Wall clock time and date at job start Sat Apr 11 2020 06:13:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.43198 * 179.97438 * 2 1 4 4 C 1.39594 * 120.10973 * 339.97943 * 3 2 1 5 5 C 1.38511 * 119.78873 * 180.27111 * 4 3 2 6 6 N 1.40003 * 120.00157 * 179.72913 * 5 4 3 7 7 C 1.34777 * 120.00126 * 34.71520 * 6 5 4 8 8 O 1.21285 * 119.99886 * 355.51066 * 7 6 5 9 9 C 1.50699 * 119.99821 * 175.22891 * 7 6 5 10 10 S 1.81001 * 109.47169 * 180.27930 * 9 7 6 11 11 C 1.76194 * 100.00193 * 180.02562 * 10 9 7 12 12 H 1.08000 * 120.00371 * 359.97438 * 11 10 9 13 13 C 1.38804 * 119.99970 * 180.02562 * 11 10 9 14 14 N 1.31627 * 119.99931 * 359.97438 * 13 11 10 15 15 Si 1.86802 * 120.00013 * 179.97438 * 13 11 10 16 16 H 1.48500 * 109.46823 * 59.99680 * 15 13 11 17 17 H 1.48499 * 109.47052 * 179.97438 * 15 13 11 18 18 H 1.48499 * 109.46872 * 299.99924 * 15 13 11 19 19 C 1.39126 * 120.00006 * 359.45656 * 5 4 3 20 20 Cl 1.73599 * 119.89590 * 180.27511 * 19 5 4 21 21 C 1.38339 * 120.21231 * 0.29134 * 19 5 4 22 22 N 1.48016 * 119.89486 * 179.97438 * 21 19 5 23 23 O 1.21796 * 119.99926 * 180.02562 * 22 21 19 24 24 O 1.21793 * 120.00004 * 0.02562 * 22 21 19 25 25 C 1.37980 * 120.21387 * 359.97438 * 21 19 5 26 26 H 1.07998 * 120.10732 * 0.02562 * 4 3 2 27 27 H 0.97007 * 119.99989 * 214.72401 * 6 5 4 28 28 H 1.08997 * 109.47347 * 300.27943 * 9 7 6 29 29 H 1.09006 * 109.47440 * 60.28204 * 9 7 6 30 30 H 0.96999 * 119.99948 * 180.02562 * 14 13 11 31 31 H 1.07998 * 120.00291 * 179.97438 * 25 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2688 -1.1337 0.4134 5 6 4.6538 -1.1238 0.4161 6 7 5.3612 -2.2570 0.8353 7 6 4.8765 -3.4877 0.5767 8 8 3.7894 -3.6139 0.0538 9 6 5.6881 -4.7069 0.9315 10 16 4.7774 -6.1972 0.4561 11 6 5.9229 -7.4330 0.9709 12 1 6.8592 -7.1456 1.4260 13 6 5.6224 -8.7761 0.7907 14 7 4.4815 -9.1265 0.2356 15 14 6.8372 -10.0864 1.3358 16 1 7.0740 -9.9646 2.7967 17 1 6.2831 -11.4309 1.0350 18 1 8.1197 -9.9051 0.6096 19 6 5.3422 0.0102 -0.0031 20 17 7.0782 0.0171 -0.0054 21 6 4.6478 1.1325 -0.4178 22 7 5.3873 2.3354 -0.8618 23 8 4.7778 3.3246 -1.2269 24 8 6.6052 2.3358 -0.8622 25 6 3.2680 1.1342 -0.4188 26 1 2.7327 -2.0147 0.7339 27 1 6.2000 -2.1563 1.3119 28 1 6.6393 -4.6775 0.4003 29 1 5.8722 -4.7209 2.0058 30 1 4.2713 -10.0651 0.1100 31 1 2.7293 2.0124 -0.7429 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000764303668.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:13:20 Heat of formation + Delta-G solvation = 30.321803 kcal Electronic energy + Delta-G solvation = -23061.711322 eV Core-core repulsion = 19078.934568 eV Total energy + Delta-G solvation = -3982.776755 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 341.007 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -42.60919 -41.16636 -39.27485 -37.63598 -36.89443 -36.76176 -35.32110 -32.63005 -32.58555 -31.44006 -29.02934 -27.13667 -25.66672 -24.86671 -23.58821 -21.37244 -20.35228 -19.15398 -18.46096 -17.96368 -17.90895 -17.58135 -17.01145 -16.95423 -16.42819 -15.31020 -14.94092 -14.80869 -14.38992 -14.18302 -13.90721 -13.80532 -13.65374 -13.19770 -12.94788 -12.76663 -12.55278 -12.50677 -12.14208 -11.79499 -11.43276 -11.23630 -11.21474 -11.14679 -10.92982 -10.87296 -10.16198 -10.01074 -9.89826 -9.21113 -9.04075 -8.50202 -6.72114 -6.37442 -4.11105 -0.79736 -0.25688 0.72470 0.76752 1.18059 1.91440 2.03413 2.33633 2.50787 2.98346 3.03376 3.09810 3.13955 3.19678 3.29039 3.72184 3.91599 4.03036 4.04969 4.17279 4.50467 4.71680 4.93497 4.98718 5.11256 5.27888 5.40685 5.53269 5.80784 5.87485 5.95356 6.81703 6.89421 7.25003 7.44431 7.81263 8.19116 9.08323 10.69846 Molecular weight = 341.01amu Principal moments of inertia in cm(-1) A = 0.016658 B = 0.002724 C = 0.002374 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1680.477828 B =10276.963012 C =11794.034391 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.378 5.378 2 C 0.251 3.749 3 C 0.008 3.992 4 C -0.020 4.020 5 C 0.177 3.823 6 N -0.674 5.674 7 C 0.539 3.461 8 O -0.489 6.489 9 C -0.155 4.155 10 S -0.052 6.052 11 C -0.540 4.540 12 H 0.075 0.925 13 C 0.076 3.924 14 N -0.866 5.866 15 Si 0.920 3.080 16 H -0.273 1.273 17 H -0.282 1.282 18 H -0.273 1.273 19 C -0.003 4.003 20 Cl 0.012 6.988 21 C -0.022 4.022 22 N 0.029 4.971 23 O -0.155 6.155 24 O -0.129 6.129 25 C -0.021 4.021 26 H 0.181 0.819 27 H 0.421 0.579 28 H 0.101 0.899 29 H 0.100 0.900 30 H 0.271 0.729 31 H 0.172 0.828 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.206 20.464 1.898 20.800 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.053 5.053 2 C -0.065 4.065 3 C 0.003 3.997 4 C -0.043 4.043 5 C 0.078 3.922 6 N -0.322 5.322 7 C 0.327 3.673 8 O -0.360 6.360 9 C -0.305 4.305 10 S 0.174 5.826 11 C -0.688 4.688 12 H 0.093 0.907 13 C -0.134 4.134 14 N -0.501 5.501 15 Si 0.746 3.254 16 H -0.198 1.198 17 H -0.207 1.207 18 H -0.198 1.198 19 C -0.036 4.036 20 Cl 0.042 6.958 21 C -0.106 4.106 22 N 0.551 4.449 23 O -0.369 6.369 24 O -0.350 6.350 25 C -0.044 4.044 26 H 0.198 0.802 27 H 0.259 0.741 28 H 0.119 0.881 29 H 0.118 0.882 30 H 0.081 0.919 31 H 0.190 0.810 Dipole moment (debyes) X Y Z Total from point charges -0.673 19.401 1.183 19.449 hybrid contribution 3.280 -0.390 1.014 3.456 sum 2.607 19.011 2.197 19.314 Atomic orbital electron populations 1.81330 1.11329 1.05920 1.06679 1.24927 0.91733 0.94944 0.94937 1.15459 0.85659 0.94039 1.04534 1.21918 0.91991 0.98104 0.92280 1.17003 0.90586 0.86517 0.98051 1.43870 1.26695 1.03393 1.58229 1.20800 0.86761 0.83030 0.76673 1.90722 1.20371 1.85313 1.39608 1.23577 1.03662 0.97681 1.05627 1.85446 1.25411 0.91377 1.80383 1.22787 1.06022 0.92477 1.47524 0.90691 1.25000 0.95940 0.97934 0.94555 1.69984 1.21827 1.18110 1.40189 0.86193 0.80402 0.79590 0.79175 1.19837 1.20734 1.19814 1.20718 0.88855 0.93763 1.00233 1.98490 1.03379 1.98212 1.95750 1.20209 0.91798 0.87222 1.11401 1.43243 1.01355 1.01501 0.98781 1.94572 1.70137 1.22769 1.49411 1.94646 0.94547 1.88885 1.56931 1.20875 0.90366 0.99110 0.94036 0.80161 0.74100 0.88108 0.88152 0.91917 0.81016 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 27. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.38 -4.55 18.54 41.84 0.78 -3.77 16 2 C 0.25 2.42 15.33 -22.47 -0.34 2.07 16 3 C 0.01 0.06 5.73 -106.93 -0.61 -0.55 16 4 C -0.02 -0.18 8.40 -38.97 -0.33 -0.51 16 5 C 0.18 1.64 6.30 -83.69 -0.53 1.12 16 6 N -0.67 -6.58 5.04 -9.87 -0.05 -6.63 16 7 C 0.54 7.62 7.69 -10.99 -0.08 7.54 16 8 O -0.49 -8.45 13.28 5.55 0.07 -8.37 16 9 C -0.16 -2.53 6.16 36.01 0.22 -2.31 16 10 S -0.05 -1.26 20.57 -107.50 -2.21 -3.47 16 11 C -0.54 -14.12 9.50 30.94 0.29 -13.83 16 12 H 0.07 1.84 7.80 -52.49 -0.41 1.43 16 13 C 0.08 2.02 5.49 -17.43 -0.10 1.93 16 14 N -0.87 -24.66 13.22 55.49 0.73 -23.93 16 15 Si 0.92 20.16 29.55 -169.99 -5.02 15.14 16 16 H -0.27 -5.83 7.11 56.52 0.40 -5.43 16 17 H -0.28 -6.13 7.11 56.52 0.40 -5.73 16 18 H -0.27 -5.84 7.11 56.52 0.40 -5.44 16 19 C 0.00 -0.03 6.34 -39.21 -0.25 -0.28 16 20 Cl 0.01 0.10 24.89 -51.86 -1.29 -1.19 16 21 C -0.02 -0.19 6.84 -80.01 -0.55 -0.74 16 22 N 0.03 0.30 4.45 33.93 0.15 0.45 16 23 O -0.16 -1.67 18.43 -29.46 -0.54 -2.22 16 24 O -0.13 -1.46 15.99 -29.46 -0.47 -1.93 16 25 C -0.02 -0.15 9.25 -39.14 -0.36 -0.51 16 26 H 0.18 1.92 6.19 -52.49 -0.33 1.59 16 27 H 0.42 2.99 8.07 -40.82 -0.33 2.66 16 28 H 0.10 1.50 8.14 -51.92 -0.42 1.08 16 29 H 0.10 1.45 8.14 -51.91 -0.42 1.03 16 30 H 0.27 7.22 8.31 -40.82 -0.34 6.88 16 31 H 0.17 0.90 7.60 -52.49 -0.40 0.50 16 LS Contribution 326.59 15.07 4.92 4.92 Total: -1.00 -31.48 326.59 -7.01 -38.49 By element: Atomic # 1 Polarization: 0.01 SS G_CDS: -1.44 Total: -1.43 kcal Atomic # 6 Polarization: -3.44 SS G_CDS: -2.64 Total: -6.07 kcal Atomic # 7 Polarization: -35.49 SS G_CDS: 1.61 Total: -33.88 kcal Atomic # 8 Polarization: -11.57 SS G_CDS: -0.94 Total: -12.52 kcal Atomic # 14 Polarization: 20.16 SS G_CDS: -5.02 Total: 15.14 kcal Atomic # 16 Polarization: -1.26 SS G_CDS: -2.21 Total: -3.47 kcal Atomic # 17 Polarization: 0.10 SS G_CDS: -1.29 Total: -1.19 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -31.48 -7.01 -38.49 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000764303668.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.812 kcal (2) G-P(sol) polarization free energy of solvation -31.479 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.334 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.012 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.490 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.322 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds