Wall clock time and date at job start Sat Apr 11 2020 06:03:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.34777 * 120.00131 * 2 1 4 4 O 1.21642 * 120.00142 * 184.89683 * 3 2 1 5 5 C 1.47032 * 119.99985 * 4.89482 * 3 2 1 6 6 C 1.38541 * 126.90900 * 264.91878 * 5 3 2 7 7 Cl 1.73608 * 127.33516 * 0.02592 * 6 5 3 8 8 C 1.39798 * 105.33101 * 180.02562 * 6 5 3 9 9 N 1.30838 * 107.87564 * 0.02562 * 8 6 5 10 10 N 1.28436 * 110.98248 * 359.97438 * 9 8 6 11 11 C 1.46493 * 125.18911 * 179.97438 * 10 9 8 12 12 C 1.46500 * 119.99859 * 180.02562 * 2 1 3 13 13 H 1.09006 * 109.19950 * 179.97438 * 12 2 1 14 14 C 1.50121 * 109.20979 * 299.35705 * 12 2 1 15 15 C 1.52528 * 105.41518 * 218.02588 * 14 12 2 16 16 C 1.46238 * 114.27929 * 270.59368 * 15 14 12 17 17 N 1.50167 * 107.53046 * 58.40682 * 16 15 14 18 18 C 1.36946 * 120.53340 * 109.56780 * 17 16 15 19 19 H 1.07995 * 119.99977 * 326.50146 * 18 17 16 20 20 C 1.38812 * 119.99841 * 146.50523 * 18 17 16 21 21 N 1.31617 * 119.99939 * 153.98020 * 20 18 17 22 22 Si 1.86803 * 119.99986 * 333.97956 * 20 18 17 23 23 H 1.48496 * 109.47110 * 95.32083 * 22 20 18 24 24 H 1.48505 * 109.46986 * 215.32045 * 22 20 18 25 25 H 1.48498 * 109.47197 * 335.31984 * 22 20 18 26 26 C 1.43435 * 118.92937 * 289.58935 * 17 16 15 27 27 C 1.54844 * 109.20890 * 60.64058 * 12 2 1 28 28 H 1.09000 * 109.47166 * 85.04505 * 1 2 3 29 29 H 1.08997 * 109.47307 * 205.05170 * 1 2 3 30 30 H 1.09001 * 109.46719 * 325.05095 * 1 2 3 31 31 H 1.08001 * 126.06946 * 180.25960 * 8 6 5 32 32 H 1.09003 * 109.47411 * 85.66917 * 11 10 9 33 33 H 1.09005 * 109.47231 * 205.66306 * 11 10 9 34 34 H 1.08999 * 109.47625 * 325.66587 * 11 10 9 35 35 H 1.09004 * 110.24788 * 336.99990 * 14 12 2 36 36 H 1.08998 * 110.24645 * 99.05457 * 14 12 2 37 37 H 1.08993 * 108.52426 * 31.84011 * 15 14 12 38 38 H 1.09001 * 108.51832 * 149.35825 * 15 14 12 39 39 H 1.08994 * 109.84947 * 177.91822 * 16 15 14 40 40 H 1.09006 * 109.84355 * 298.83849 * 16 15 14 41 41 H 0.97001 * 120.00139 * 179.97438 * 21 20 18 42 42 H 1.08999 * 108.15643 * 213.28407 * 26 17 16 43 43 H 1.08996 * 108.15572 * 330.06011 * 26 17 16 44 44 H 1.09003 * 109.35689 * 320.99488 * 27 12 2 45 45 H 1.09006 * 109.36096 * 80.57813 * 27 12 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3520 1.1691 -0.0899 5 6 1.4078 2.4382 0.1086 6 6 0.9974 3.2537 -0.9334 7 17 1.2362 2.9910 -2.6328 8 6 0.3500 4.3331 -0.3252 9 7 0.3889 4.1471 0.9693 10 7 0.9971 3.0535 1.2588 11 6 1.2181 2.5437 2.6142 12 6 2.1975 -1.2687 -0.0006 13 1 3.2682 -1.0645 -0.0009 14 6 1.8425 -2.0445 1.2347 15 6 3.1391 -2.7132 1.6800 16 6 3.3667 -4.0337 1.0941 17 7 3.3779 -3.8704 -0.3986 18 6 4.5436 -4.0056 -1.1045 19 1 5.4804 -3.6980 -0.6640 20 6 4.5210 -4.5379 -2.3863 21 7 5.4651 -4.2216 -3.2470 22 14 3.1505 -5.7032 -2.8897 23 1 2.0790 -4.9393 -3.5778 24 1 3.6916 -6.7355 -3.8100 25 1 2.5915 -6.3612 -1.6815 26 6 2.1481 -3.5701 -1.0730 27 6 1.8313 -2.0678 -1.2753 28 1 -0.3633 0.0888 -1.0238 29 1 -0.3634 -0.9309 0.4351 30 1 -0.3633 0.8424 0.5887 31 1 -0.1053 5.1701 -0.8337 32 1 0.3467 1.9722 2.9340 33 1 2.0974 1.8996 2.6213 34 1 1.3745 3.3796 3.2960 35 1 1.4790 -1.3716 2.0113 36 1 1.0895 -2.7980 1.0035 37 1 3.9732 -2.0660 1.4094 38 1 3.1215 -2.8143 2.7651 39 1 4.3257 -4.4275 1.4305 40 1 2.5650 -4.7117 1.3871 41 1 5.4496 -4.5938 -4.1426 42 1 2.1726 -4.0474 -2.0527 43 1 1.3312 -4.0121 -0.5026 44 1 0.7684 -1.9472 -1.4845 45 1 2.4086 -1.6879 -2.1183 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000948377189.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:03:41 Heat of formation + Delta-G solvation = 87.177153 kcal Electronic energy + Delta-G solvation = -28910.566973 eV Core-core repulsion = 24992.720726 eV Total energy + Delta-G solvation = -3917.846247 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 340.141 amu Computer time = 2.38 seconds Orbital eigenvalues (eV) -42.87063 -40.00577 -38.00589 -36.70320 -35.55946 -33.68516 -33.24282 -31.77388 -31.21251 -30.43089 -27.49177 -27.18203 -26.32424 -24.85431 -23.53882 -22.60098 -21.95869 -20.09790 -20.00254 -18.98988 -17.92118 -17.04557 -16.58821 -16.17345 -16.10069 -15.58940 -15.38144 -14.69423 -14.55000 -14.39634 -13.87011 -13.79442 -13.46467 -13.32171 -13.11310 -13.04978 -12.96808 -12.63152 -12.43350 -12.08480 -12.03787 -11.94490 -11.86746 -11.82479 -10.91088 -10.84701 -10.70198 -10.57274 -10.49109 -10.19299 -10.07757 -9.99666 -9.71235 -9.51971 -9.49252 -8.95593 -8.62175 -8.42332 -6.88217 -5.98578 -3.34558 1.25122 1.57398 2.18249 2.23324 2.61858 2.98969 3.31430 3.47394 3.51536 4.12773 4.21235 4.53276 4.68291 4.72097 4.82252 4.91754 5.01020 5.03405 5.07502 5.12537 5.21306 5.31404 5.43869 5.46565 5.57196 5.69125 5.82004 5.87902 5.93544 6.01620 6.16343 6.23910 6.28792 6.31639 6.51725 6.54792 6.65430 6.70433 6.78739 6.85542 6.94632 7.30221 7.61577 8.00358 8.04768 8.34531 8.99985 9.73063 10.13103 11.17107 Molecular weight = 340.14amu Principal moments of inertia in cm(-1) A = 0.015928 B = 0.003699 C = 0.003305 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1757.531839 B = 7567.620897 C = 8470.603744 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.079 3.921 2 N -0.596 5.596 3 C 0.583 3.417 4 O -0.505 6.505 5 C 0.002 3.998 6 C -0.120 4.120 7 Cl -0.016 7.016 8 C 0.024 3.976 9 N -0.275 5.275 10 N -0.268 5.268 11 C 0.087 3.913 12 C 0.149 3.851 13 H 0.112 0.888 14 C -0.119 4.119 15 C -0.132 4.132 16 C 0.138 3.862 17 N -0.600 5.600 18 C -0.268 4.268 19 H 0.079 0.921 20 C 0.038 3.962 21 N -0.893 5.893 22 Si 0.873 3.127 23 H -0.286 1.286 24 H -0.302 1.302 25 H -0.271 1.271 26 C 0.153 3.847 27 C -0.147 4.147 28 H 0.060 0.940 29 H 0.080 0.920 30 H 0.058 0.942 31 H 0.195 0.805 32 H 0.090 0.910 33 H 0.097 0.903 34 H 0.102 0.898 35 H 0.059 0.941 36 H 0.071 0.929 37 H 0.066 0.934 38 H 0.048 0.952 39 H 0.068 0.932 40 H 0.031 0.969 41 H 0.263 0.737 42 H 0.045 0.955 43 H 0.031 0.969 44 H 0.054 0.946 45 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.891 13.148 10.926 22.671 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 N -0.329 5.329 3 C 0.366 3.634 4 O -0.378 6.378 5 C -0.128 4.128 6 C -0.158 4.158 7 Cl 0.012 6.988 8 C -0.154 4.154 9 N -0.105 5.105 10 N -0.056 5.056 11 C -0.053 4.053 12 C 0.048 3.952 13 H 0.130 0.870 14 C -0.157 4.157 15 C -0.171 4.171 16 C 0.014 3.986 17 N -0.323 5.323 18 C -0.396 4.396 19 H 0.096 0.904 20 C -0.163 4.163 21 N -0.534 5.534 22 Si 0.704 3.296 23 H -0.215 1.215 24 H -0.231 1.231 25 H -0.196 1.196 26 C 0.025 3.975 27 C -0.189 4.189 28 H 0.079 0.921 29 H 0.099 0.901 30 H 0.077 0.923 31 H 0.211 0.789 32 H 0.108 0.892 33 H 0.115 0.885 34 H 0.121 0.879 35 H 0.078 0.922 36 H 0.090 0.910 37 H 0.085 0.915 38 H 0.066 0.934 39 H 0.086 0.914 40 H 0.050 0.950 41 H 0.073 0.927 42 H 0.063 0.937 43 H 0.049 0.951 44 H 0.072 0.928 45 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges -14.371 13.462 11.772 22.942 hybrid contribution -0.649 -0.854 -1.504 1.848 sum -15.020 12.608 10.268 22.136 Atomic orbital electron populations 1.21721 0.79890 1.02644 1.02203 1.48222 1.06989 1.06057 1.71603 1.16942 0.86525 0.81828 0.78089 1.90916 1.12739 1.86205 1.47935 1.21374 1.05969 0.98376 0.87121 1.21261 1.09072 0.98564 0.86873 1.98377 1.95913 1.96249 1.08246 1.23498 1.03342 0.99874 0.88707 1.73223 1.15937 1.03848 1.17538 1.45470 1.38906 1.14733 1.06540 1.22277 1.04040 1.01378 0.77608 1.21514 0.98248 0.79976 0.95430 0.87020 1.21378 0.98853 0.99069 0.96396 1.20883 0.97162 1.00101 0.99001 1.20414 1.00012 0.93751 0.84432 1.44241 1.05770 1.80601 1.01704 1.18748 0.86620 1.36713 0.97528 0.90359 1.25365 0.96393 0.98158 0.96403 1.69928 1.35685 1.43012 1.04746 0.86998 0.82360 0.82338 0.77909 1.21475 1.23061 1.19646 1.20605 0.88490 0.91638 0.96785 1.23189 0.99544 0.99218 0.96960 0.92104 0.90084 0.92330 0.78853 0.89181 0.88452 0.87905 0.92246 0.91025 0.91496 0.93371 0.91351 0.95038 0.92732 0.93748 0.95082 0.92756 0.91591 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.83 8.95 59.85 0.54 1.36 16 2 N -0.60 -8.43 2.62 -175.88 -0.46 -8.89 16 3 C 0.58 9.26 6.78 -12.70 -0.09 9.17 16 4 O -0.51 -10.23 16.44 5.24 0.09 -10.14 16 5 C 0.00 0.03 4.88 -82.00 -0.40 -0.37 16 6 C -0.12 -1.54 6.89 -38.89 -0.27 -1.81 16 7 Cl -0.02 -0.22 29.24 -51.86 -1.52 -1.73 16 8 C 0.02 0.26 12.04 -17.39 -0.21 0.05 16 9 N -0.28 -3.12 11.89 30.61 0.36 -2.75 16 10 N -0.27 -2.99 3.70 -63.85 -0.24 -3.23 16 11 C 0.09 0.63 11.21 59.84 0.67 1.30 16 12 C 0.15 2.47 2.28 -68.39 -0.16 2.31 16 13 H 0.11 2.31 5.57 -51.93 -0.29 2.02 16 14 C -0.12 -1.65 4.42 -28.40 -0.13 -1.77 16 15 C -0.13 -2.05 5.20 -30.19 -0.16 -2.21 16 16 C 0.14 2.51 6.11 -5.20 -0.03 2.48 16 17 N -0.60 -13.63 2.25 -175.11 -0.39 -14.02 16 18 C -0.27 -7.36 9.96 -15.05 -0.15 -7.51 16 19 H 0.08 2.33 8.06 -52.49 -0.42 1.91 16 20 C 0.04 1.07 5.28 -17.43 -0.09 0.98 16 21 N -0.89 -27.30 13.97 55.49 0.78 -26.53 16 22 Si 0.87 21.98 25.16 -169.99 -4.28 17.71 16 23 H -0.29 -7.03 6.69 56.52 0.38 -6.65 16 24 H -0.30 -7.76 7.11 56.52 0.40 -7.36 16 25 H -0.27 -6.66 7.11 56.52 0.40 -6.26 16 26 C 0.15 3.19 4.25 -4.68 -0.02 3.17 16 27 C -0.15 -2.72 5.96 -24.78 -0.15 -2.87 16 28 H 0.06 0.64 8.14 -51.93 -0.42 0.22 16 29 H 0.08 0.73 7.30 -51.93 -0.38 0.35 16 30 H 0.06 0.54 6.95 -51.93 -0.36 0.18 16 31 H 0.19 1.43 8.06 -52.49 -0.42 1.01 16 32 H 0.09 0.47 8.14 -51.93 -0.42 0.04 16 33 H 0.10 0.76 7.67 -51.93 -0.40 0.36 16 34 H 0.10 0.57 8.14 -51.93 -0.42 0.14 16 35 H 0.06 0.69 7.93 -51.93 -0.41 0.28 16 36 H 0.07 0.97 6.28 -51.93 -0.33 0.64 16 37 H 0.07 1.20 6.93 -51.93 -0.36 0.84 16 38 H 0.05 0.62 8.14 -51.93 -0.42 0.20 16 39 H 0.07 1.27 7.99 -51.93 -0.42 0.85 16 40 H 0.03 0.53 8.13 -51.93 -0.42 0.11 16 41 H 0.26 7.63 8.31 -40.82 -0.34 7.29 16 42 H 0.04 1.05 2.77 -51.93 -0.14 0.90 16 43 H 0.03 0.57 6.88 -51.93 -0.36 0.21 16 44 H 0.05 0.85 7.14 -51.93 -0.37 0.48 16 45 H 0.07 1.42 8.14 -51.93 -0.42 1.00 16 LS Contribution 367.03 15.07 5.53 5.53 Total: -1.00 -33.87 367.03 -7.12 -40.99 By element: Atomic # 1 Polarization: 5.12 SS G_CDS: -6.35 Total: -1.23 kcal Atomic # 6 Polarization: 4.94 SS G_CDS: -0.64 Total: 4.30 kcal Atomic # 7 Polarization: -55.47 SS G_CDS: 0.05 Total: -55.42 kcal Atomic # 8 Polarization: -10.23 SS G_CDS: 0.09 Total: -10.14 kcal Atomic # 14 Polarization: 21.98 SS G_CDS: -4.28 Total: 17.71 kcal Atomic # 17 Polarization: -0.22 SS G_CDS: -1.52 Total: -1.73 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -33.87 -7.12 -40.99 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000948377189.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 128.163 kcal (2) G-P(sol) polarization free energy of solvation -33.871 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 94.293 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.116 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.986 kcal (6) G-S(sol) free energy of system = (1) + (5) 87.177 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.38 seconds