Wall clock time and date at job start Sat Apr 11 2020 06:01:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 H 1.08996 * 109.70578 * 2 1 4 4 C 1.53191 * 109.58837 * 239.63943 * 2 1 3 5 5 H 1.08996 * 109.49626 * 65.60154 * 4 2 1 6 6 N 1.46494 * 109.49751 * 305.53402 * 4 2 1 7 7 C 1.34775 * 120.00063 * 154.99959 * 6 4 2 8 8 O 1.21283 * 119.99956 * 359.97438 * 7 6 4 9 9 C 1.50705 * 120.00288 * 179.97438 * 7 6 4 10 10 C 1.50696 * 109.47249 * 179.97438 * 9 7 6 11 11 C 1.35303 * 126.04827 * 100.00086 * 10 9 7 12 12 N 1.34949 * 107.77028 * 179.97438 * 11 10 9 13 13 C 1.46497 * 126.02661 * 179.73224 * 12 11 10 14 14 N 1.40084 * 107.94519 * 0.02562 * 12 11 10 15 15 C 1.30904 * 108.20136 * 0.02562 * 14 12 11 16 16 Cl 1.73602 * 125.90929 * 180.02562 * 15 14 12 17 17 C 1.53039 * 109.31215 * 185.58055 * 4 2 1 18 18 C 1.53041 * 109.53998 * 61.36581 * 17 4 2 19 19 C 1.53187 * 109.31209 * 298.63619 * 18 17 4 20 20 N 1.46921 * 108.77901 * 54.63482 * 19 18 17 21 21 C 1.36933 * 120.63606 * 126.41481 * 20 19 18 22 22 H 1.08002 * 120.00006 * 209.02641 * 21 20 19 23 23 C 1.38809 * 119.99943 * 29.02253 * 21 20 19 24 24 N 1.31625 * 120.00023 * 15.06495 * 23 21 20 25 25 Si 1.86805 * 120.00300 * 195.06212 * 23 21 20 26 26 H 1.48501 * 109.47095 * 90.00146 * 25 23 21 27 27 H 1.48502 * 109.47050 * 210.00420 * 25 23 21 28 28 H 1.48498 * 109.46666 * 330.00423 * 25 23 21 29 29 H 1.08994 * 109.47594 * 180.35545 * 1 2 3 30 30 H 1.09006 * 109.47315 * 300.36184 * 1 2 3 31 31 H 1.09009 * 109.47109 * 60.35740 * 1 2 3 32 32 H 0.97005 * 120.00441 * 334.99253 * 6 4 2 33 33 H 1.09000 * 109.47150 * 59.99976 * 9 7 6 34 34 H 1.08997 * 109.47208 * 300.00095 * 9 7 6 35 35 H 1.08006 * 126.11848 * 359.97438 * 11 10 9 36 36 H 1.09004 * 109.46749 * 90.00659 * 13 12 11 37 37 H 1.09002 * 109.46878 * 209.99831 * 13 12 11 38 38 H 1.08997 * 109.47108 * 330.00311 * 13 12 11 39 39 H 1.09002 * 109.45812 * 181.38713 * 17 4 2 40 40 H 1.09003 * 109.46349 * 301.34459 * 17 4 2 41 41 H 1.08997 * 109.49569 * 178.67960 * 18 17 4 42 42 H 1.08999 * 109.49597 * 58.58623 * 18 17 4 43 43 H 1.09003 * 109.58587 * 294.84333 * 19 18 17 44 44 H 1.09000 * 109.70151 * 174.49432 * 19 18 17 45 45 H 0.97000 * 120.00339 * 179.97438 * 24 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.8975 1.0261 0.0000 4 6 2.0435 -0.7295 -1.2453 5 1 1.7656 -0.1672 -2.1368 6 7 1.4513 -2.0680 -1.3070 7 6 1.3283 -2.6965 -2.4928 8 8 1.7075 -2.1537 -3.5090 9 6 0.7197 -4.0737 -2.5563 10 6 0.6978 -4.5479 -3.9865 11 6 1.5818 -5.3988 -4.5568 12 7 1.2165 -5.5702 -5.8445 13 6 1.9020 -6.4095 -6.8303 14 7 0.0700 -4.7987 -6.0742 15 6 -0.2400 -4.1853 -4.9602 16 17 -1.5834 -3.1101 -4.7297 17 6 3.5675 -0.8481 -1.1700 18 6 3.9568 -1.6658 0.0637 19 6 3.4649 -0.9469 1.3239 20 7 2.0225 -0.6995 1.1946 21 6 1.1536 -1.1125 2.1691 22 1 0.1359 -1.3672 1.9125 23 6 1.5808 -1.2039 3.4866 24 7 2.7036 -0.6248 3.8560 25 14 0.5624 -2.1488 4.7354 26 1 0.9975 -3.5685 4.7566 27 1 0.7526 -1.5525 6.0821 28 1 -0.8726 -2.0765 4.3602 29 1 -0.3634 -1.0276 0.0064 30 1 -0.3634 0.5195 0.8868 31 1 -0.3634 0.5083 -0.8932 32 1 1.1478 -2.5020 -0.4943 33 1 -0.2990 -4.0389 -2.1698 34 1 1.3133 -4.7614 -1.9541 35 1 2.4285 -5.8586 -4.0687 36 1 1.4858 -7.4166 -6.8021 37 1 1.7642 -5.9872 -7.8256 38 1 2.9659 -6.4493 -6.5964 39 1 3.9378 -1.3450 -2.0667 40 1 4.0062 0.1472 -1.0992 41 1 5.0411 -1.7697 0.1039 42 1 3.4982 -2.6529 0.0055 43 1 3.9902 0.0020 1.4318 44 1 3.6519 -1.5696 2.1988 45 1 3.0020 -0.6883 4.7768 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000993836392.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:01:26 Heat of formation + Delta-G solvation = 57.419752 kcal Electronic energy + Delta-G solvation = -28221.160274 eV Core-core repulsion = 24302.023649 eV Total energy + Delta-G solvation = -3919.136625 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 340.141 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -41.47839 -39.53337 -37.52076 -36.75338 -33.90100 -33.62374 -32.43591 -31.99510 -31.51150 -29.51649 -28.31302 -26.38582 -25.66527 -24.97384 -22.18395 -21.42557 -21.08208 -20.70765 -19.90099 -18.65867 -17.20128 -16.79096 -16.38063 -15.69185 -15.34041 -15.16424 -15.03870 -14.80823 -14.02650 -13.89937 -13.71439 -13.56310 -13.38845 -13.18077 -13.04977 -12.84946 -12.58805 -12.53833 -11.92925 -11.77337 -11.72053 -11.54759 -11.23110 -11.19135 -10.96698 -10.70891 -10.61294 -10.56481 -10.49278 -10.09435 -10.00244 -9.63492 -9.49006 -9.34456 -9.28858 -8.55036 -8.51941 -8.36622 -6.67850 -5.81384 -3.26627 1.41703 1.59180 2.38855 2.72746 3.11838 3.33988 3.41410 3.42639 3.83401 4.29653 4.44678 4.57603 4.81367 4.92926 5.06056 5.10513 5.29901 5.33248 5.38521 5.43600 5.56767 5.61834 5.67252 5.78423 5.85052 5.99571 6.08441 6.16006 6.25807 6.38067 6.46145 6.55700 6.69346 6.69861 6.71407 6.81246 6.96585 7.00925 7.19212 7.29513 7.38891 7.67568 7.77758 8.14299 8.41861 8.77038 9.18082 9.81169 10.38331 11.26398 Molecular weight = 340.14amu Principal moments of inertia in cm(-1) A = 0.015536 B = 0.003080 C = 0.002992 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1801.818839 B = 9087.865767 C = 9355.846478 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C 0.160 3.840 3 H 0.037 0.963 4 C 0.136 3.864 5 H 0.074 0.926 6 N -0.703 5.703 7 C 0.510 3.490 8 O -0.546 6.546 9 C -0.067 4.067 10 C -0.195 4.195 11 C 0.075 3.925 12 N -0.366 5.366 13 C 0.104 3.896 14 N -0.286 5.286 15 C 0.143 3.857 16 Cl 0.007 6.993 17 C -0.120 4.120 18 C -0.139 4.139 19 C 0.171 3.829 20 N -0.586 5.586 21 C -0.254 4.254 22 H 0.071 0.929 23 C 0.005 3.995 24 N -0.901 5.901 25 Si 0.900 3.100 26 H -0.288 1.288 27 H -0.293 1.293 28 H -0.279 1.279 29 H 0.054 0.946 30 H 0.062 0.938 31 H 0.039 0.961 32 H 0.407 0.593 33 H 0.101 0.899 34 H 0.101 0.899 35 H 0.182 0.818 36 H 0.076 0.924 37 H 0.090 0.910 38 H 0.091 0.909 39 H 0.049 0.951 40 H 0.060 0.940 41 H 0.045 0.955 42 H 0.053 0.947 43 H 0.016 0.984 44 H 0.087 0.913 45 H 0.253 0.747 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.312 -10.829 -15.871 19.258 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.193 4.193 2 C 0.052 3.948 3 H 0.055 0.945 4 C 0.029 3.971 5 H 0.092 0.908 6 N -0.354 5.354 7 C 0.295 3.705 8 O -0.424 6.424 9 C -0.108 4.108 10 C -0.207 4.207 11 C -0.071 4.071 12 N -0.150 5.150 13 C -0.037 4.037 14 N -0.112 5.112 15 C -0.049 4.049 16 Cl 0.034 6.966 17 C -0.159 4.159 18 C -0.178 4.178 19 C 0.045 3.955 20 N -0.310 5.310 21 C -0.383 4.383 22 H 0.089 0.911 23 C -0.194 4.194 24 N -0.545 5.545 25 Si 0.730 3.270 26 H -0.215 1.215 27 H -0.219 1.219 28 H -0.204 1.204 29 H 0.073 0.927 30 H 0.081 0.919 31 H 0.058 0.942 32 H 0.244 0.756 33 H 0.119 0.881 34 H 0.119 0.881 35 H 0.199 0.801 36 H 0.095 0.905 37 H 0.109 0.891 38 H 0.109 0.891 39 H 0.067 0.933 40 H 0.078 0.922 41 H 0.063 0.937 42 H 0.072 0.928 43 H 0.034 0.966 44 H 0.106 0.894 45 H 0.063 0.937 Dipole moment (debyes) X Y Z Total from point charges -1.334 -10.597 -17.709 20.680 hybrid contribution -0.325 -0.409 1.967 2.035 sum -1.659 -11.007 -15.742 19.280 Atomic orbital electron populations 1.21775 0.95633 1.01511 1.00338 1.20719 0.93346 0.93853 0.86857 0.94519 1.21467 0.92702 0.83327 0.99556 0.90784 1.45985 1.61884 1.18541 1.09027 1.20444 0.79027 0.87299 0.83718 1.90660 1.49989 1.67292 1.34447 1.19957 1.03394 0.95035 0.92454 1.19237 0.98760 1.05757 0.96988 1.22288 0.99943 0.99840 0.85031 1.48136 1.21293 1.36577 1.08949 1.21913 0.96428 0.93387 0.91939 1.77319 1.01833 1.10999 1.21022 1.22457 0.93290 0.96335 0.92774 1.98392 1.41299 1.60737 1.96131 1.21760 0.95730 1.00287 0.98100 1.22125 0.98749 0.99576 0.97339 1.20807 0.83159 0.97159 0.94365 1.44167 1.03094 1.64891 1.18815 1.19179 0.94837 1.38026 0.86296 0.91097 1.25095 0.97743 0.99612 0.96976 1.70021 1.23337 1.44310 1.16864 0.86330 0.79879 0.79729 0.81030 1.21497 1.21905 1.20429 0.92676 0.91921 0.94240 0.75639 0.88123 0.88072 0.80128 0.90501 0.89105 0.89074 0.93265 0.92169 0.93658 0.92832 0.96572 0.89439 0.93677 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.42 7.72 37.15 0.29 -2.14 16 2 C 0.16 3.11 3.20 -67.60 -0.22 2.89 16 3 H 0.04 0.76 8.14 -51.93 -0.42 0.34 16 4 C 0.14 2.39 2.33 -67.81 -0.16 2.23 16 5 H 0.07 1.35 7.58 -51.93 -0.39 0.96 16 6 N -0.70 -11.29 3.46 -53.69 -0.19 -11.48 16 7 C 0.51 7.97 7.79 -10.98 -0.09 7.88 16 8 O -0.55 -10.35 15.70 5.55 0.09 -10.26 16 9 C -0.07 -0.82 6.04 -29.03 -0.18 -0.99 16 10 C -0.20 -2.53 4.60 -105.02 -0.48 -3.01 16 11 C 0.07 0.80 11.40 -17.23 -0.20 0.60 16 12 N -0.37 -3.99 4.01 -68.16 -0.27 -4.27 16 13 C 0.10 0.60 11.47 59.85 0.69 1.29 16 14 N -0.29 -4.06 12.58 32.95 0.41 -3.65 16 15 C 0.14 2.06 7.84 -17.30 -0.14 1.92 16 16 Cl 0.01 0.09 29.16 -51.86 -1.51 -1.42 16 17 C -0.12 -2.11 5.58 -26.69 -0.15 -2.26 16 18 C -0.14 -2.55 5.93 -26.61 -0.16 -2.71 16 19 C 0.17 3.82 5.29 -3.72 -0.02 3.80 16 20 N -0.59 -13.19 2.65 -164.78 -0.44 -13.62 16 21 C -0.25 -6.24 8.61 -15.06 -0.13 -6.36 16 22 H 0.07 1.69 6.20 -52.49 -0.33 1.36 16 23 C 0.00 0.12 4.96 -17.43 -0.09 0.04 16 24 N -0.90 -24.87 11.14 55.49 0.62 -24.25 16 25 Si 0.90 20.49 29.58 -169.99 -5.03 15.46 16 26 H -0.29 -6.54 7.11 56.52 0.40 -6.13 16 27 H -0.29 -6.88 7.11 56.52 0.40 -6.48 16 28 H -0.28 -6.22 7.11 56.52 0.40 -5.81 16 29 H 0.05 0.96 6.38 -51.93 -0.33 0.63 16 30 H 0.06 1.21 7.66 -51.93 -0.40 0.81 16 31 H 0.04 0.63 8.14 -51.92 -0.42 0.21 16 32 H 0.41 6.59 7.77 -40.82 -0.32 6.28 16 33 H 0.10 1.12 8.14 -51.93 -0.42 0.70 16 34 H 0.10 0.98 8.14 -51.93 -0.42 0.56 16 35 H 0.18 1.25 8.06 -52.48 -0.42 0.82 16 36 H 0.08 0.32 8.14 -51.93 -0.42 -0.11 16 37 H 0.09 0.50 8.14 -51.93 -0.42 0.08 16 38 H 0.09 0.31 8.14 -51.93 -0.42 -0.11 16 39 H 0.05 0.86 8.14 -51.93 -0.42 0.44 16 40 H 0.06 1.04 8.14 -51.93 -0.42 0.62 16 41 H 0.04 0.78 8.14 -51.93 -0.42 0.35 16 42 H 0.05 0.98 7.53 -51.93 -0.39 0.59 16 43 H 0.02 0.39 8.14 -51.93 -0.42 -0.03 16 44 H 0.09 2.20 6.06 -51.93 -0.31 1.89 16 45 H 0.25 6.84 8.31 -40.82 -0.34 6.50 16 LS Contribution 377.44 15.07 5.69 5.69 Total: -1.00 -31.82 377.44 -8.33 -40.14 By element: Atomic # 1 Polarization: 11.15 SS G_CDS: -6.68 Total: 4.47 kcal Atomic # 6 Polarization: 4.20 SS G_CDS: -1.02 Total: 3.19 kcal Atomic # 7 Polarization: -57.40 SS G_CDS: 0.14 Total: -57.26 kcal Atomic # 8 Polarization: -10.35 SS G_CDS: 0.09 Total: -10.26 kcal Atomic # 14 Polarization: 20.49 SS G_CDS: -5.03 Total: 15.46 kcal Atomic # 17 Polarization: 0.09 SS G_CDS: -1.51 Total: -1.42 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -31.82 -8.33 -40.14 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000993836392.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 97.564 kcal (2) G-P(sol) polarization free energy of solvation -31.818 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 65.745 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.326 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.144 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.420 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds