Wall clock time and date at job start Sat Apr 11 2020 06:13:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09001 * 109.47364 * 2 1 4 4 C 1.53003 * 109.47695 * 239.99143 * 2 1 3 5 5 N 1.46898 * 109.47109 * 179.97438 * 4 2 1 6 6 C 1.46908 * 110.99585 * 179.97438 * 5 4 2 7 7 C 1.52998 * 109.46929 * 180.02562 * 6 5 4 8 8 H 1.08998 * 109.47163 * 60.00140 * 7 6 5 9 9 O 1.42898 * 109.47144 * 300.00282 * 7 6 5 10 10 C 1.52994 * 109.46905 * 180.02562 * 7 6 5 11 11 N 1.46900 * 109.47098 * 185.00021 * 10 7 6 12 12 C 1.46900 * 110.99939 * 66.04332 * 11 10 7 13 13 C 1.46897 * 111.00194 * 189.99707 * 11 10 7 14 14 C 1.50699 * 109.47356 * 169.99847 * 13 11 10 15 15 H 1.08000 * 120.00198 * 0.02562 * 14 13 11 16 16 C 1.37879 * 120.00231 * 180.02562 * 14 13 11 17 17 N 1.31516 * 120.00008 * 359.97438 * 16 14 13 18 18 Si 1.86796 * 120.00039 * 180.02562 * 16 14 13 19 19 H 1.48504 * 109.47308 * 89.99809 * 18 16 14 20 20 H 1.48502 * 109.47435 * 209.99699 * 18 16 14 21 21 H 1.48502 * 109.47471 * 329.99897 * 18 16 14 22 22 O 1.42903 * 109.47180 * 119.99474 * 2 1 3 23 23 C 1.35950 * 116.99933 * 275.15776 * 22 2 1 24 24 C 1.38711 * 120.02975 * 185.76002 * 23 22 2 25 25 C 1.38147 * 119.96565 * 180.29301 * 24 23 22 26 26 C 1.38454 * 120.03424 * 359.44540 * 25 24 23 27 27 F 1.35099 * 119.97241 * 180.27788 * 26 25 24 28 28 C 1.38457 * 120.05687 * 0.25561 * 26 25 24 29 29 C 1.38146 * 120.03254 * 0.02562 * 28 26 25 30 30 H 1.08999 * 109.47277 * 180.02562 * 1 2 3 31 31 H 1.08996 * 109.47561 * 300.00450 * 1 2 3 32 32 H 1.08999 * 109.46933 * 60.00904 * 1 2 3 33 33 H 1.08999 * 109.47013 * 300.00474 * 4 2 1 34 34 H 1.09004 * 109.46591 * 60.00212 * 4 2 1 35 35 H 1.00893 * 111.00528 * 303.95658 * 5 4 2 36 36 H 1.08997 * 109.47242 * 300.00354 * 6 5 4 37 37 H 1.09004 * 109.46707 * 60.00550 * 6 5 4 38 38 H 0.96701 * 113.99958 * 299.99887 * 9 7 6 39 39 H 1.09000 * 109.47059 * 304.99756 * 10 7 6 40 40 H 1.09005 * 109.47757 * 65.00003 * 10 7 6 41 41 H 1.09005 * 109.47386 * 60.00327 * 12 11 10 42 42 H 1.09001 * 109.47213 * 179.97438 * 12 11 10 43 43 H 1.08991 * 109.47532 * 299.99963 * 12 11 10 44 44 H 1.09004 * 109.47773 * 289.99965 * 13 11 10 45 45 H 1.09004 * 109.47105 * 50.00238 * 13 11 10 46 46 H 0.96996 * 120.00045 * 180.02562 * 17 16 14 47 47 H 1.07996 * 120.01700 * 0.02562 * 24 23 22 48 48 H 1.08009 * 119.98419 * 179.72855 * 25 24 23 49 49 H 1.08008 * 119.98438 * 180.02562 * 28 26 25 50 50 H 1.07997 * 120.01945 * 180.02562 * 29 28 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 6 2.0401 -0.7214 -1.2491 5 7 3.5091 -0.7208 -1.2493 6 6 4.0356 -1.4072 -2.4366 7 6 5.5650 -1.3868 -2.4012 8 1 5.9145 -1.8953 -1.5027 9 8 6.0232 -0.0333 -2.3911 10 6 6.1134 -2.1011 -3.6381 11 7 7.5769 -2.1869 -3.5454 12 6 7.9839 -3.0542 -2.4317 13 6 8.1585 -2.6495 -4.8125 14 6 9.6565 -2.4924 -4.7648 15 1 10.1294 -2.0896 -3.8813 16 6 10.4235 -2.8628 -5.8490 17 7 9.8478 -3.3538 -6.9247 18 14 12.2804 -2.6687 -5.7895 19 1 12.8908 -3.9097 -5.2484 20 1 12.7964 -2.4201 -7.1596 21 1 12.6305 -1.5221 -4.9131 22 8 2.0063 -0.6735 1.1669 23 6 2.1094 0.0623 2.3054 24 6 2.6761 -0.4942 3.4426 25 6 2.7746 0.2527 4.6006 26 6 2.3186 1.5598 4.6230 27 9 2.4207 2.2909 5.7545 28 6 1.7584 2.1185 3.4868 29 6 1.6533 1.3720 2.3291 30 1 -0.3634 -1.0276 0.0005 31 1 -0.3634 0.5139 0.8899 32 1 -0.3633 0.5137 -0.8901 33 1 1.6768 -1.7491 -1.2490 34 1 1.6768 -0.2076 -2.1392 35 1 3.8704 0.2190 -1.1846 36 1 3.6865 -2.4398 -2.4441 37 1 3.6858 -0.8988 -3.3351 38 1 5.7488 0.4806 -3.1629 39 1 5.6933 -3.1054 -3.6937 40 1 5.8382 -1.5421 -4.5325 41 1 7.5842 -4.0564 -2.5867 42 1 9.0720 -3.1005 -2.3861 43 1 7.5976 -2.6497 -1.4962 44 1 7.9080 -3.6993 -4.9656 45 1 7.7571 -2.0566 -5.6344 46 1 10.3874 -3.6148 -7.6873 47 1 3.0361 -1.5122 3.4241 48 1 3.2118 -0.1817 5.4875 49 1 1.4034 3.1384 3.5055 50 1 1.2167 1.8081 1.4428 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000574192068.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:13:17 Heat of formation + Delta-G solvation = -102.062841 kcal Electronic energy + Delta-G solvation = -28866.970595 eV Core-core repulsion = 24616.122255 eV Total energy + Delta-G solvation = -4250.848341 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 340.195 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -49.09098 -40.61606 -38.48648 -37.80704 -36.02944 -35.05611 -32.64860 -32.47872 -31.43163 -29.73703 -29.52824 -27.25447 -26.58532 -24.93788 -23.93217 -23.16076 -22.74465 -21.53108 -21.01678 -20.16288 -18.82439 -17.74282 -17.09074 -16.55799 -16.20046 -16.00008 -15.96419 -15.68737 -15.30229 -15.15835 -14.85062 -14.55603 -14.37240 -14.22024 -14.06315 -13.78774 -13.61575 -13.44018 -13.27122 -13.01192 -12.71385 -12.56739 -12.43888 -12.31317 -12.00607 -11.87495 -11.49950 -11.33198 -11.11880 -11.08593 -10.96439 -10.86445 -10.74564 -10.69002 -10.27699 -10.01795 -9.61954 -9.54538 -9.11371 -8.59643 -8.43210 -8.38175 -7.18724 -6.02184 -4.02992 0.79770 0.89997 2.80124 3.24298 3.32867 3.38814 3.44195 3.73082 3.99186 4.26015 4.36297 4.41291 4.43298 4.55277 4.62288 4.70356 4.76880 4.85657 4.94414 5.04795 5.06945 5.15432 5.18653 5.29949 5.35000 5.36499 5.44784 5.49790 5.53308 5.63759 5.65671 5.73369 5.76143 5.82203 5.90369 6.06381 6.21525 6.34072 6.36841 6.41835 6.75004 6.80044 7.08195 7.20872 7.27523 7.33447 7.81136 7.94530 8.10520 8.21405 8.56365 9.05142 9.61162 11.08775 Molecular weight = 340.19amu Principal moments of inertia in cm(-1) A = 0.016600 B = 0.001762 C = 0.001645 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1686.360507 B =15889.965685 C =17013.253861 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.085 3.915 3 H 0.073 0.927 4 C 0.062 3.938 5 N -0.678 5.678 6 C 0.029 3.971 7 C 0.114 3.886 8 H 0.105 0.895 9 O -0.546 6.546 10 C 0.025 3.975 11 N -0.530 5.530 12 C 0.036 3.964 13 C 0.192 3.808 14 C -0.505 4.505 15 H 0.064 0.936 16 C 0.053 3.947 17 N -0.901 5.901 18 Si 0.899 3.101 19 H -0.281 1.281 20 H -0.287 1.287 21 H -0.272 1.272 22 O -0.287 6.287 23 C 0.133 3.867 24 C -0.123 4.123 25 C -0.112 4.112 26 C 0.052 3.948 27 F -0.144 7.144 28 C -0.112 4.112 29 C -0.188 4.188 30 H 0.071 0.929 31 H 0.066 0.934 32 H 0.073 0.927 33 H 0.083 0.917 34 H 0.049 0.951 35 H 0.347 0.653 36 H 0.079 0.921 37 H 0.032 0.968 38 H 0.365 0.635 39 H 0.029 0.971 40 H 0.068 0.932 41 H 0.009 0.991 42 H 0.074 0.926 43 H 0.048 0.952 44 H -0.011 1.011 45 H 0.028 0.972 46 H 0.261 0.739 47 H 0.142 0.858 48 H 0.141 0.859 49 H 0.135 0.865 50 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -23.253 8.526 17.642 30.408 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.239 4.239 2 C 0.028 3.972 3 H 0.091 0.909 4 C -0.068 4.068 5 N -0.310 5.310 6 C -0.101 4.101 7 C 0.054 3.946 8 H 0.123 0.877 9 O -0.349 6.349 10 C -0.104 4.104 11 N -0.254 5.254 12 C -0.113 4.113 13 C 0.067 3.933 14 C -0.543 4.543 15 H 0.082 0.918 16 C -0.148 4.148 17 N -0.540 5.540 18 Si 0.726 3.274 19 H -0.208 1.208 20 H -0.213 1.213 21 H -0.197 1.197 22 O -0.200 6.200 23 C 0.086 3.914 24 C -0.142 4.142 25 C -0.130 4.130 26 C 0.033 3.967 27 F -0.123 7.123 28 C -0.131 4.131 29 C -0.207 4.207 30 H 0.090 0.910 31 H 0.085 0.915 32 H 0.092 0.908 33 H 0.102 0.898 34 H 0.067 0.933 35 H 0.166 0.834 36 H 0.098 0.902 37 H 0.050 0.950 38 H 0.211 0.789 39 H 0.047 0.953 40 H 0.086 0.914 41 H 0.027 0.973 42 H 0.093 0.907 43 H 0.067 0.933 44 H 0.007 0.993 45 H 0.046 0.954 46 H 0.070 0.930 47 H 0.160 0.840 48 H 0.159 0.841 49 H 0.153 0.847 50 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -22.655 7.999 18.505 30.327 hybrid contribution 0.100 0.300 -1.476 1.509 sum -22.555 8.299 17.030 29.456 Atomic orbital electron populations 1.22373 0.94641 1.03816 1.03089 1.22510 0.93875 0.96626 0.84187 0.90875 1.22076 0.89184 1.01665 0.93825 1.60269 1.05652 1.23974 1.41115 1.22693 0.96956 0.99916 0.90567 1.22000 0.89613 0.83543 0.99431 0.87743 1.86624 1.78848 1.22396 1.47063 1.22709 0.91561 0.98677 0.97499 1.62028 1.04972 1.51510 1.06906 1.22263 1.02271 0.93184 0.93574 1.19743 0.95069 0.93431 0.85015 1.21176 0.91109 1.41135 1.00906 0.91775 1.25003 0.98966 0.95416 0.95388 1.69960 1.35570 1.43625 1.04892 0.86485 0.85184 0.78490 0.77198 1.20752 1.21295 1.19714 1.86257 1.80512 1.37329 1.15855 1.19060 0.94708 0.90227 0.87366 1.20330 1.02012 1.01575 0.90294 1.20980 1.00361 0.92559 0.99137 1.17572 1.05095 0.90765 0.83316 1.91486 1.94579 1.77059 1.49127 1.20920 0.99818 1.00748 0.91642 1.21161 1.06012 0.94171 0.99315 0.91026 0.91545 0.90789 0.89822 0.93267 0.83412 0.90231 0.95025 0.78884 0.95322 0.91353 0.97298 0.90695 0.93329 0.99306 0.95433 0.92982 0.84019 0.84133 0.84679 0.84502 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.97 9.17 37.16 0.34 -0.63 16 2 C 0.08 0.61 2.43 -26.73 -0.07 0.54 16 3 H 0.07 0.48 6.32 -51.93 -0.33 0.15 16 4 C 0.06 0.48 5.38 -3.82 -0.02 0.46 16 5 N -0.68 -6.91 6.37 -113.77 -0.72 -7.64 16 6 C 0.03 0.31 5.39 -3.82 -0.02 0.29 16 7 C 0.11 1.61 3.19 -26.74 -0.09 1.53 16 8 H 0.10 1.64 6.34 -51.93 -0.33 1.31 16 9 O -0.55 -8.09 12.62 -35.23 -0.44 -8.54 16 10 C 0.03 0.43 4.59 -3.83 -0.02 0.42 16 11 N -0.53 -11.54 4.70 -244.37 -1.15 -12.69 16 12 C 0.04 0.72 9.14 60.06 0.55 1.26 16 13 C 0.19 5.06 4.72 -4.98 -0.02 5.03 16 14 C -0.50 -14.37 8.46 -34.44 -0.29 -14.66 16 15 H 0.06 1.82 7.12 -52.49 -0.37 1.45 16 16 C 0.05 1.52 5.46 -17.82 -0.10 1.43 16 17 N -0.90 -26.89 13.29 55.43 0.74 -26.15 16 18 Si 0.90 21.87 29.54 -169.99 -5.02 16.85 16 19 H -0.28 -6.74 7.11 56.52 0.40 -6.34 16 20 H -0.29 -6.91 7.11 56.52 0.40 -6.51 16 21 H -0.27 -6.55 7.11 56.52 0.40 -6.15 16 22 O -0.29 -2.78 9.67 -19.58 -0.19 -2.97 16 23 C 0.13 1.22 6.60 -39.23 -0.26 0.96 16 24 C -0.12 -1.09 9.99 -39.44 -0.39 -1.49 16 25 C -0.11 -0.93 10.02 -39.54 -0.40 -1.33 16 26 C 0.05 0.47 7.30 -39.42 -0.29 0.19 16 27 F -0.14 -1.43 17.27 2.25 0.04 -1.40 16 28 C -0.11 -0.90 10.02 -39.53 -0.40 -1.29 16 29 C -0.19 -1.47 8.24 -39.44 -0.32 -1.80 16 30 H 0.07 0.41 8.14 -51.93 -0.42 -0.02 16 31 H 0.07 0.35 6.90 -51.93 -0.36 -0.01 16 32 H 0.07 0.29 8.14 -51.93 -0.42 -0.13 16 33 H 0.08 0.69 8.14 -51.93 -0.42 0.27 16 34 H 0.05 0.32 8.14 -51.93 -0.42 -0.11 16 35 H 0.35 3.54 8.12 -39.30 -0.32 3.22 16 36 H 0.08 0.87 8.14 -51.93 -0.42 0.44 16 37 H 0.03 0.31 8.14 -51.93 -0.42 -0.11 16 38 H 0.37 4.28 9.04 45.56 0.41 4.69 16 39 H 0.03 0.48 8.12 -51.93 -0.42 0.06 16 40 H 0.07 1.15 7.93 -51.93 -0.41 0.73 16 41 H 0.01 0.17 8.14 -51.93 -0.42 -0.25 16 42 H 0.07 1.62 6.76 -51.93 -0.35 1.27 16 43 H 0.05 0.86 6.37 -51.93 -0.33 0.53 16 44 H -0.01 -0.30 8.12 -51.93 -0.42 -0.73 16 45 H 0.03 0.77 7.93 -51.93 -0.41 0.35 16 46 H 0.26 7.35 8.31 -40.82 -0.34 7.01 16 47 H 0.14 1.12 8.06 -52.49 -0.42 0.70 16 48 H 0.14 0.90 8.06 -52.48 -0.42 0.48 16 49 H 0.14 0.82 8.06 -52.48 -0.42 0.40 16 50 H 0.14 0.81 5.42 -52.49 -0.28 0.52 16 LS Contribution 408.84 15.07 6.16 6.16 Total: -1.00 -32.55 408.84 -9.67 -42.22 By element: Atomic # 1 Polarization: 10.53 SS G_CDS: -7.29 Total: 3.24 kcal Atomic # 6 Polarization: -7.29 SS G_CDS: -1.79 Total: -9.08 kcal Atomic # 7 Polarization: -45.34 SS G_CDS: -1.14 Total: -46.48 kcal Atomic # 8 Polarization: -10.88 SS G_CDS: -0.63 Total: -11.51 kcal Atomic # 9 Polarization: -1.43 SS G_CDS: 0.04 Total: -1.40 kcal Atomic # 14 Polarization: 21.87 SS G_CDS: -5.02 Total: 16.85 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -32.55 -9.67 -42.22 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000574192068.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.843 kcal (2) G-P(sol) polarization free energy of solvation -32.547 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.390 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.673 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.220 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.063 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds