0.61 -15.76 3.70 -177.72 -0.66 -16.42 16 17 C -0.22 -6.27 10.70 -15.06 -0.16 -6.43 16 18 H 0.08 2.16 7.83 -52.49 -0.41 1.75 16 19 C -0.01 -0.25 5.50 -17.43 -0.10 -0.34 16 20 N -0.92 -27.35 11.39 55.49 0.63 -26.72 16 21 Si 0.91 22.27 29.55 -169.99 -5.02 17.25 16 22 H -0.28 -6.63 7.11 56.52 0.40 -6.23 16 23 H -0.29 -7.17 7.11 56.52 0.40 -6.77 16 24 H -0.29 -7.10 7.11 56.52 0.40 -6.70 16 25 C 0.13 2.56 8.38 -2.97 -0.02 2.54 16 26 C 0.16 1.90 7.54 -16.44 -0.12 1.77 16 27 Cl 0.02 0.18 28.56 -51.86 -1.48 -1.30 16 28 H 0.06 0.44 8.14 -51.93 -0.42 0.01 16 29 H 0.07 0.45 8.14 -51.93 -0.42 0.03 16 30 H 0.08 0.28 8.14 -51.93 -0.42 -0.14 16 31 H 0.10 0.55 8.14 -51.93 -0.42 0.13 16 32 H 0.10 0.52 7.77 -51.93 -0.40 0.12 16 33 H 0.09 0.69 8.14 -51.93 -0.42 0.27 16 34 H 0.08 0.57 8.14 -51.93 -0.42 0.14 16 35 H 0.08 0.70 8.00 -51.93 -0.42 0.28 16 36 H 0.40 4.68 8.59 -40.82 -0.35 4.33 16 37 H 0.05 0.66 8.14 -51.93 -0.42 0.24 16 38 H 0.07 1.01 7.99 -51.93 -0.42 0.60 16 39 H 0.05 0.76 8.14 -51.93 -0.42 0.33 16 40 H 0.09 1.52 8.14 -51.93 -0.42 1.10 16 41 H 0.03 0.67 8.04 -51.93 -0.42 0.26 16 42 H 0.07 1.90 7.16 -51.93 -0.37 1.53 16 43 H 0.25 7.26 8.31 -40.82 -0.34 6.93 16 44 H 0.04 0.75 8.14 -51.93 -0.42 0.33 16 45 H 0.03 0.66 8.10 -51.93 -0.42 0.24 16 LS Contribution 394.92 15.07 5.95 5.95 Total: -1.00 -34.39 394.92 -8.61 -43.00 By element: Atomic # 1 Polarization: 6.91 SS G_CDS: -6.96 Total: -0.05 kcal Atomic # 6 Polarization: 5.60 SS G_CDS: -1.11 Total: 4.49 kcal Atomic # 7 Polarization: -59.55 SS G_CDS: -0.08 Total: -59.63 kcal Atomic # 8 Polarization: -9.80 SS G_CDS: 0.09 Total: -9.72 kcal Atomic # 14 Polarization: 22.27 SS G_CDS: -5.02 Total: 17.25 kcal Atomic # 17 Polarization: 0.18 SS G_CDS: -1.48 Total: -1.30 kcal Total LS contribution 5.95 Total: 5.95 kcal Total: -34.39 -8.61 -43.00 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000970897490.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 124.592 kcal (2) G-P(sol) polarization free energy of solvation -34.390 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 90.202 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.614 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.004 kcal (6) G-S(sol) free energy of system = (1) + (5) 81.588 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds