Wall clock time and date at job start Sat Apr 11 2020 06:01:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 N 1.28434 * 125.18390 * 2 1 4 4 C 1.30839 * 110.98082 * 180.02562 * 3 2 1 5 5 C 1.39812 * 107.87525 * 359.77540 * 4 3 2 6 6 Cl 1.73599 * 127.33703 * 180.26718 * 5 4 3 7 7 C 1.36744 * 125.18666 * 180.02562 * 2 1 3 8 8 C 1.47029 * 126.90683 * 359.92724 * 7 2 1 9 9 O 1.21643 * 119.99889 * 260.24250 * 8 7 2 10 10 N 1.34775 * 119.99985 * 80.24208 * 8 7 2 11 11 C 1.46926 * 120.63332 * 354.47982 * 10 8 7 12 12 C 1.53194 * 108.77655 * 126.40818 * 11 10 8 13 13 C 1.53041 * 109.31071 * 54.63944 * 12 11 10 14 14 C 1.53042 * 109.53635 * 298.63250 * 13 12 11 15 15 C 1.46924 * 120.62917 * 174.49730 * 10 8 7 16 16 H 1.09002 * 109.58668 * 113.80095 * 15 10 8 17 17 C 1.52997 * 109.58647 * 353.37598 * 15 10 8 18 18 C 1.53009 * 109.47255 * 182.08232 * 17 15 10 19 19 N 1.46491 * 109.47261 * 185.08215 * 18 17 15 20 20 C 1.36937 * 120.00418 * 180.02562 * 19 18 17 21 21 H 1.08010 * 119.99636 * 0.02562 * 20 19 18 22 22 C 1.38802 * 120.00839 * 180.02562 * 20 19 18 23 23 N 1.31629 * 119.99624 * 359.97438 * 22 20 19 24 24 Si 1.86804 * 120.00524 * 179.97438 * 22 20 19 25 25 H 1.48503 * 109.46933 * 60.00087 * 24 22 20 26 26 H 1.48496 * 109.47002 * 180.02562 * 24 22 20 27 27 H 1.48496 * 109.46700 * 300.00181 * 24 22 20 28 28 H 1.09000 * 109.46701 * 274.93936 * 1 2 3 29 29 H 1.09003 * 109.47484 * 34.94250 * 1 2 3 30 30 H 1.08997 * 109.47302 * 154.94051 * 1 2 3 31 31 H 1.07999 * 126.06490 * 180.02562 * 4 3 2 32 32 H 1.09007 * 109.58466 * 6.62535 * 11 10 8 33 33 H 1.08996 * 109.70133 * 246.26873 * 11 10 8 34 34 H 1.08997 * 109.50027 * 294.68548 * 12 11 10 35 35 H 1.09004 * 109.52170 * 174.60030 * 12 11 10 36 36 H 1.08999 * 109.46264 * 178.61269 * 13 12 11 37 37 H 1.09004 * 109.46281 * 58.64632 * 13 12 11 38 38 H 1.09000 * 109.49875 * 181.31776 * 14 13 12 39 39 H 1.09000 * 109.49870 * 301.41369 * 14 13 12 40 40 H 1.08999 * 109.47542 * 302.08237 * 17 15 10 41 41 H 1.09005 * 109.47020 * 62.08633 * 17 15 10 42 42 H 1.08998 * 109.47221 * 305.08523 * 18 17 15 43 43 H 1.09007 * 109.46509 * 65.08062 * 18 17 15 44 44 H 0.97004 * 120.00124 * 0.02562 * 19 18 17 45 45 H 0.97001 * 119.99799 * 179.97438 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.2050 1.0497 0.0000 4 6 3.4734 0.7287 -0.0005 5 6 3.5630 -0.6666 0.0043 6 17 5.0078 -1.6289 0.0122 7 6 2.2530 -1.1176 -0.0005 8 6 1.8009 -2.5166 0.0004 9 8 1.7849 -3.1500 1.0388 10 7 1.4043 -3.0974 -1.1494 11 6 1.3029 -2.3135 -2.3879 12 6 2.1198 -3.0102 -3.4807 13 6 1.6518 -4.4611 -3.6150 14 6 1.8842 -5.1982 -2.2942 15 6 1.0647 -4.5263 -1.1879 16 1 0.0016 -4.6437 -1.3982 17 6 1.3980 -5.1693 0.1598 18 6 1.0920 -6.6672 0.0999 19 7 1.2955 -7.2605 1.4237 20 6 1.0813 -8.5996 1.6143 21 1 0.7627 -9.2184 0.7883 22 6 1.2736 -9.1617 2.8687 23 7 1.6623 -8.4077 3.8752 24 14 0.9807 -10.9883 3.1287 25 1 1.8861 -11.7655 2.2447 26 1 1.2532 -11.3364 4.5463 27 1 -0.4306 -11.3146 2.8018 28 1 -0.3633 0.0885 1.0239 29 1 -0.3634 0.8424 -0.5886 30 1 -0.3634 -0.9309 -0.4353 31 1 4.3040 1.4190 -0.0003 32 1 1.6976 -1.3115 -2.2195 33 1 0.2597 -2.2482 -2.6971 34 1 3.1762 -2.9920 -3.2126 35 1 1.9761 -2.4923 -4.4290 36 1 2.2146 -4.9522 -4.4089 37 1 0.5895 -4.4789 -3.8587 38 1 1.5723 -6.2375 -2.3977 39 1 2.9428 -5.1595 -2.0373 40 1 2.4554 -5.0230 0.3806 41 1 0.7961 -4.7065 0.9419 42 1 0.0572 -6.8146 -0.2092 43 1 1.7575 -7.1455 -0.6189 44 1 1.5820 -6.7049 2.1654 45 1 1.7963 -8.8005 4.7519 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001715188199.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:01:34 Heat of formation + Delta-G solvation = 66.577785 kcal Electronic energy + Delta-G solvation = -28307.985926 eV Core-core repulsion = 24389.246423 eV Total energy + Delta-G solvation = -3918.739503 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 340.141 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -42.93344 -40.46944 -37.52804 -36.72849 -35.24001 -33.78584 -33.13996 -32.84023 -30.97968 -30.48025 -27.91280 -27.49728 -25.43961 -24.24557 -23.40843 -22.13190 -21.99254 -20.82587 -20.66850 -19.38042 -17.92220 -17.02577 -16.76046 -16.18603 -16.12027 -15.42629 -14.82680 -14.74018 -14.68341 -14.53030 -14.27076 -13.87020 -13.56375 -13.46813 -13.28571 -13.21219 -13.08079 -12.99426 -12.69505 -12.15137 -12.06929 -11.88388 -11.47661 -11.31490 -11.17419 -10.93075 -10.81669 -10.78768 -10.72970 -10.48352 -10.41948 -9.98828 -9.62151 -9.59288 -9.13817 -8.91527 -8.78941 -8.67576 -6.79513 -5.65007 -2.93619 1.20005 1.54693 2.12939 2.21917 2.49922 2.84009 3.49840 3.53390 3.55326 3.98283 4.15417 4.46397 4.60839 4.66122 4.66784 4.70122 4.73118 4.90675 4.95194 5.00588 5.05742 5.08474 5.16081 5.28141 5.47807 5.53290 5.65384 5.70424 5.71545 5.85184 5.90995 5.93357 6.06250 6.19857 6.24491 6.33212 6.34235 6.52500 6.59881 7.03551 7.07736 7.20738 7.58247 7.77508 7.95735 8.53797 9.64184 10.25770 10.60376 11.57768 Molecular weight = 340.14amu Principal moments of inertia in cm(-1) A = 0.013463 B = 0.003123 C = 0.002900 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2079.232030 B = 8962.465062 C = 9651.553865 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.086 3.914 2 N -0.270 5.270 3 N -0.274 5.274 4 C 0.024 3.976 5 C -0.117 4.117 6 Cl -0.016 7.016 7 C -0.002 4.002 8 C 0.583 3.417 9 O -0.483 6.483 10 N -0.596 5.596 11 C 0.107 3.893 12 C -0.134 4.134 13 C -0.120 4.120 14 C -0.134 4.134 15 C 0.154 3.846 16 H 0.077 0.923 17 C -0.120 4.120 18 C 0.150 3.850 19 N -0.731 5.731 20 C -0.239 4.239 21 H 0.068 0.932 22 C -0.015 4.015 23 N -0.932 5.932 24 Si 0.906 3.094 25 H -0.287 1.287 26 H -0.291 1.291 27 H -0.287 1.287 28 H 0.092 0.908 29 H 0.103 0.897 30 H 0.095 0.905 31 H 0.195 0.805 32 H 0.076 0.924 33 H 0.072 0.928 34 H 0.070 0.930 35 H 0.073 0.927 36 H 0.066 0.934 37 H 0.064 0.936 38 H 0.085 0.915 39 H 0.070 0.930 40 H 0.069 0.931 41 H 0.092 0.908 42 H 0.013 0.987 43 H 0.016 0.984 44 H 0.386 0.614 45 H 0.255 0.745 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.294 21.669 -17.402 27.793 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.054 4.054 2 N -0.058 5.058 3 N -0.105 5.105 4 C -0.155 4.155 5 C -0.155 4.155 6 Cl 0.013 6.987 7 C -0.132 4.132 8 C 0.366 3.634 9 O -0.354 6.354 10 N -0.330 5.330 11 C -0.016 4.016 12 C -0.172 4.172 13 C -0.157 4.157 14 C -0.172 4.172 15 C 0.052 3.948 16 H 0.095 0.905 17 C -0.158 4.158 18 C 0.022 3.978 19 N -0.375 5.375 20 C -0.370 4.370 21 H 0.086 0.914 22 C -0.211 4.211 23 N -0.581 5.581 24 Si 0.737 3.263 25 H -0.213 1.213 26 H -0.217 1.217 27 H -0.214 1.214 28 H 0.111 0.889 29 H 0.121 0.879 30 H 0.113 0.887 31 H 0.212 0.788 32 H 0.095 0.905 33 H 0.090 0.910 34 H 0.089 0.911 35 H 0.092 0.908 36 H 0.085 0.915 37 H 0.082 0.918 38 H 0.104 0.896 39 H 0.088 0.912 40 H 0.088 0.912 41 H 0.110 0.890 42 H 0.031 0.969 43 H 0.034 0.966 44 H 0.219 0.781 45 H 0.065 0.935 Dipole moment (debyes) X Y Z Total from point charges -1.139 21.964 -16.833 27.696 hybrid contribution 0.704 -1.475 0.377 1.677 sum -0.435 20.489 -16.456 26.283 Atomic orbital electron populations 1.22291 0.72230 1.05451 1.05428 1.45524 1.07632 1.01560 1.51116 1.73226 1.03279 1.13306 1.20651 1.23515 0.93885 0.92657 1.05405 1.21253 0.87506 0.92525 1.14231 1.98377 1.32893 1.70230 1.97211 1.21489 0.90949 0.89840 1.10969 1.17027 0.78253 0.83754 0.84362 1.91050 1.50840 1.61737 1.31759 1.48150 1.66037 1.10723 1.08114 1.21747 1.00575 0.94843 0.84450 1.21900 1.00585 0.96647 0.98063 1.21542 1.01439 0.94855 0.97888 1.22080 1.01235 1.00187 0.93716 1.21423 0.98644 0.77221 0.97531 0.90507 1.22287 1.03537 0.95520 0.94458 1.20762 0.96848 0.90741 0.89435 1.42345 1.82010 1.07015 1.06143 1.19189 1.38078 0.85161 0.94569 0.91371 1.24747 1.02589 0.97817 0.95955 1.69678 1.53234 1.34419 1.00734 0.86281 0.77837 0.85394 0.76755 1.21340 1.21717 1.21358 0.88943 0.87879 0.88674 0.78849 0.90524 0.90981 0.91143 0.90792 0.91484 0.91753 0.89607 0.91160 0.91212 0.88995 0.96946 0.96614 0.78069 0.93540 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.57 11.22 59.85 0.67 1.24 16 2 N -0.27 -2.81 3.62 -63.85 -0.23 -3.04 16 3 N -0.27 -2.96 11.89 30.61 0.36 -2.60 16 4 C 0.02 0.24 12.04 -17.39 -0.21 0.03 16 5 C -0.12 -1.43 6.89 -38.88 -0.27 -1.70 16 6 Cl -0.02 -0.20 29.24 -51.86 -1.52 -1.71 16 7 C 0.00 -0.03 4.72 -82.00 -0.39 -0.41 16 8 C 0.58 8.34 6.63 -12.70 -0.08 8.26 16 9 O -0.48 -9.03 12.65 5.24 0.07 -8.96 16 10 N -0.60 -7.03 2.97 -166.63 -0.50 -7.53 16 11 C 0.11 0.89 6.35 -3.71 -0.02 0.86 16 12 C -0.13 -1.04 6.08 -26.61 -0.16 -1.20 16 13 C -0.12 -1.01 5.88 -26.69 -0.16 -1.17 16 14 C -0.13 -1.56 4.81 -26.61 -0.13 -1.68 16 15 C 0.15 2.03 3.03 -67.60 -0.21 1.83 16 16 H 0.08 0.94 8.14 -51.93 -0.42 0.51 16 17 C -0.12 -2.19 3.29 -26.73 -0.09 -2.28 16 18 C 0.15 3.19 5.72 -4.04 -0.02 3.17 16 19 N -0.73 -19.96 5.60 -59.91 -0.34 -20.30 16 20 C -0.24 -7.02 9.99 -15.06 -0.15 -7.17 16 21 H 0.07 1.92 7.83 -52.48 -0.41 1.51 16 22 C -0.02 -0.46 5.50 -17.43 -0.10 -0.55 16 23 N -0.93 -29.65 13.06 55.49 0.72 -28.93 16 24 Si 0.91 23.16 29.55 -169.99 -5.02 18.14 16 25 H -0.29 -7.17 7.11 56.52 0.40 -6.77 16 26 H -0.29 -7.48 7.11 56.52 0.40 -7.07 16 27 H -0.29 -7.16 7.11 56.52 0.40 -6.76 16 28 H 0.09 0.58 8.14 -51.93 -0.42 0.16 16 29 H 0.10 0.43 8.14 -51.93 -0.42 0.01 16 30 H 0.09 0.57 7.66 -51.93 -0.40 0.18 16 31 H 0.19 1.37 8.06 -52.49 -0.42 0.94 16 32 H 0.08 0.64 6.22 -51.92 -0.32 0.32 16 33 H 0.07 0.47 8.14 -51.93 -0.42 0.04 16 34 H 0.07 0.63 8.14 -51.93 -0.42 0.21 16 35 H 0.07 0.43 8.14 -51.93 -0.42 0.01 16 36 H 0.07 0.52 8.14 -51.93 -0.42 0.10 16 37 H 0.06 0.49 8.14 -51.93 -0.42 0.07 16 38 H 0.09 1.03 6.86 -51.93 -0.36 0.68 16 39 H 0.07 0.91 8.14 -51.93 -0.42 0.49 16 40 H 0.07 1.42 7.22 -51.93 -0.37 1.04 16 41 H 0.09 1.88 6.25 -51.93 -0.32 1.56 16 42 H 0.01 0.26 8.14 -51.93 -0.42 -0.16 16 43 H 0.02 0.33 6.83 -51.92 -0.35 -0.02 16 44 H 0.39 11.32 7.67 -40.82 -0.31 11.01 16 45 H 0.25 7.82 8.31 -40.82 -0.34 7.48 16 LS Contribution 376.39 15.07 5.67 5.67 Total: -1.00 -35.78 376.39 -8.72 -44.50 By element: Atomic # 1 Polarization: 12.17 SS G_CDS: -6.64 Total: 5.53 kcal Atomic # 6 Polarization: 0.53 SS G_CDS: -1.31 Total: -0.78 kcal Atomic # 7 Polarization: -62.42 SS G_CDS: 0.03 Total: -62.39 kcal Atomic # 8 Polarization: -9.03 SS G_CDS: 0.07 Total: -8.96 kcal Atomic # 14 Polarization: 23.16 SS G_CDS: -5.02 Total: 18.14 kcal Atomic # 17 Polarization: -0.20 SS G_CDS: -1.52 Total: -1.71 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -35.78 -8.72 -44.50 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001715188199.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 111.082 kcal (2) G-P(sol) polarization free energy of solvation -35.780 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 75.303 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.725 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.504 kcal (6) G-S(sol) free energy of system = (1) + (5) 66.578 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds