Wall clock time and date at job start Sat Apr 11 2020 05:59:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.34951 * 126.02071 * 2 1 4 4 C 1.35306 * 107.76190 * 180.02562 * 3 2 1 5 5 C 1.50705 * 126.04616 * 179.97438 * 4 3 2 6 6 C 1.50702 * 109.46935 * 99.99719 * 5 4 3 7 7 O 1.21275 * 120.00431 * 0.02562 * 6 5 4 8 8 N 1.34775 * 119.99499 * 179.97438 * 6 5 4 9 9 C 1.46507 * 119.99794 * 179.97438 * 8 6 5 10 10 H 1.09003 * 109.46954 * 325.00202 * 9 8 6 11 11 C 1.53001 * 109.46710 * 85.00175 * 9 8 6 12 12 C 1.53004 * 109.46545 * 179.97438 * 11 9 8 13 13 C 1.52994 * 109.47412 * 300.00155 * 12 11 9 14 14 C 1.52992 * 109.47251 * 60.00320 * 13 12 11 15 15 H 1.09005 * 109.47031 * 180.02562 * 14 13 12 16 16 N 1.46498 * 109.47511 * 59.99647 * 14 13 12 17 17 C 1.36939 * 119.99613 * 85.00161 * 16 14 13 18 18 H 1.07998 * 120.00132 * 0.02562 * 17 16 14 19 19 C 1.38814 * 119.99681 * 180.02562 * 17 16 14 20 20 N 1.31621 * 119.99883 * 179.97438 * 19 17 16 21 21 Si 1.86799 * 120.00341 * 0.02562 * 19 17 16 22 22 H 1.48499 * 109.47073 * 89.99531 * 21 19 17 23 23 H 1.48497 * 109.47013 * 210.00190 * 21 19 17 24 24 H 1.48500 * 109.46758 * 329.99758 * 21 19 17 25 25 C 1.53000 * 109.46923 * 299.99682 * 14 13 12 26 26 C 1.39968 * 107.91188 * 359.97438 * 4 3 2 27 27 Cl 1.73595 * 125.91615 * 180.02562 * 26 4 3 28 28 N 1.30904 * 108.17539 * 0.02562 * 26 4 3 29 29 H 1.08997 * 109.47314 * 269.99999 * 1 2 3 30 30 H 1.09002 * 109.47469 * 30.00402 * 1 2 3 31 31 H 1.09000 * 109.47015 * 150.00501 * 1 2 3 32 32 H 1.07995 * 126.12100 * 0.05287 * 3 2 1 33 33 H 1.08996 * 109.47257 * 219.99640 * 5 4 3 34 34 H 1.08995 * 109.47099 * 339.99701 * 5 4 3 35 35 H 0.97003 * 120.00604 * 0.02562 * 8 6 5 36 36 H 1.08991 * 109.47114 * 299.99923 * 11 9 8 37 37 H 1.09000 * 109.46918 * 60.00506 * 11 9 8 38 38 H 1.09006 * 109.46857 * 179.97438 * 12 11 9 39 39 H 1.09000 * 109.46903 * 60.00737 * 12 11 9 40 40 H 1.09003 * 109.47153 * 299.99851 * 13 12 11 41 41 H 1.09005 * 109.46949 * 180.02562 * 13 12 11 42 42 H 0.96992 * 119.99979 * 265.00171 * 16 14 13 43 43 H 0.97001 * 120.00257 * 180.02562 * 20 19 17 44 44 H 1.08995 * 109.47425 * 300.00361 * 25 14 13 45 45 H 1.09000 * 109.47421 * 180.02562 * 25 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2586 1.0915 0.0000 4 6 3.5435 0.6676 -0.0006 5 6 4.7675 1.5469 -0.0013 6 6 5.3200 1.6399 1.3976 7 8 4.7741 1.0499 2.3058 8 7 6.4215 2.3779 1.6393 9 6 6.9584 2.4688 2.9995 10 1 6.1367 2.4608 3.7157 11 6 7.8784 1.2755 3.2653 12 6 8.4396 1.3708 4.6855 13 6 9.2336 2.6701 4.8340 14 6 8.3137 3.8633 4.5682 15 1 8.8796 4.7889 4.6736 16 7 7.2097 3.8529 5.5311 17 6 7.3730 4.4217 6.7661 18 1 8.3155 4.8783 7.0299 19 6 6.3271 4.4114 7.6787 20 7 6.4842 4.9576 8.8658 21 14 4.6971 3.6210 7.2226 22 1 4.7179 2.1867 7.6065 23 1 3.5949 4.3099 7.9407 24 1 4.4830 3.7383 5.7578 25 6 7.7526 3.7681 3.1480 26 6 3.5351 -0.7321 -0.0003 27 17 4.9348 -1.7589 -0.0003 28 7 2.2889 -1.1329 -0.0002 29 1 -0.3634 0.0000 1.0276 30 1 -0.3634 0.8899 -0.5139 31 1 -0.3633 -0.8900 -0.5138 32 1 1.9274 2.1194 0.0008 33 1 5.5215 1.1194 -0.6621 34 1 4.4989 2.5430 -0.3529 35 1 6.8584 2.8496 0.9130 36 1 7.3127 0.3499 3.1591 37 1 8.7000 1.2836 2.5491 38 1 9.0946 0.5204 4.8751 39 1 7.6182 1.3630 5.4020 40 1 10.0551 2.6778 4.1176 41 1 9.6338 2.7377 5.8457 42 1 6.3632 3.4431 5.2940 43 1 5.7535 4.9501 9.5038 44 1 8.5739 3.7758 2.4315 45 1 7.0975 4.6184 2.9584 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000981338770.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 05:59:42 Heat of formation + Delta-G solvation = 42.105341 kcal Electronic energy + Delta-G solvation = -27641.139516 eV Core-core repulsion = 23721.338808 eV Total energy + Delta-G solvation = -3919.800707 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 340.141 amu Computer time = 2.30 seconds Orbital eigenvalues (eV) -41.62349 -39.80759 -38.05858 -36.90302 -34.53229 -33.80567 -33.05657 -32.12044 -31.13956 -29.64808 -28.73704 -28.06457 -25.96290 -23.36943 -22.21053 -21.87490 -21.56998 -20.91377 -20.17084 -18.60540 -17.72751 -17.33262 -16.91390 -15.98625 -15.81172 -15.35660 -15.16230 -14.54721 -14.53167 -14.09324 -13.94395 -13.79551 -13.67945 -13.57967 -13.25506 -12.85805 -12.67706 -12.48683 -12.22878 -12.15748 -11.96856 -11.84879 -11.70674 -11.53608 -10.97570 -10.86849 -10.74139 -10.71249 -10.28778 -10.19572 -10.12403 -9.87612 -9.58642 -9.50560 -9.46783 -8.91136 -8.75983 -8.70567 -7.21672 -5.73097 -3.07698 1.28239 1.47049 2.21621 2.60576 2.79322 3.38027 3.43705 3.48301 3.52504 4.15939 4.44565 4.64180 4.68693 4.76133 4.89319 4.94058 5.02348 5.08359 5.16614 5.23396 5.32087 5.41909 5.47359 5.58393 5.62112 5.65215 5.76371 5.82502 5.92066 6.03355 6.03515 6.11770 6.30853 6.38881 6.46233 6.56813 6.67655 6.73566 6.79161 6.94945 7.02646 7.16867 7.64680 8.03918 8.40191 8.46337 9.25372 9.98442 10.17894 11.45318 Molecular weight = 340.14amu Principal moments of inertia in cm(-1) A = 0.012775 B = 0.003232 C = 0.002825 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2191.230298 B = 8660.217509 C = 9910.399094 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.102 3.898 2 N -0.364 5.364 3 C 0.078 3.922 4 C -0.204 4.204 5 C -0.063 4.063 6 C 0.508 3.492 7 O -0.525 6.525 8 N -0.728 5.728 9 C 0.145 3.855 10 H 0.088 0.912 11 C -0.122 4.122 12 C -0.111 4.111 13 C -0.135 4.135 14 C 0.185 3.815 15 H 0.059 0.941 16 N -0.746 5.746 17 C -0.240 4.240 18 H 0.091 0.909 19 C 0.006 3.994 20 N -0.935 5.935 21 Si 0.878 3.122 22 H -0.283 1.283 23 H -0.292 1.292 24 H -0.277 1.277 25 C -0.131 4.131 26 C 0.142 3.858 27 Cl 0.006 6.994 28 N -0.283 5.283 29 H 0.079 0.921 30 H 0.092 0.908 31 H 0.091 0.909 32 H 0.183 0.817 33 H 0.101 0.899 34 H 0.102 0.898 35 H 0.396 0.604 36 H 0.059 0.941 37 H 0.057 0.943 38 H 0.052 0.948 39 H 0.071 0.929 40 H 0.047 0.953 41 H 0.066 0.934 42 H 0.361 0.639 43 H 0.259 0.741 44 H 0.066 0.934 45 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.713 -7.525 -25.732 27.412 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.038 4.038 2 N -0.147 5.147 3 C -0.068 4.068 4 C -0.216 4.216 5 C -0.104 4.104 6 C 0.294 3.706 7 O -0.400 6.400 8 N -0.379 5.379 9 C 0.041 3.959 10 H 0.106 0.894 11 C -0.160 4.160 12 C -0.149 4.149 13 C -0.175 4.175 14 C 0.075 3.925 15 H 0.077 0.923 16 N -0.390 5.390 17 C -0.370 4.370 18 H 0.109 0.891 19 C -0.190 4.190 20 N -0.583 5.583 21 Si 0.708 3.292 22 H -0.210 1.210 23 H -0.218 1.218 24 H -0.204 1.204 25 C -0.169 4.169 26 C -0.049 4.049 27 Cl 0.034 6.966 28 N -0.108 5.108 29 H 0.098 0.902 30 H 0.110 0.890 31 H 0.110 0.890 32 H 0.200 0.800 33 H 0.119 0.881 34 H 0.120 0.880 35 H 0.229 0.771 36 H 0.078 0.922 37 H 0.076 0.924 38 H 0.071 0.929 39 H 0.089 0.911 40 H 0.065 0.935 41 H 0.085 0.915 42 H 0.195 0.805 43 H 0.069 0.931 44 H 0.085 0.915 45 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -6.878 -8.920 -24.854 27.287 hybrid contribution -0.443 0.224 -0.421 0.651 sum -7.321 -8.696 -25.275 27.713 Atomic orbital electron populations 1.21958 0.73159 1.04738 1.03985 1.48175 1.06632 1.03065 1.56779 1.22310 0.89839 0.93807 1.00831 1.19182 0.94289 0.91493 1.16670 1.19935 0.94979 1.00211 0.95320 1.20580 0.80269 0.78960 0.90830 1.90746 1.59025 1.44156 1.46083 1.46161 1.29208 1.51397 1.11163 1.21013 0.96710 0.95292 0.82858 0.89392 1.21863 0.98383 0.97944 0.97849 1.21368 1.00281 0.97424 0.95805 1.22148 0.97775 0.96198 1.01428 1.20127 0.89550 0.96230 0.86617 0.92257 1.42878 1.11504 1.70369 1.14282 1.19071 0.99823 1.29422 0.88669 0.89146 1.24626 0.97644 1.00713 0.95981 1.69697 1.32309 1.50004 1.06280 0.86656 0.85266 0.79543 0.77709 1.20994 1.21810 1.20352 1.22112 0.99473 0.96262 0.99096 1.22444 0.89131 0.90627 1.02723 1.98390 1.34130 1.67213 1.96867 1.77347 0.99931 1.08155 1.25408 0.90237 0.88961 0.89010 0.80030 0.88051 0.87975 0.77067 0.92197 0.92437 0.92939 0.91062 0.93470 0.91524 0.80480 0.93141 0.91541 0.91368 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 0.57 11.47 59.85 0.69 1.25 16 2 N -0.36 -3.76 4.01 -68.17 -0.27 -4.04 16 3 C 0.08 0.76 11.40 -17.23 -0.20 0.56 16 4 C -0.20 -2.33 4.60 -105.02 -0.48 -2.82 16 5 C -0.06 -0.59 6.04 -29.03 -0.18 -0.76 16 6 C 0.51 6.82 7.79 -10.99 -0.09 6.73 16 7 O -0.53 -9.74 15.70 5.56 0.09 -9.65 16 8 N -0.73 -8.65 5.08 -53.80 -0.27 -8.92 16 9 C 0.15 2.21 2.28 -67.93 -0.15 2.06 16 10 H 0.09 1.72 5.94 -51.93 -0.31 1.41 16 11 C -0.12 -1.82 5.50 -26.73 -0.15 -1.97 16 12 C -0.11 -1.86 5.76 -26.73 -0.15 -2.01 16 13 C -0.14 -2.29 5.61 -26.74 -0.15 -2.44 16 14 C 0.18 3.39 3.10 -67.94 -0.21 3.18 16 15 H 0.06 1.12 8.08 -51.93 -0.42 0.70 16 16 N -0.75 -17.42 4.08 -53.43 -0.22 -17.63 16 17 C -0.24 -6.72 10.41 -15.06 -0.16 -6.87 16 18 H 0.09 2.69 8.06 -52.49 -0.42 2.26 16 19 C 0.01 0.18 5.50 -17.43 -0.10 0.08 16 20 N -0.93 -29.64 13.97 55.49 0.78 -28.86 16 21 Si 0.88 23.11 27.74 -169.99 -4.71 18.39 16 22 H -0.28 -7.55 7.11 56.52 0.40 -7.15 16 23 H -0.29 -7.72 7.11 56.52 0.40 -7.32 16 24 H -0.28 -7.04 6.52 56.52 0.37 -6.67 16 25 C -0.13 -1.89 5.07 -26.73 -0.14 -2.03 16 26 C 0.14 1.90 7.84 -17.30 -0.14 1.76 16 27 Cl 0.01 0.08 29.16 -51.86 -1.51 -1.43 16 28 N -0.28 -3.84 12.58 32.94 0.41 -3.42 16 29 H 0.08 0.42 8.14 -51.93 -0.42 0.00 16 30 H 0.09 0.23 8.14 -51.93 -0.42 -0.19 16 31 H 0.09 0.44 8.14 -51.93 -0.42 0.02 16 32 H 0.18 1.05 8.06 -52.49 -0.42 0.63 16 33 H 0.10 0.75 8.14 -51.93 -0.42 0.33 16 34 H 0.10 0.62 8.14 -51.93 -0.42 0.20 16 35 H 0.40 3.22 8.60 -40.82 -0.35 2.87 16 36 H 0.06 0.97 8.14 -51.93 -0.42 0.55 16 37 H 0.06 0.74 8.14 -51.93 -0.42 0.32 16 38 H 0.05 0.80 8.14 -51.93 -0.42 0.38 16 39 H 0.07 1.42 7.60 -51.93 -0.39 1.03 16 40 H 0.05 0.67 8.14 -51.93 -0.42 0.25 16 41 H 0.07 1.26 8.14 -51.93 -0.42 0.84 16 42 H 0.36 8.62 3.92 -40.82 -0.16 8.46 16 43 H 0.26 7.85 8.31 -40.82 -0.34 7.51 16 44 H 0.07 0.76 8.14 -51.93 -0.42 0.34 16 45 H 0.07 1.00 8.14 -51.93 -0.42 0.58 16 LS Contribution 381.68 15.07 5.75 5.75 Total: -1.00 -37.46 381.68 -8.28 -45.74 By element: Atomic # 1 Polarization: 14.07 SS G_CDS: -6.72 Total: 7.34 kcal Atomic # 6 Polarization: -1.67 SS G_CDS: -1.59 Total: -3.27 kcal Atomic # 7 Polarization: -63.31 SS G_CDS: 0.42 Total: -62.88 kcal Atomic # 8 Polarization: -9.74 SS G_CDS: 0.09 Total: -9.65 kcal Atomic # 14 Polarization: 23.11 SS G_CDS: -4.71 Total: 18.39 kcal Atomic # 17 Polarization: 0.08 SS G_CDS: -1.51 Total: -1.43 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -37.46 -8.28 -45.74 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000981338770.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 87.848 kcal (2) G-P(sol) polarization free energy of solvation -37.464 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.383 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.278 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.742 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.105 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.30 seconds