Wall clock time and date at job start Sat Apr 11 2020 06:03:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 N 1.46502 * 109.46826 * 2 1 4 4 N 1.28428 * 125.18669 * 265.62058 * 3 2 1 5 5 C 1.30840 * 110.97910 * 180.26760 * 4 3 2 6 6 C 1.39801 * 107.87828 * 359.97438 * 5 4 3 7 7 Cl 1.73599 * 127.33979 * 180.02562 * 6 5 4 8 8 C 1.36747 * 125.18359 * 85.92637 * 3 2 1 9 9 C 1.47035 * 126.90540 * 359.75382 * 8 3 2 10 10 O 1.21643 * 119.99590 * 267.06493 * 9 8 3 11 11 N 1.34773 * 120.00021 * 87.06576 * 9 8 3 12 12 C 1.46494 * 120.00031 * 184.52712 * 11 9 8 13 13 H 1.08995 * 109.46066 * 34.99833 * 12 11 9 14 14 C 1.53042 * 109.46253 * 275.02667 * 12 11 9 15 15 C 1.53186 * 109.31831 * 178.61488 * 14 12 11 16 16 N 1.46924 * 108.77573 * 54.63475 * 15 14 12 17 17 C 1.36932 * 120.63426 * 126.37249 * 16 15 14 18 18 H 1.08002 * 120.00253 * 210.76126 * 17 16 15 19 19 C 1.38813 * 119.99925 * 30.75427 * 17 16 15 20 20 N 1.31624 * 119.99798 * 11.67187 * 19 17 16 21 21 Si 1.86803 * 120.00203 * 191.67465 * 19 17 16 22 22 H 1.48496 * 109.47277 * 90.00084 * 21 19 17 23 23 H 1.48504 * 109.46958 * 210.00291 * 21 19 17 24 24 H 1.48496 * 109.46845 * 329.99812 * 21 19 17 25 25 C 1.46929 * 118.73901 * 306.39669 * 16 15 14 26 26 H 1.09002 * 109.58852 * 173.53862 * 25 16 15 27 27 C 1.53004 * 109.58463 * 293.82097 * 25 16 15 28 28 C 1.53039 * 109.46202 * 154.97206 * 12 11 9 29 29 H 1.09008 * 109.46959 * 299.99158 * 1 2 3 30 30 H 1.08996 * 109.47714 * 59.99657 * 1 2 3 31 31 H 1.09000 * 109.46761 * 179.97438 * 1 2 3 32 32 H 1.09000 * 109.46660 * 240.00693 * 2 1 3 33 33 H 1.09000 * 109.47067 * 120.00678 * 2 1 3 34 34 H 1.07997 * 126.06164 * 179.97438 * 5 4 3 35 35 H 0.97004 * 120.00109 * 4.53054 * 11 9 8 36 36 H 1.09005 * 109.49688 * 298.56914 * 14 12 11 37 37 H 1.08998 * 109.49588 * 58.66149 * 14 12 11 38 38 H 1.08997 * 109.59065 * 174.42056 * 15 14 12 39 39 H 1.09008 * 109.58525 * 294.70717 * 15 14 12 40 40 H 0.97005 * 119.99731 * 179.97438 * 20 19 17 41 41 H 1.08995 * 109.47694 * 59.99590 * 27 25 16 42 42 H 1.09000 * 109.47174 * 180.02562 * 27 25 16 43 43 H 1.09005 * 109.47047 * 299.99785 * 27 25 16 44 44 H 1.08999 * 109.50287 * 301.33865 * 28 12 11 45 45 H 1.09007 * 109.49540 * 61.43242 * 28 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3813 0.0000 4 7 2.3405 2.0523 -1.0465 5 6 2.7455 3.2544 -0.7259 6 6 2.6782 3.3731 0.6654 7 17 3.0972 4.7574 1.6256 8 6 2.2061 2.1506 1.1148 9 6 1.9569 1.7591 2.5100 10 8 0.8819 1.9991 3.0263 11 7 2.9195 1.1344 3.2168 12 6 2.6389 0.6558 4.5726 13 1 1.6066 0.3107 4.6296 14 6 2.8508 1.7969 5.5702 15 6 2.5232 1.3026 6.9826 16 7 3.3229 0.1019 7.2608 17 6 4.1094 0.0311 8.3794 18 1 5.0204 -0.5489 8.3632 19 6 3.7360 0.7048 9.5342 20 7 2.5281 1.2179 9.6353 21 14 4.9477 0.8833 10.9447 22 1 5.7327 2.1313 10.7680 23 1 4.2059 0.9428 12.2299 24 1 5.8674 -0.2824 10.9576 25 6 3.2631 -1.0213 6.3155 26 1 3.9928 -1.7789 6.6014 27 6 1.8593 -1.6299 6.3302 28 6 3.5825 -0.5007 4.9106 29 1 -0.3633 0.5137 0.8901 30 1 -0.3634 0.5138 -0.8899 31 1 -0.3633 -1.0277 -0.0005 32 1 1.8933 -0.5137 -0.8901 33 1 1.8934 -0.5139 0.8899 34 1 3.0736 4.0194 -1.4141 35 1 3.7981 1.0016 2.8277 36 1 3.8893 2.1258 5.5316 37 1 2.1953 2.6296 5.3150 38 1 2.7665 2.0796 7.7073 39 1 1.4623 1.0610 7.0483 40 1 2.2670 1.6884 10.4424 41 1 1.1317 -0.8723 6.0393 42 1 1.8172 -2.4631 5.6288 43 1 1.6292 -1.9882 7.3337 44 1 3.4480 -1.3038 4.1859 45 1 4.6141 -0.1500 4.8782 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000947342077.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:03:29 Heat of formation + Delta-G solvation = 53.717815 kcal Electronic energy + Delta-G solvation = -28229.007321 eV Core-core repulsion = 24309.710168 eV Total energy + Delta-G solvation = -3919.297153 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 340.141 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -42.86977 -39.71035 -37.75765 -36.74840 -34.87518 -34.61148 -32.62612 -31.41961 -30.56162 -30.09533 -29.39943 -26.98025 -24.79820 -24.34132 -23.35520 -22.04623 -21.93991 -21.26802 -20.13636 -18.80183 -17.97623 -16.90763 -16.52999 -16.26598 -15.78295 -15.51344 -14.88963 -14.59036 -14.45085 -14.22813 -13.80507 -13.75771 -13.66184 -13.21677 -13.09392 -12.71913 -12.54417 -12.48212 -12.26855 -12.03824 -11.88229 -11.71597 -11.45400 -11.08110 -10.96932 -10.86602 -10.70958 -10.68396 -10.41312 -10.25938 -10.18524 -9.98097 -9.78520 -9.55002 -9.42666 -8.97886 -8.86064 -8.45472 -6.67244 -5.79736 -3.27612 1.24764 1.55809 2.17556 2.23393 2.63753 3.12198 3.36594 3.43204 3.44250 4.11838 4.41084 4.46178 4.50384 4.63665 4.74407 4.95731 5.09258 5.18826 5.24285 5.32799 5.37198 5.39337 5.53311 5.70655 5.72834 5.89970 5.93974 6.01526 6.16640 6.21975 6.30891 6.34611 6.40503 6.53417 6.59708 6.77371 6.78858 6.89240 7.11151 7.36673 7.45847 7.63387 7.70985 7.78034 8.07268 8.46006 9.20361 9.81861 10.39336 11.27999 Molecular weight = 340.14amu Principal moments of inertia in cm(-1) A = 0.016675 B = 0.003088 C = 0.002772 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1678.708069 B = 9064.729742 C =10097.411430 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C 0.115 3.885 3 N -0.262 5.262 4 N -0.273 5.273 5 C 0.022 3.978 6 C -0.119 4.119 7 Cl -0.017 7.017 8 C -0.005 4.005 9 C 0.586 3.414 10 O -0.510 6.510 11 N -0.707 5.707 12 C 0.150 3.850 13 H 0.087 0.913 14 C -0.149 4.149 15 C 0.175 3.825 16 N -0.585 5.585 17 C -0.255 4.255 18 H 0.065 0.935 19 C 0.006 3.994 20 N -0.901 5.901 21 Si 0.904 3.096 22 H -0.287 1.287 23 H -0.291 1.291 24 H -0.279 1.279 25 C 0.171 3.829 26 H 0.066 0.934 27 C -0.162 4.162 28 C -0.133 4.133 29 H 0.072 0.928 30 H 0.068 0.932 31 H 0.085 0.915 32 H 0.110 0.890 33 H 0.101 0.899 34 H 0.194 0.806 35 H 0.398 0.602 36 H 0.056 0.944 37 H 0.055 0.945 38 H 0.091 0.909 39 H 0.022 0.978 40 H 0.254 0.746 41 H 0.049 0.951 42 H 0.035 0.965 43 H 0.056 0.944 44 H 0.055 0.945 45 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.102 -1.154 -21.271 21.303 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.232 4.232 2 C -0.004 4.004 3 N -0.051 5.051 4 N -0.103 5.103 5 C -0.156 4.156 6 C -0.157 4.157 7 Cl 0.011 6.989 8 C -0.136 4.136 9 C 0.367 3.633 10 O -0.383 6.383 11 N -0.358 5.358 12 C 0.048 3.952 13 H 0.105 0.895 14 C -0.189 4.189 15 C 0.049 3.951 16 N -0.306 5.306 17 C -0.384 4.384 18 H 0.082 0.918 19 C -0.193 4.193 20 N -0.545 5.545 21 Si 0.734 3.266 22 H -0.214 1.214 23 H -0.217 1.217 24 H -0.204 1.204 25 C 0.062 3.938 26 H 0.085 0.915 27 C -0.222 4.222 28 C -0.172 4.172 29 H 0.091 0.909 30 H 0.087 0.913 31 H 0.104 0.896 32 H 0.128 0.872 33 H 0.119 0.881 34 H 0.211 0.789 35 H 0.232 0.768 36 H 0.075 0.925 37 H 0.074 0.926 38 H 0.109 0.891 39 H 0.040 0.960 40 H 0.065 0.935 41 H 0.068 0.932 42 H 0.054 0.946 43 H 0.075 0.925 44 H 0.074 0.926 45 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges -0.971 -1.679 -21.528 21.616 hybrid contribution 1.142 0.879 1.252 1.909 sum 0.170 -0.800 -20.276 20.293 Atomic orbital electron populations 1.22216 0.92877 1.03998 1.04104 1.22134 0.96590 0.76049 1.05644 1.45748 1.45374 1.12339 1.01656 1.73219 1.17402 1.06184 1.13520 1.23501 1.04494 0.94929 0.92717 1.21289 1.11215 0.90437 0.92718 1.98374 1.91800 1.38353 1.70345 1.21425 1.08864 0.93072 0.90243 1.16851 0.84828 0.78551 0.83042 1.90889 1.24783 1.52392 1.70255 1.46374 1.14352 1.57718 1.17316 1.21242 1.00431 0.94994 0.78575 0.89487 1.22599 1.01143 0.96800 0.98351 1.20755 0.93451 0.90309 0.90632 1.44125 1.52207 1.10785 1.23487 1.19153 1.00617 1.30109 0.88571 0.91760 1.25153 0.95685 1.01340 0.97106 1.69983 1.16920 1.39991 1.27615 0.86279 0.80419 0.78058 0.81888 1.21435 1.21725 1.20446 1.20440 0.94991 0.90550 0.87815 0.91544 1.22308 0.99642 0.99221 1.01006 1.22325 0.99074 0.96277 0.99570 0.90904 0.91310 0.89629 0.87224 0.88107 0.78907 0.76825 0.92514 0.92648 0.89114 0.96034 0.93547 0.93241 0.94554 0.92533 0.92628 0.91704 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.37 10.24 37.16 0.38 -0.99 16 2 C 0.12 0.91 6.80 -4.04 -0.03 0.89 16 3 N -0.26 -2.90 3.35 -57.10 -0.19 -3.09 16 4 N -0.27 -3.07 11.89 30.61 0.36 -2.71 16 5 C 0.02 0.23 12.04 -17.39 -0.21 0.02 16 6 C -0.12 -1.48 6.89 -38.88 -0.27 -1.75 16 7 Cl -0.02 -0.22 29.24 -51.86 -1.52 -1.73 16 8 C -0.01 -0.07 6.72 -82.00 -0.55 -0.62 16 9 C 0.59 8.71 7.03 -12.70 -0.09 8.62 16 10 O -0.51 -9.49 16.79 5.24 0.09 -9.41 16 11 N -0.71 -9.59 5.07 -54.97 -0.28 -9.87 16 12 C 0.15 2.44 2.17 -67.89 -0.15 2.29 16 13 H 0.09 1.56 5.99 -51.93 -0.31 1.25 16 14 C -0.15 -2.88 5.65 -26.61 -0.15 -3.04 16 15 C 0.17 4.10 4.84 -3.71 -0.02 4.08 16 16 N -0.58 -13.82 2.69 -164.77 -0.44 -14.26 16 17 C -0.25 -6.71 9.58 -15.06 -0.14 -6.86 16 18 H 0.06 1.66 7.86 -52.49 -0.41 1.25 16 19 C 0.01 0.17 5.03 -17.43 -0.09 0.08 16 20 N -0.90 -25.66 11.06 55.49 0.61 -25.05 16 21 Si 0.90 21.32 29.57 -169.99 -5.03 16.30 16 22 H -0.29 -6.80 7.11 56.52 0.40 -6.40 16 23 H -0.29 -6.97 7.11 56.52 0.40 -6.57 16 24 H -0.28 -6.43 7.11 56.52 0.40 -6.03 16 25 C 0.17 3.27 3.29 -67.60 -0.22 3.04 16 26 H 0.07 1.27 7.93 -51.93 -0.41 0.86 16 27 C -0.16 -2.94 9.03 37.16 0.34 -2.61 16 28 C -0.13 -2.05 5.02 -26.61 -0.13 -2.18 16 29 H 0.07 0.77 8.14 -51.92 -0.42 0.34 16 30 H 0.07 0.55 8.14 -51.93 -0.42 0.13 16 31 H 0.08 0.48 8.14 -51.93 -0.42 0.06 16 32 H 0.11 0.63 8.14 -51.93 -0.42 0.21 16 33 H 0.10 0.73 7.91 -51.93 -0.41 0.32 16 34 H 0.19 1.41 8.06 -52.49 -0.42 0.99 16 35 H 0.40 4.47 8.59 -40.82 -0.35 4.12 16 36 H 0.06 1.11 8.14 -51.93 -0.42 0.68 16 37 H 0.05 1.11 8.11 -51.93 -0.42 0.68 16 38 H 0.09 2.42 6.09 -51.93 -0.32 2.11 16 39 H 0.02 0.54 7.51 -51.92 -0.39 0.15 16 40 H 0.25 7.06 8.31 -40.82 -0.34 6.72 16 41 H 0.05 0.93 5.73 -51.93 -0.30 0.63 16 42 H 0.04 0.54 8.14 -51.93 -0.42 0.11 16 43 H 0.06 1.14 8.14 -51.93 -0.42 0.71 16 44 H 0.06 0.71 8.14 -51.93 -0.42 0.29 16 45 H 0.06 1.00 8.14 -51.93 -0.42 0.58 16 LS Contribution 380.68 15.07 5.74 5.74 Total: -1.00 -31.24 380.68 -8.67 -39.91 By element: Atomic # 1 Polarization: 9.87 SS G_CDS: -6.68 Total: 3.19 kcal Atomic # 6 Polarization: 2.32 SS G_CDS: -1.33 Total: 0.99 kcal Atomic # 7 Polarization: -55.04 SS G_CDS: 0.06 Total: -54.98 kcal Atomic # 8 Polarization: -9.49 SS G_CDS: 0.09 Total: -9.41 kcal Atomic # 14 Polarization: 21.32 SS G_CDS: -5.03 Total: 16.30 kcal Atomic # 17 Polarization: -0.22 SS G_CDS: -1.52 Total: -1.73 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -31.24 -8.67 -39.91 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000947342077.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 93.625 kcal (2) G-P(sol) polarization free energy of solvation -31.236 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 62.388 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.671 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.907 kcal (6) G-S(sol) free energy of system = (1) + (5) 53.718 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds