Wall clock time and date at job start Sat Apr 11 2020 06:15:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34240 * 116.99758 * 2 1 4 4 O 1.20828 * 120.00103 * 0.02562 * 3 2 1 5 5 C 1.50700 * 119.99789 * 179.97438 * 3 2 1 6 6 N 1.46498 * 109.46744 * 180.02562 * 5 3 2 7 7 C 1.36938 * 119.99827 * 265.12812 * 6 5 3 8 8 H 1.07999 * 120.00148 * 199.39592 * 7 6 5 9 9 C 1.38817 * 119.99921 * 19.39570 * 7 6 5 10 10 N 1.31617 * 119.99981 * 18.64651 * 9 7 6 11 11 Si 1.86805 * 119.99960 * 198.63994 * 9 7 6 12 12 H 1.48495 * 109.46909 * 90.00190 * 11 9 7 13 13 H 1.48497 * 109.46738 * 210.00305 * 11 9 7 14 14 H 1.48505 * 109.47002 * 330.00081 * 11 9 7 15 15 C 1.46493 * 120.00194 * 85.13226 * 6 5 3 16 16 C 1.50700 * 109.46997 * 275.13342 * 15 6 5 17 17 C 1.37903 * 119.92917 * 102.10074 * 16 15 6 18 18 C 1.39651 * 119.85619 * 179.75406 * 17 16 15 19 19 C 1.47659 * 120.13231 * 180.24379 * 18 17 16 20 20 O 1.21485 * 120.00247 * 0.26989 * 19 18 17 21 21 O 1.34723 * 120.00127 * 180.26998 * 19 18 17 22 22 C 1.45200 * 117.00001 * 179.97438 * 21 19 18 23 23 C 1.39686 * 119.73392 * 0.51436 * 18 17 16 24 24 C 1.37864 * 119.85771 * 359.72914 * 23 18 17 25 25 C 1.38500 * 119.93392 * 282.36789 * 16 15 6 26 26 Cl 1.73603 * 119.86077 * 0.02562 * 25 16 15 27 27 H 1.09001 * 109.47229 * 299.99713 * 1 2 3 28 28 H 1.09002 * 109.47064 * 59.99820 * 1 2 3 29 29 H 1.08998 * 109.46885 * 179.97438 * 1 2 3 30 30 H 1.08996 * 109.47160 * 60.00317 * 5 3 2 31 31 H 1.08996 * 109.47124 * 299.99820 * 5 3 2 32 32 H 0.96999 * 119.99787 * 179.97438 * 10 9 7 33 33 H 1.08993 * 109.47706 * 35.13395 * 15 6 5 34 34 H 1.09003 * 109.47534 * 155.13847 * 15 6 5 35 35 H 1.07998 * 120.07220 * 359.97438 * 17 16 15 36 36 H 1.09006 * 109.46956 * 179.97438 * 22 21 19 37 37 H 1.08999 * 109.47416 * 300.00372 * 22 21 19 38 38 H 1.08998 * 109.46957 * 60.00723 * 22 21 19 39 39 H 1.08001 * 120.07492 * 179.70845 * 23 18 17 40 40 H 1.07996 * 119.93219 * 179.97438 * 24 23 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5663 1.2750 0.0006 6 7 3.9816 2.6799 0.0011 7 6 4.2727 3.3082 -1.1803 8 1 4.8648 4.2114 -1.1800 9 6 3.8068 2.7841 -2.3783 10 7 2.8078 1.9271 -2.3775 11 14 4.5975 3.2953 -3.9917 12 1 5.7159 2.3716 -4.3094 13 1 3.5863 3.2403 -5.0778 14 1 5.1188 4.6806 -3.8704 15 6 4.0855 3.4126 1.2654 16 6 2.7326 3.9594 1.6417 17 6 1.9799 3.3276 2.6091 18 6 0.7286 3.8387 2.9603 19 6 -0.0801 3.1701 3.9992 20 8 0.3448 2.1763 4.5538 21 8 -1.2893 3.6622 4.3321 22 6 -2.0289 2.9534 5.3611 23 6 0.2427 4.9815 2.3209 24 6 1.0025 5.6012 1.3517 25 6 2.2454 5.0923 1.0113 26 17 3.1957 5.8776 -0.2110 27 1 -0.3634 0.5138 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 3.9564 0.7808 -0.8891 31 1 3.9557 0.7811 0.8908 32 1 2.4820 1.5613 -3.2147 33 1 4.4357 2.7394 2.0478 34 1 4.7911 4.2355 1.1515 35 1 2.3588 2.4416 3.0967 36 1 -2.9823 3.4533 5.5328 37 1 -2.2089 1.9280 5.0382 38 1 -1.4508 2.9473 6.2851 39 1 -0.7263 5.3787 2.5848 40 1 0.6279 6.4846 0.8562 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000181966589.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:15:10 Heat of formation + Delta-G solvation = -111.809821 kcal Electronic energy + Delta-G solvation = -28979.669871 eV Core-core repulsion = 24787.350394 eV Total energy + Delta-G solvation = -4192.319477 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 341.091 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -40.36913 -39.04537 -38.47916 -36.33840 -35.93559 -35.63979 -34.47382 -32.26164 -30.73927 -30.42652 -28.19150 -27.64305 -26.07588 -25.65181 -23.72620 -22.48203 -21.33161 -20.33231 -19.60676 -17.47340 -17.01254 -16.91133 -16.26006 -16.15830 -15.99107 -15.53999 -15.13279 -14.92885 -14.67455 -14.23146 -13.80227 -13.49601 -13.38614 -13.16491 -13.06008 -12.48079 -12.29713 -12.19969 -12.08081 -11.77369 -11.46841 -11.28718 -11.01081 -10.97910 -10.83685 -10.79415 -10.72029 -10.47971 -10.40404 -10.34276 -10.03735 -9.72648 -9.54805 -9.05532 -8.57695 -8.41610 -8.08652 -7.07265 -5.93060 -3.26747 1.00448 1.77088 2.73174 2.76393 2.90700 3.33733 3.40924 3.42204 3.94218 4.07151 4.12175 4.47909 4.89379 5.03717 5.11449 5.14149 5.21083 5.34268 5.38569 5.43482 5.60998 5.76100 5.83450 5.90520 5.93325 6.10574 6.12098 6.26978 6.32112 6.32369 6.46727 6.52967 6.60272 6.74594 6.90346 6.99710 7.14926 7.70272 7.83641 7.87305 8.14725 8.98935 9.44314 9.66748 10.08102 11.17292 Molecular weight = 341.09amu Principal moments of inertia in cm(-1) A = 0.013628 B = 0.005059 C = 0.004163 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2054.114544 B = 5533.115962 C = 6724.350582 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.047 3.953 2 O -0.385 6.385 3 C 0.461 3.539 4 O -0.489 6.489 5 C 0.189 3.811 6 N -0.551 5.551 7 C -0.242 4.242 8 H 0.084 0.916 9 C 0.007 3.993 10 N -0.898 5.898 11 Si 0.906 3.094 12 H -0.286 1.286 13 H -0.293 1.293 14 H -0.279 1.279 15 C 0.170 3.830 16 C -0.075 4.075 17 C -0.034 4.034 18 C -0.134 4.134 19 C 0.513 3.487 20 O -0.512 6.512 21 O -0.357 6.357 22 C 0.037 3.963 23 C -0.067 4.067 24 C -0.131 4.131 25 C 0.038 3.962 26 Cl -0.048 7.048 27 H 0.042 0.958 28 H 0.051 0.949 29 H 0.077 0.923 30 H 0.111 0.889 31 H 0.051 0.949 32 H 0.257 0.743 33 H 0.055 0.945 34 H 0.074 0.926 35 H 0.129 0.871 36 H 0.099 0.901 37 H 0.062 0.938 38 H 0.061 0.939 39 H 0.132 0.868 40 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.766 2.680 10.837 12.138 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.048 4.048 2 O -0.303 6.303 3 C 0.300 3.700 4 O -0.373 6.373 5 C 0.060 3.940 6 N -0.268 5.268 7 C -0.371 4.371 8 H 0.102 0.898 9 C -0.192 4.192 10 N -0.543 5.543 11 Si 0.736 3.264 12 H -0.213 1.213 13 H -0.219 1.219 14 H -0.205 1.205 15 C 0.044 3.956 16 C -0.080 4.080 17 C -0.054 4.054 18 C -0.135 4.135 19 C 0.360 3.640 20 O -0.402 6.402 21 O -0.274 6.274 22 C -0.057 4.057 23 C -0.086 4.086 24 C -0.150 4.150 25 C 0.010 3.990 26 Cl -0.018 7.018 27 H 0.061 0.939 28 H 0.070 0.930 29 H 0.096 0.904 30 H 0.129 0.871 31 H 0.069 0.931 32 H 0.067 0.933 33 H 0.073 0.927 34 H 0.092 0.908 35 H 0.147 0.853 36 H 0.118 0.882 37 H 0.080 0.920 38 H 0.080 0.920 39 H 0.150 0.850 40 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -4.830 2.690 10.722 12.063 hybrid contribution -0.576 0.181 -1.198 1.342 sum -5.406 2.872 9.524 11.321 Atomic orbital electron populations 1.22779 0.79967 1.01036 1.01005 1.86527 1.20801 1.36974 1.85955 1.25290 0.93399 0.80366 0.70956 1.90500 1.66325 1.35949 1.44502 1.20296 0.85894 0.86351 1.01441 1.44368 1.74091 1.06212 1.02180 1.19345 1.25573 1.09754 0.82417 0.89804 1.24868 0.96302 0.99901 0.98102 1.69758 1.24290 1.34189 1.26020 0.86220 0.78503 0.78291 0.83380 1.21337 1.21934 1.20479 1.20244 0.90384 0.95909 0.89096 1.20773 1.01313 0.92471 0.93408 1.20866 0.91645 0.97895 0.94995 1.18903 0.95800 0.99130 0.99682 1.21360 0.79564 0.81972 0.81147 1.90806 1.71289 1.25329 1.52727 1.86559 1.30667 1.55345 1.54846 1.23224 0.95476 0.97460 0.89511 1.21053 0.98983 0.93895 0.94642 1.20866 0.93496 1.01517 0.99110 1.20943 0.92644 0.94219 0.91237 1.98380 1.71299 1.79249 1.52921 0.93938 0.92992 0.90413 0.87075 0.93086 0.93290 0.92704 0.90780 0.85312 0.88240 0.91968 0.92004 0.84981 0.85332 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 20. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.88 10.56 101.05 1.07 1.95 16 2 O -0.38 -8.44 10.57 -39.28 -0.42 -8.86 16 3 C 0.46 10.83 5.91 36.01 0.21 11.05 16 4 O -0.49 -12.45 12.76 -18.75 -0.24 -12.69 16 5 C 0.19 4.20 5.54 -5.19 -0.03 4.17 16 6 N -0.55 -12.35 2.18 -175.99 -0.38 -12.73 16 7 C -0.24 -5.90 7.67 -15.06 -0.12 -6.02 16 8 H 0.08 2.03 6.81 -52.49 -0.36 1.67 16 9 C 0.01 0.18 4.93 -17.43 -0.09 0.09 16 10 N -0.90 -24.34 8.98 55.49 0.50 -23.84 16 11 Si 0.91 21.00 29.59 -169.99 -5.03 15.97 16 12 H -0.29 -6.59 7.11 56.52 0.40 -6.18 16 13 H -0.29 -7.05 7.11 56.52 0.40 -6.65 16 14 H -0.28 -6.40 7.11 56.52 0.40 -6.00 16 15 C 0.17 3.24 5.40 -5.20 -0.03 3.22 16 16 C -0.08 -1.45 3.58 -104.65 -0.37 -1.82 16 17 C -0.03 -0.64 8.18 -39.18 -0.32 -0.96 16 18 C -0.13 -2.34 5.87 -104.98 -0.62 -2.96 16 19 C 0.51 8.63 7.90 34.58 0.27 8.91 16 20 O -0.51 -9.53 16.14 -19.25 -0.31 -9.84 16 21 O -0.36 -5.04 9.82 -40.56 -0.40 -5.44 16 22 C 0.04 0.38 10.56 101.05 1.07 1.45 16 23 C -0.07 -1.07 9.62 -39.18 -0.38 -1.45 16 24 C -0.13 -2.23 9.81 -39.61 -0.39 -2.62 16 25 C 0.04 0.72 6.29 -39.37 -0.25 0.47 16 26 Cl -0.05 -0.93 24.51 -51.86 -1.27 -2.20 16 27 H 0.04 0.79 8.13 -51.93 -0.42 0.36 16 28 H 0.05 1.03 8.13 -51.93 -0.42 0.60 16 29 H 0.08 1.16 8.14 -51.93 -0.42 0.73 16 30 H 0.11 2.66 6.56 -51.93 -0.34 2.32 16 31 H 0.05 0.98 8.00 -51.93 -0.42 0.56 16 32 H 0.26 6.99 8.31 -40.82 -0.34 6.65 16 33 H 0.05 0.92 7.84 -51.93 -0.41 0.51 16 34 H 0.07 1.36 7.27 -51.93 -0.38 0.98 16 35 H 0.13 2.34 7.61 -52.49 -0.40 1.94 16 36 H 0.10 0.68 8.14 -51.93 -0.42 0.26 16 37 H 0.06 0.64 8.14 -51.93 -0.42 0.22 16 38 H 0.06 0.60 8.14 -51.93 -0.42 0.17 16 39 H 0.13 1.78 7.61 -52.49 -0.40 1.39 16 40 H 0.13 1.90 8.06 -52.49 -0.42 1.48 16 LS Contribution 354.57 15.07 5.34 5.34 Total: -1.00 -30.84 354.57 -6.96 -37.80 By element: Atomic # 1 Polarization: 5.81 SS G_CDS: -4.79 Total: 1.02 kcal Atomic # 6 Polarization: 15.43 SS G_CDS: 0.04 Total: 15.47 kcal Atomic # 7 Polarization: -36.68 SS G_CDS: 0.11 Total: -36.57 kcal Atomic # 8 Polarization: -35.46 SS G_CDS: -1.36 Total: -36.83 kcal Atomic # 14 Polarization: 21.00 SS G_CDS: -5.03 Total: 15.97 kcal Atomic # 17 Polarization: -0.93 SS G_CDS: -1.27 Total: -2.20 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -30.84 -6.96 -37.80 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000181966589.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.011 kcal (2) G-P(sol) polarization free energy of solvation -30.839 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.850 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.960 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.799 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.810 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds