Wall clock time and date at job start Sat Apr 11 2020 06:00:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.35645 * 124.93122 * 2 1 4 4 C 1.35464 * 107.12929 * 179.74306 * 3 2 1 5 5 Cl 1.73598 * 127.24016 * 180.25417 * 4 3 2 6 6 C 1.41552 * 105.52491 * 0.41657 * 4 3 2 7 7 C 1.47659 * 126.46141 * 179.83975 * 6 4 3 8 8 O 1.21573 * 120.00430 * 359.71100 * 7 6 4 9 9 N 1.34782 * 119.99618 * 179.71178 * 7 6 4 10 10 C 1.46503 * 119.99393 * 180.02562 * 9 7 6 11 11 C 1.53010 * 109.46681 * 180.02562 * 10 9 7 12 12 H 1.09002 * 109.44832 * 64.99757 * 11 10 9 13 13 C 1.54865 * 109.42508 * 184.93565 * 11 10 9 14 14 C 1.47096 * 110.31672 * 191.27880 * 13 11 10 15 15 C 1.52559 * 114.33081 * 297.18810 * 14 13 11 16 16 C 1.50886 * 109.35149 * 85.02842 * 15 14 13 17 17 C 1.53938 * 110.09242 * 268.11520 * 16 15 14 18 18 N 1.44581 * 109.44647 * 305.04986 * 11 10 9 19 19 C 1.36936 * 118.64305 * 329.25428 * 18 11 10 20 20 H 1.08001 * 119.99699 * 332.31429 * 19 18 11 21 21 C 1.38806 * 120.00172 * 152.32685 * 19 18 11 22 22 N 1.31626 * 120.00239 * 160.16919 * 21 19 18 23 23 Si 1.86798 * 120.00152 * 340.17211 * 21 19 18 24 24 H 1.48500 * 109.47287 * 87.73212 * 23 21 19 25 25 H 1.48492 * 109.47550 * 207.73653 * 23 21 19 26 26 H 1.48503 * 109.46870 * 327.73791 * 23 21 19 27 27 N 1.28466 * 124.93567 * 180.02562 * 2 1 3 28 28 H 1.09001 * 109.47040 * 269.99739 * 1 2 3 29 29 H 1.08997 * 109.47413 * 30.00311 * 1 2 3 30 30 H 1.08997 * 109.46778 * 150.00094 * 1 2 3 31 31 H 1.07999 * 126.43314 * 0.02562 * 3 2 1 32 32 H 0.96995 * 120.00608 * 359.97438 * 9 7 6 33 33 H 1.08996 * 109.47251 * 60.00225 * 10 9 7 34 34 H 1.09005 * 109.47189 * 299.99460 * 10 9 7 35 35 H 1.09007 * 109.32733 * 311.53183 * 13 11 10 36 36 H 1.08997 * 109.33268 * 71.01396 * 13 11 10 37 37 H 1.09001 * 108.51101 * 175.93515 * 14 13 11 38 38 H 1.09000 * 108.39025 * 58.35639 * 14 13 11 39 39 H 1.09006 * 109.49125 * 325.06477 * 15 14 13 40 40 H 1.09003 * 109.49138 * 204.99314 * 15 14 13 41 41 H 1.09001 * 109.36590 * 147.92251 * 16 15 14 42 42 H 1.08993 * 109.25946 * 28.24107 * 16 15 14 43 43 H 1.09005 * 108.95007 * 279.87219 * 17 16 15 44 44 H 1.09000 * 108.94477 * 161.24769 * 17 16 15 45 45 H 0.96994 * 120.00043 * 179.97438 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2417 1.1121 0.0000 4 6 3.5315 0.6979 0.0058 5 17 4.9542 1.6926 0.0146 6 6 3.4753 -0.7165 -0.0007 7 6 4.6271 -1.6404 -0.0012 8 8 5.7601 -1.1996 -0.0011 9 7 4.4223 -2.9726 -0.0019 10 6 5.5651 -3.8893 -0.0019 11 6 5.0601 -5.3337 -0.0035 12 1 4.5309 -5.5322 -0.9355 13 6 6.2637 -6.3001 0.1222 14 6 5.8386 -7.6827 -0.1453 15 6 4.8124 -8.2272 0.8436 16 6 3.4284 -7.8164 0.4050 17 6 3.0361 -6.4850 1.0707 18 7 4.1615 -5.5306 1.1119 19 6 4.3628 -4.8020 2.2537 20 1 5.3548 -4.4582 2.5069 21 6 3.2920 -4.5054 3.0856 22 7 3.5068 -4.1648 4.3388 23 14 1.5460 -4.5899 2.4269 24 1 1.0248 -5.9718 2.5816 25 1 0.6845 -3.6481 3.1858 26 1 1.5408 -4.2169 0.9895 27 7 2.2007 -1.0532 -0.0005 28 1 -0.3633 0.0000 1.0277 29 1 -0.3634 0.8899 -0.5139 30 1 -0.3633 -0.8900 -0.5138 31 1 1.8966 2.1354 0.0004 32 1 3.5183 -3.3244 -0.0017 33 1 6.1696 -3.7163 0.8884 34 1 6.1703 -3.7155 -0.8917 35 1 7.0327 -6.0139 -0.5954 36 1 6.6732 -6.2372 1.1303 37 1 6.7181 -8.3261 -0.1207 38 1 5.4096 -7.7229 -1.1465 39 1 5.0141 -7.8240 1.8361 40 1 4.8769 -9.3150 0.8726 41 1 2.7143 -8.5883 0.6920 42 1 3.4153 -7.6966 -0.6782 43 1 2.7028 -6.6832 2.0894 44 1 2.2138 -6.0386 0.5116 45 1 2.7585 -3.9573 4.9200 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000968869635.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:00:40 Heat of formation + Delta-G solvation = 66.191467 kcal Electronic energy + Delta-G solvation = -28919.354381 eV Core-core repulsion = 25000.598126 eV Total energy + Delta-G solvation = -3918.756255 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 340.141 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -42.58042 -39.08005 -38.04418 -36.32070 -34.53271 -33.49815 -33.37436 -31.87613 -31.19955 -30.54040 -28.01894 -26.89325 -25.64637 -23.78859 -22.97814 -21.77164 -21.50170 -20.00512 -19.57737 -19.34221 -17.81899 -16.59300 -16.36175 -16.08879 -15.58406 -15.17535 -14.95213 -14.56197 -14.34221 -14.18120 -13.95708 -13.82948 -13.29132 -13.13111 -12.92623 -12.86444 -12.71868 -12.16876 -12.13931 -11.79250 -11.71457 -11.58249 -11.38445 -11.25912 -10.93420 -10.52449 -10.44591 -10.17624 -10.10884 -10.03741 -9.82910 -9.63699 -9.46294 -9.26341 -9.24695 -8.70610 -8.58305 -8.18822 -6.92289 -5.91206 -3.29459 1.71834 1.97848 2.03326 2.78293 3.31748 3.46495 3.47819 3.74644 3.95535 4.38897 4.53791 4.64356 4.83115 4.88373 5.02778 5.17049 5.26678 5.28234 5.35029 5.43578 5.50488 5.53702 5.74324 5.80563 5.90431 6.00044 6.10750 6.22397 6.26709 6.37520 6.44622 6.48723 6.53923 6.61476 6.64639 6.69852 6.77535 6.84661 6.98372 7.05750 7.21217 7.80265 8.02178 8.30645 8.39415 8.87362 9.01116 9.76905 10.05928 11.24608 Molecular weight = 340.14amu Principal moments of inertia in cm(-1) A = 0.012740 B = 0.004464 C = 0.003825 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2197.293271 B = 6270.840380 C = 7317.793128 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.089 3.911 2 N -0.285 5.285 3 C -0.009 4.009 4 C -0.102 4.102 5 Cl -0.013 7.013 6 C 0.011 3.989 7 C 0.595 3.405 8 O -0.534 6.534 9 N -0.681 5.681 10 C 0.129 3.871 11 C 0.175 3.825 12 H 0.048 0.952 13 C -0.135 4.135 14 C -0.101 4.101 15 C -0.110 4.110 16 C -0.131 4.131 17 C 0.126 3.874 18 N -0.597 5.597 19 C -0.257 4.257 20 H 0.086 0.914 21 C 0.031 3.969 22 N -0.905 5.905 23 Si 0.881 3.119 24 H -0.292 1.292 25 H -0.311 1.311 26 H -0.269 1.269 27 N -0.242 5.242 28 H 0.087 0.913 29 H 0.097 0.903 30 H 0.099 0.901 31 H 0.189 0.811 32 H 0.409 0.591 33 H 0.077 0.923 34 H 0.057 0.943 35 H 0.053 0.947 36 H 0.069 0.931 37 H 0.044 0.956 38 H 0.046 0.954 39 H 0.079 0.921 40 H 0.045 0.955 41 H 0.054 0.946 42 H 0.051 0.949 43 H 0.071 0.929 44 H 0.018 0.982 45 H 0.260 0.740 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.531 5.208 -11.652 13.910 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.052 4.052 2 N -0.073 5.073 3 C -0.153 4.153 4 C -0.140 4.140 5 Cl 0.016 6.984 6 C -0.151 4.151 7 C 0.378 3.622 8 O -0.410 6.410 9 N -0.330 5.330 10 C 0.005 3.995 11 C 0.067 3.933 12 H 0.066 0.934 13 C -0.175 4.175 14 C -0.139 4.139 15 C -0.147 4.147 16 C -0.170 4.170 17 C 0.001 3.999 18 N -0.319 5.319 19 C -0.385 4.385 20 H 0.104 0.896 21 C -0.168 4.168 22 N -0.548 5.548 23 Si 0.713 3.287 24 H -0.220 1.220 25 H -0.240 1.240 26 H -0.195 1.195 27 N -0.078 5.078 28 H 0.106 0.894 29 H 0.116 0.884 30 H 0.117 0.883 31 H 0.206 0.794 32 H 0.245 0.755 33 H 0.096 0.904 34 H 0.075 0.925 35 H 0.071 0.929 36 H 0.088 0.912 37 H 0.063 0.937 38 H 0.065 0.935 39 H 0.098 0.902 40 H 0.063 0.937 41 H 0.073 0.927 42 H 0.070 0.930 43 H 0.089 0.911 44 H 0.036 0.964 45 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges -5.524 4.703 -11.511 13.606 hybrid contribution -1.153 0.617 -0.014 1.307 sum -6.676 5.320 -11.525 14.342 Atomic orbital electron populations 1.22218 0.72597 1.05483 1.04853 1.45343 1.07860 1.02762 1.51336 1.22542 0.89449 0.94058 1.09226 1.20802 0.89095 0.91158 1.12942 1.98344 1.35931 1.67001 1.97170 1.22103 0.91402 0.92549 1.09006 1.16671 0.86087 0.81857 0.77569 1.90777 1.21842 1.77168 1.51218 1.45548 1.11366 1.04406 1.71730 1.21553 0.88095 0.88509 1.01349 1.20549 0.90777 0.91403 0.90599 0.93439 1.21328 0.98509 0.95555 1.02158 1.20296 0.98289 0.96689 0.98632 1.20971 0.94411 0.98248 1.01102 1.21850 0.97248 0.98121 0.99821 1.21685 0.89753 0.88624 0.99828 1.44021 1.32002 1.43001 1.12918 1.18801 0.94812 1.28005 0.96917 0.89605 1.25231 0.97229 0.98687 0.95689 1.69835 1.30964 1.49677 1.04308 0.87101 0.86790 0.75865 0.78947 1.22027 1.23997 1.19459 1.73758 1.02355 1.13490 1.18189 0.89419 0.88429 0.88280 0.79382 0.75512 0.90446 0.92506 0.92869 0.91237 0.93694 0.93491 0.90235 0.93663 0.92729 0.92990 0.91123 0.96434 0.93021 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.71 11.32 59.85 0.68 1.39 16 2 N -0.28 -3.85 3.72 -67.94 -0.25 -4.11 16 3 C -0.01 -0.12 11.49 -16.86 -0.19 -0.31 16 4 C -0.10 -1.69 6.80 -39.31 -0.27 -1.96 16 5 Cl -0.01 -0.21 28.17 -51.86 -1.46 -1.67 16 6 C 0.01 0.22 7.13 -82.76 -0.59 -0.37 16 7 C 0.60 12.69 7.82 -12.41 -0.10 12.59 16 8 O -0.53 -12.21 15.87 5.30 0.08 -12.13 16 9 N -0.68 -14.08 4.71 -61.30 -0.29 -14.37 16 10 C 0.13 2.50 4.52 -4.03 -0.02 2.48 16 11 C 0.18 3.22 2.19 -67.97 -0.15 3.07 16 12 H 0.05 0.83 8.06 -51.93 -0.42 0.41 16 13 C -0.13 -2.21 5.06 -28.58 -0.14 -2.35 16 14 C -0.10 -1.51 5.16 -29.79 -0.15 -1.67 16 15 C -0.11 -1.78 5.51 -28.02 -0.15 -1.93 16 16 C -0.13 -2.18 5.71 -27.30 -0.16 -2.34 16 17 C 0.13 2.59 3.96 -2.95 -0.01 2.58 16 18 N -0.60 -12.83 1.55 -164.46 -0.26 -13.08 16 19 C -0.26 -6.66 8.08 -15.06 -0.12 -6.79 16 20 H 0.09 2.48 6.90 -52.49 -0.36 2.12 16 21 C 0.03 0.85 5.16 -17.43 -0.09 0.76 16 22 N -0.91 -27.42 13.97 55.49 0.78 -26.64 16 23 Si 0.88 21.83 24.00 -169.99 -4.08 17.75 16 24 H -0.29 -7.07 6.50 56.52 0.37 -6.70 16 25 H -0.31 -8.07 7.11 56.52 0.40 -7.67 16 26 H -0.27 -6.36 6.65 56.52 0.38 -5.99 16 27 N -0.24 -4.36 11.66 33.42 0.39 -3.97 16 28 H 0.09 0.66 8.14 -51.93 -0.42 0.24 16 29 H 0.10 0.40 8.13 -51.93 -0.42 -0.02 16 30 H 0.10 0.77 8.14 -51.93 -0.42 0.35 16 31 H 0.19 1.49 8.06 -52.49 -0.42 1.07 16 32 H 0.41 8.71 7.74 -40.82 -0.32 8.40 16 33 H 0.08 1.69 6.83 -51.93 -0.35 1.33 16 34 H 0.06 0.99 8.14 -51.93 -0.42 0.57 16 35 H 0.05 0.76 8.11 -51.92 -0.42 0.34 16 36 H 0.07 1.28 8.14 -51.93 -0.42 0.86 16 37 H 0.04 0.61 8.14 -51.93 -0.42 0.19 16 38 H 0.05 0.66 7.35 -51.93 -0.38 0.27 16 39 H 0.08 1.53 7.48 -51.93 -0.39 1.14 16 40 H 0.04 0.65 8.14 -51.93 -0.42 0.22 16 41 H 0.05 0.83 8.14 -51.93 -0.42 0.41 16 42 H 0.05 0.79 7.31 -51.93 -0.38 0.42 16 43 H 0.07 1.63 5.18 -51.93 -0.27 1.36 16 44 H 0.02 0.37 5.99 -51.93 -0.31 0.06 16 45 H 0.26 7.60 8.31 -40.82 -0.34 7.26 16 LS Contribution 366.29 15.07 5.52 5.52 Total: -1.00 -33.27 366.29 -7.64 -40.91 By element: Atomic # 1 Polarization: 13.23 SS G_CDS: -6.60 Total: 6.63 kcal Atomic # 6 Polarization: 6.62 SS G_CDS: -1.47 Total: 5.15 kcal Atomic # 7 Polarization: -62.53 SS G_CDS: 0.37 Total: -62.17 kcal Atomic # 8 Polarization: -12.21 SS G_CDS: 0.08 Total: -12.13 kcal Atomic # 14 Polarization: 21.83 SS G_CDS: -4.08 Total: 17.75 kcal Atomic # 17 Polarization: -0.21 SS G_CDS: -1.46 Total: -1.67 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -33.27 -7.64 -40.91 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000968869635.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 107.103 kcal (2) G-P(sol) polarization free energy of solvation -33.272 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 73.831 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.640 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.912 kcal (6) G-S(sol) free energy of system = (1) + (5) 66.191 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds