Wall clock time and date at job start Sat Apr 11 2020 06:02:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 N 1.46496 * 109.47071 * 2 1 4 4 N 1.28436 * 125.19373 * 275.27655 * 3 2 1 5 5 C 1.30832 * 110.98200 * 180.31742 * 4 3 2 6 6 C 1.39802 * 107.87777 * 359.71817 * 5 4 3 7 7 Cl 1.73605 * 127.33738 * 179.97438 * 6 5 4 8 8 C 1.36751 * 125.18323 * 95.11286 * 3 2 1 9 9 C 1.47031 * 126.90660 * 359.96031 * 8 3 2 10 10 O 1.21643 * 119.99685 * 267.29233 * 9 8 3 11 11 N 1.34774 * 120.00190 * 87.28586 * 9 8 3 12 12 C 1.47025 * 125.64839 * 354.76977 * 11 9 8 13 13 C 1.54368 * 107.28880 * 178.87003 * 12 11 9 14 14 C 1.55162 * 102.92151 * 337.86207 * 13 12 11 15 15 H 1.09002 * 110.99948 * 277.36543 * 14 13 12 16 16 C 1.52999 * 111.00769 * 153.54683 * 14 13 12 17 17 H 1.09005 * 109.46779 * 63.17963 * 16 14 13 18 18 C 1.52998 * 109.46991 * 303.17759 * 16 14 13 19 19 N 1.46500 * 109.47144 * 183.17941 * 16 14 13 20 20 C 1.36936 * 119.99611 * 205.27541 * 19 16 14 21 21 H 1.07995 * 120.00080 * 359.72382 * 20 19 16 22 22 C 1.38816 * 119.99809 * 179.72053 * 20 19 16 23 23 N 1.31617 * 120.00111 * 179.97438 * 22 20 19 24 24 Si 1.86800 * 119.99879 * 0.02562 * 22 20 19 25 25 H 1.48505 * 109.47289 * 89.99796 * 24 22 20 26 26 H 1.48498 * 109.47078 * 209.99330 * 24 22 20 27 27 H 1.48497 * 109.47326 * 329.99549 * 24 22 20 28 28 C 1.47421 * 125.64686 * 174.72206 * 11 9 8 29 29 H 1.09002 * 109.47622 * 55.02952 * 1 2 3 30 30 H 1.09001 * 109.47645 * 175.03313 * 1 2 3 31 31 H 1.09007 * 109.47131 * 295.03381 * 1 2 3 32 32 H 1.09005 * 109.46784 * 240.00524 * 2 1 3 33 33 H 1.08999 * 109.47228 * 120.00769 * 2 1 3 34 34 H 1.08002 * 126.06003 * 179.73514 * 5 4 3 35 35 H 1.09000 * 109.87985 * 298.31617 * 12 11 9 36 36 H 1.09000 * 109.88281 * 59.32794 * 12 11 9 37 37 H 1.08997 * 110.75704 * 219.49580 * 13 12 11 38 38 H 1.09000 * 110.70596 * 96.20351 * 13 12 11 39 39 H 1.08992 * 109.47476 * 300.00404 * 18 16 14 40 40 H 1.09005 * 109.46742 * 60.00020 * 18 16 14 41 41 H 1.08998 * 109.47312 * 179.97438 * 18 16 14 42 42 H 0.96994 * 119.99792 * 25.00034 * 19 16 14 43 43 H 0.96997 * 119.99803 * 179.97438 * 23 22 20 44 44 H 1.09000 * 110.36733 * 85.33030 * 28 11 9 45 45 H 1.08994 * 110.46447 * 323.05168 * 28 11 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 7 2.1740 2.1113 -1.0451 5 6 2.6309 3.2949 -0.7259 6 6 2.7801 3.3370 0.6635 7 17 3.3521 4.6672 1.6212 8 6 2.3748 2.0909 1.1132 9 6 2.3409 1.6233 2.5068 10 8 1.3559 1.8240 3.1918 11 7 3.4010 0.9722 3.0252 12 6 4.6048 0.5684 2.2840 13 6 5.5540 -0.1179 3.2894 14 6 5.0747 0.4402 4.6556 15 1 5.5104 1.4198 4.8519 16 6 5.3941 -0.5361 5.7895 17 1 6.4744 -0.6547 5.8732 18 6 4.7536 -1.8929 5.4897 19 7 4.8611 -0.0123 7.0495 20 6 5.4246 -0.3877 8.2398 21 1 6.2589 -1.0733 8.2499 22 6 4.9234 0.1132 9.4335 23 7 5.4645 -0.2480 10.5776 24 14 3.4798 1.2987 9.4161 25 1 2.2096 0.5331 9.4917 26 1 3.5765 2.2135 10.5818 27 1 3.5058 2.0918 8.1609 28 6 3.5459 0.5478 4.4295 29 1 -0.3634 0.5890 -0.8421 30 1 -0.3634 -1.0238 -0.0890 31 1 -0.3634 0.4349 0.9312 32 1 1.8933 -0.5138 -0.8901 33 1 1.8933 -0.5139 0.8899 34 1 2.8532 4.0973 -1.4138 35 1 4.3355 -0.1302 1.4918 36 1 5.0881 1.4464 1.8553 37 1 6.5891 0.1655 3.0989 38 1 5.4365 -1.2010 3.2527 39 1 3.6734 -1.7743 5.4059 40 1 5.1502 -2.2826 4.5521 41 1 4.9815 -2.5886 6.2973 42 1 4.1118 0.6035 7.0404 43 1 5.1145 0.1023 11.4117 44 1 3.0705 -0.4208 4.5841 45 1 3.1150 1.2922 5.0990 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001716961264.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:02:30 Heat of formation + Delta-G solvation = 60.526433 kcal Electronic energy + Delta-G solvation = -28109.311508 eV Core-core repulsion = 24190.309599 eV Total energy + Delta-G solvation = -3919.001909 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 340.141 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -42.98789 -40.15384 -38.08956 -36.85679 -35.43054 -34.97106 -32.69837 -31.39417 -30.64168 -30.19182 -29.24227 -28.01865 -25.19097 -24.46200 -23.77273 -22.52722 -21.78993 -21.67032 -19.62613 -19.11548 -18.31255 -17.50565 -16.76993 -16.64847 -16.16309 -15.77277 -15.22360 -14.77754 -14.62860 -14.48472 -14.16452 -14.01931 -13.85507 -13.35388 -13.21684 -12.91724 -12.82252 -12.61675 -12.48612 -12.37642 -12.16201 -11.99297 -11.97593 -11.80202 -11.38609 -11.12985 -10.94866 -10.80610 -10.63659 -10.50077 -10.49366 -10.26782 -9.99444 -9.64896 -9.60530 -9.07936 -8.97497 -8.81669 -7.31894 -5.79390 -3.15602 1.13382 1.43847 2.02560 2.12379 2.42300 2.77545 3.38249 3.42044 3.46866 3.93255 4.02725 4.39415 4.45233 4.52613 4.57113 4.58943 4.64082 4.78010 4.87455 4.99974 5.09683 5.12661 5.24379 5.27923 5.36418 5.50643 5.53528 5.56996 5.61653 5.75355 5.76846 5.79939 5.95383 5.95896 6.04374 6.17754 6.23135 6.35518 6.45687 6.67339 6.94888 7.17828 7.53511 7.75103 7.95728 8.39430 9.17383 9.90208 10.08746 11.38760 Molecular weight = 340.14amu Principal moments of inertia in cm(-1) A = 0.014793 B = 0.003200 C = 0.003024 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1892.343934 B = 8748.987567 C = 9256.515646 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C 0.116 3.884 3 N -0.262 5.262 4 N -0.271 5.271 5 C 0.024 3.976 6 C -0.118 4.118 7 Cl -0.018 7.018 8 C 0.000 4.000 9 C 0.601 3.399 10 O -0.512 6.512 11 N -0.601 5.601 12 C 0.100 3.900 13 C -0.128 4.128 14 C -0.106 4.106 15 H 0.088 0.912 16 C 0.190 3.810 17 H 0.063 0.937 18 C -0.172 4.172 19 N -0.749 5.749 20 C -0.245 4.245 21 H 0.091 0.909 22 C 0.007 3.993 23 N -0.933 5.933 24 Si 0.880 3.120 25 H -0.283 1.283 26 H -0.290 1.290 27 H -0.277 1.277 28 C 0.105 3.895 29 H 0.070 0.930 30 H 0.085 0.915 31 H 0.069 0.931 32 H 0.109 0.891 33 H 0.100 0.900 34 H 0.195 0.805 35 H 0.063 0.937 36 H 0.070 0.930 37 H 0.085 0.915 38 H 0.088 0.912 39 H 0.048 0.952 40 H 0.043 0.957 41 H 0.060 0.940 42 H 0.361 0.639 43 H 0.260 0.740 44 H 0.085 0.915 45 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.348 1.696 -27.140 27.539 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C -0.004 4.004 3 N -0.051 5.051 4 N -0.101 5.101 5 C -0.154 4.154 6 C -0.156 4.156 7 Cl 0.011 6.989 8 C -0.130 4.130 9 C 0.384 3.616 10 O -0.385 6.385 11 N -0.335 5.335 12 C -0.023 4.023 13 C -0.166 4.166 14 C -0.126 4.126 15 H 0.106 0.894 16 C 0.080 3.920 17 H 0.081 0.919 18 C -0.232 4.232 19 N -0.392 5.392 20 C -0.374 4.374 21 H 0.109 0.891 22 C -0.189 4.189 23 N -0.581 5.581 24 Si 0.710 3.290 25 H -0.210 1.210 26 H -0.217 1.217 27 H -0.203 1.203 28 C -0.016 4.016 29 H 0.089 0.911 30 H 0.104 0.896 31 H 0.088 0.912 32 H 0.127 0.873 33 H 0.118 0.882 34 H 0.212 0.788 35 H 0.081 0.919 36 H 0.088 0.912 37 H 0.104 0.896 38 H 0.106 0.894 39 H 0.067 0.933 40 H 0.062 0.938 41 H 0.079 0.921 42 H 0.194 0.806 43 H 0.070 0.930 44 H 0.103 0.897 45 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -5.140 1.024 -27.420 27.916 hybrid contribution -0.750 1.595 0.844 1.954 sum -5.890 2.619 -26.576 27.347 Atomic orbital electron populations 1.22191 0.92808 1.03967 1.04049 1.22131 0.96763 0.75981 1.05494 1.45750 1.45421 1.12274 1.01685 1.73216 1.19218 1.04229 1.13396 1.23508 1.03516 0.95718 0.92678 1.21251 1.10951 0.90636 0.92730 1.98374 1.87072 1.42910 1.70551 1.21207 1.08537 0.93595 0.89657 1.16444 0.82655 0.78233 0.84230 1.90898 1.31662 1.55441 1.60533 1.48480 1.17577 1.55321 1.12089 1.22125 0.85681 0.99282 0.95183 1.22817 0.98912 1.01255 0.93599 1.22777 0.93530 1.01264 0.95025 0.89366 1.20047 0.97535 0.90287 0.84101 0.91932 1.22593 1.00629 0.99846 1.00123 1.42805 1.39049 1.55410 1.01903 1.19045 1.12951 1.22977 0.82449 0.89110 1.24653 0.99036 0.99985 0.95223 1.69694 1.43499 1.47998 0.96869 0.86628 0.83663 0.81660 0.77050 1.20972 1.21668 1.20287 1.22616 0.97569 1.01208 0.80182 0.91077 0.89631 0.91189 0.87296 0.88220 0.78804 0.91871 0.91156 0.89600 0.89391 0.93259 0.93779 0.92097 0.80625 0.93024 0.89725 0.90162 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.21 10.24 37.16 0.38 -0.83 16 2 C 0.12 0.84 6.91 -4.05 -0.03 0.82 16 3 N -0.26 -2.72 3.35 -57.11 -0.19 -2.91 16 4 N -0.27 -2.84 11.89 30.61 0.36 -2.47 16 5 C 0.02 0.24 12.04 -17.39 -0.21 0.03 16 6 C -0.12 -1.39 6.89 -38.88 -0.27 -1.65 16 7 Cl -0.02 -0.21 29.24 -51.86 -1.52 -1.73 16 8 C 0.00 0.01 5.90 -82.00 -0.48 -0.48 16 9 C 0.60 8.68 6.94 -12.70 -0.09 8.59 16 10 O -0.51 -9.29 17.41 5.24 0.09 -9.20 16 11 N -0.60 -7.74 3.33 -171.91 -0.57 -8.31 16 12 C 0.10 0.98 6.47 -3.04 -0.02 0.96 16 13 C -0.13 -1.25 6.31 -24.87 -0.16 -1.41 16 14 C -0.11 -1.46 3.07 -88.47 -0.27 -1.73 16 15 H 0.09 1.30 8.14 -51.93 -0.42 0.88 16 16 C 0.19 3.24 2.84 -67.93 -0.19 3.04 16 17 H 0.06 1.10 8.08 -51.93 -0.42 0.68 16 18 C -0.17 -2.63 8.85 37.16 0.33 -2.30 16 19 N -0.75 -16.74 4.87 -53.43 -0.26 -17.00 16 20 C -0.24 -6.65 10.41 -15.06 -0.16 -6.81 16 21 H 0.09 2.63 8.06 -52.49 -0.42 2.21 16 22 C 0.01 0.20 5.50 -17.43 -0.10 0.11 16 23 N -0.93 -28.99 13.97 55.49 0.78 -28.21 16 24 Si 0.88 22.22 27.74 -169.99 -4.71 17.50 16 25 H -0.28 -7.14 7.11 56.52 0.40 -6.74 16 26 H -0.29 -7.45 7.11 56.52 0.40 -7.05 16 27 H -0.28 -6.65 6.52 56.52 0.37 -6.28 16 28 C 0.11 1.53 5.67 -2.53 -0.01 1.52 16 29 H 0.07 0.52 8.14 -51.93 -0.42 0.10 16 30 H 0.08 0.40 8.14 -51.93 -0.42 -0.02 16 31 H 0.07 0.65 8.14 -51.92 -0.42 0.22 16 32 H 0.11 0.55 8.14 -51.93 -0.42 0.13 16 33 H 0.10 0.69 7.65 -51.93 -0.40 0.30 16 34 H 0.20 1.28 8.06 -52.49 -0.42 0.85 16 35 H 0.06 0.51 8.14 -51.93 -0.42 0.09 16 36 H 0.07 0.68 8.14 -51.93 -0.42 0.26 16 37 H 0.09 0.73 8.14 -51.93 -0.42 0.31 16 38 H 0.09 0.79 5.74 -51.93 -0.30 0.50 16 39 H 0.05 0.75 6.04 -51.93 -0.31 0.43 16 40 H 0.04 0.53 6.07 -51.93 -0.32 0.21 16 41 H 0.06 1.06 8.14 -51.93 -0.42 0.64 16 42 H 0.36 8.13 4.93 -40.82 -0.20 7.93 16 43 H 0.26 7.72 8.31 -40.82 -0.34 7.38 16 44 H 0.08 1.22 5.66 -51.93 -0.29 0.93 16 45 H 0.08 1.36 7.84 -51.93 -0.41 0.95 16 LS Contribution 380.28 15.07 5.73 5.73 Total: -1.00 -33.80 380.28 -8.03 -41.84 By element: Atomic # 1 Polarization: 11.37 SS G_CDS: -6.46 Total: 4.90 kcal Atomic # 6 Polarization: 1.13 SS G_CDS: -1.28 Total: -0.15 kcal Atomic # 7 Polarization: -59.02 SS G_CDS: 0.12 Total: -58.90 kcal Atomic # 8 Polarization: -9.29 SS G_CDS: 0.09 Total: -9.20 kcal Atomic # 14 Polarization: 22.22 SS G_CDS: -4.71 Total: 17.50 kcal Atomic # 17 Polarization: -0.21 SS G_CDS: -1.52 Total: -1.73 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -33.80 -8.03 -41.84 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001716961264.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 102.366 kcal (2) G-P(sol) polarization free energy of solvation -33.805 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 68.561 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.035 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.840 kcal (6) G-S(sol) free energy of system = (1) + (5) 60.526 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds