Wall clock time and date at job start Sat Apr 11 2020 06:16:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35657 * 116.99930 * 2 1 4 4 C 1.38646 * 120.14320 * 0.02562 * 3 2 1 5 5 C 1.38201 * 120.07218 * 179.97438 * 4 3 2 6 6 Cl 1.73598 * 119.81832 * 179.97438 * 5 4 3 7 7 C 1.38700 * 120.36347 * 359.97438 * 5 4 3 8 8 C 1.37728 * 120.28454 * 359.73741 * 7 5 4 9 9 C 1.39744 * 119.92367 * 0.53633 * 8 7 5 10 10 C 1.47474 * 120.18357 * 179.74313 * 9 8 7 11 11 O 1.21593 * 120.00199 * 179.72391 * 10 9 8 12 12 N 1.34777 * 119.99537 * 359.72080 * 10 9 8 13 13 N 1.40109 * 119.99659 * 179.72165 * 12 10 9 14 14 C 1.34774 * 119.99481 * 180.27982 * 13 12 10 15 15 O 1.21593 * 119.99194 * 180.02562 * 14 13 12 16 16 N 1.34774 * 120.00548 * 0.02562 * 14 13 12 17 17 C 1.46499 * 119.99899 * 180.02562 * 16 14 13 18 18 C 1.53001 * 109.47073 * 179.97438 * 17 16 14 19 19 C 1.50699 * 109.47500 * 179.97438 * 18 17 16 20 20 H 1.08005 * 119.99776 * 0.02562 * 19 18 17 21 21 C 1.37875 * 120.00239 * 180.02562 * 19 18 17 22 22 N 1.31514 * 120.00041 * 179.97438 * 21 19 18 23 23 Si 1.86803 * 119.99847 * 359.97438 * 21 19 18 24 24 H 1.48500 * 109.46986 * 90.00259 * 23 21 19 25 25 H 1.48501 * 109.46810 * 209.99644 * 23 21 19 26 26 H 1.48492 * 109.47096 * 329.99997 * 23 21 19 27 27 H 1.09001 * 109.47002 * 300.00067 * 1 2 3 28 28 H 1.08996 * 109.46805 * 59.99851 * 1 2 3 29 29 H 1.08997 * 109.46920 * 179.97438 * 1 2 3 30 30 H 1.07997 * 119.96145 * 359.97438 * 4 3 2 31 31 H 1.07999 * 119.85751 * 180.02562 * 7 5 4 32 32 H 1.08001 * 120.03826 * 180.28131 * 8 7 5 33 33 H 0.97001 * 120.00485 * 0.02562 * 12 10 9 34 34 H 0.97000 * 119.99800 * 0.27836 * 13 12 10 35 35 H 0.96996 * 120.00143 * 0.02562 * 16 14 13 36 36 H 1.08998 * 109.47134 * 299.99549 * 17 16 14 37 37 H 1.08994 * 109.47397 * 59.99841 * 17 16 14 38 38 H 1.09005 * 109.47338 * 300.00205 * 18 17 16 39 39 H 1.09007 * 109.46922 * 59.99533 * 18 17 16 40 40 H 0.97001 * 120.00302 * 180.02562 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2927 2.3734 0.0005 5 6 1.9216 3.6040 0.0011 6 17 0.9733 5.0581 0.0011 7 6 3.3063 3.6837 0.0016 8 6 4.0681 2.5362 0.0071 9 6 3.4446 1.2856 0.0008 10 6 4.2547 0.0532 0.0008 11 8 3.7088 -1.0332 0.0004 12 7 5.6002 0.1314 0.0013 13 7 6.3698 -1.0394 0.0073 14 6 7.7153 -0.9611 0.0135 15 8 8.3832 -1.9772 0.0182 16 7 8.3204 0.2431 0.0144 17 6 9.7829 0.3280 0.0206 18 6 10.2085 1.7976 0.0198 19 6 11.7130 1.8850 0.0268 20 1 12.3063 0.9825 0.0309 21 6 12.3320 3.1169 0.0279 22 7 13.6449 3.1932 0.0345 23 14 11.3058 4.6778 0.0200 24 1 11.0268 5.0938 1.4180 25 1 12.0507 5.7564 -0.6780 26 1 10.0244 4.4242 -0.6861 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 0.2141 2.3188 0.0005 31 1 3.7893 4.6496 0.0024 32 1 5.1460 2.6029 0.0121 33 1 6.0357 0.9981 0.0020 34 1 5.9343 -1.9061 0.0070 35 1 7.7876 1.0536 0.0111 36 1 10.1716 -0.1627 0.9129 37 1 10.1793 -0.1652 -0.8669 38 1 9.8199 2.2880 -0.8728 39 1 9.8121 2.2911 0.9072 40 1 14.0805 4.0599 0.0356 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000273561238.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:16:03 Heat of formation + Delta-G solvation = -39.693846 kcal Electronic energy + Delta-G solvation = -26268.177780 eV Core-core repulsion = 22111.278237 eV Total energy + Delta-G solvation = -4156.899543 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 341.097 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -41.24389 -40.20559 -38.98385 -38.20326 -36.86135 -35.74864 -35.16580 -32.83016 -32.45089 -30.87850 -30.58224 -29.79715 -27.78491 -25.04903 -24.53727 -22.91762 -21.65105 -21.34580 -20.73939 -19.44150 -18.60962 -18.04813 -16.97233 -16.89737 -16.54202 -16.40756 -15.77847 -15.76046 -15.46193 -15.05021 -14.92751 -14.48399 -14.26002 -14.12893 -13.88609 -13.88024 -13.55238 -13.12209 -12.66389 -12.52786 -12.40327 -11.97069 -11.60552 -11.56490 -11.53314 -11.39398 -11.21749 -10.65088 -10.48317 -10.31279 -10.08826 -9.94946 -9.60820 -9.39374 -8.95142 -8.84724 -8.66100 -8.31641 -6.15351 -4.16076 0.06150 0.67625 1.43175 1.66553 2.27249 2.65100 3.11165 3.16668 3.20362 3.26258 3.29371 3.30721 3.93464 4.01568 4.31988 4.32514 4.40044 4.61078 4.66826 4.72029 4.82855 4.90103 5.05862 5.17099 5.24403 5.46632 5.52672 5.83990 5.86775 6.14264 6.26075 6.47871 6.56502 6.60923 6.72447 7.07982 7.15118 7.16274 7.59128 7.62899 8.17201 8.39635 8.58804 8.89160 9.43996 10.97638 Molecular weight = 341.10amu Principal moments of inertia in cm(-1) A = 0.010387 B = 0.002752 C = 0.002180 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2694.997514 B =10173.539616 C =12842.777853 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.274 6.274 3 C 0.204 3.796 4 C -0.213 4.213 5 C 0.033 3.967 6 Cl -0.055 7.055 7 C -0.153 4.153 8 C -0.033 4.033 9 C -0.162 4.162 10 C 0.564 3.436 11 O -0.512 6.512 12 N -0.526 5.526 13 N -0.535 5.535 14 C 0.709 3.291 15 O -0.571 6.571 16 N -0.739 5.739 17 C 0.145 3.855 18 C -0.022 4.022 19 C -0.524 4.524 20 H 0.077 0.923 21 C 0.069 3.931 22 N -0.897 5.897 23 Si 0.882 3.118 24 H -0.276 1.276 25 H -0.287 1.287 26 H -0.266 1.266 27 H 0.059 0.941 28 H 0.059 0.941 29 H 0.107 0.893 30 H 0.148 0.852 31 H 0.147 0.853 32 H 0.145 0.855 33 H 0.418 0.582 34 H 0.440 0.560 35 H 0.385 0.615 36 H 0.065 0.935 37 H 0.065 0.935 38 H 0.022 0.978 39 H 0.018 0.982 40 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -31.315 2.702 -0.107 31.431 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.184 6.184 3 C 0.155 3.845 4 C -0.233 4.233 5 C 0.006 3.994 6 Cl -0.026 7.026 7 C -0.172 4.172 8 C -0.053 4.053 9 C -0.167 4.167 10 C 0.351 3.649 11 O -0.386 6.386 12 N -0.278 5.278 13 N -0.293 5.293 14 C 0.408 3.592 15 O -0.444 6.444 16 N -0.394 5.394 17 C 0.022 3.978 18 C -0.060 4.060 19 C -0.562 4.562 20 H 0.095 0.905 21 C -0.133 4.133 22 N -0.535 5.535 23 Si 0.710 3.290 24 H -0.202 1.202 25 H -0.213 1.213 26 H -0.191 1.191 27 H 0.078 0.922 28 H 0.078 0.922 29 H 0.125 0.875 30 H 0.166 0.834 31 H 0.165 0.835 32 H 0.162 0.838 33 H 0.261 0.739 34 H 0.286 0.714 35 H 0.218 0.782 36 H 0.084 0.916 37 H 0.084 0.916 38 H 0.040 0.960 39 H 0.036 0.964 40 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -30.879 1.306 -0.108 30.906 hybrid contribution -0.976 1.839 0.014 2.082 sum -31.855 3.145 -0.094 32.010 Atomic orbital electron populations 1.23268 0.78059 1.04898 1.01534 1.86417 1.21323 1.24525 1.86144 1.18748 0.90446 0.84774 0.90570 1.21084 1.01188 0.90174 1.10806 1.20901 0.92085 0.87599 0.98833 1.98410 1.72169 1.35662 1.96365 1.20938 0.91299 1.00005 1.04973 1.21164 1.00285 0.90077 0.93724 1.19082 0.90636 0.93211 1.13814 1.17832 0.79946 0.89421 0.77694 1.90871 1.70706 1.28230 1.48765 1.44721 1.03799 1.02048 1.77241 1.44670 1.01368 1.01042 1.82230 1.15829 0.79667 0.85240 0.78452 1.91028 1.60194 1.34512 1.58679 1.45585 1.09821 1.05308 1.78727 1.21510 0.74203 1.00008 1.02054 1.19811 0.98478 0.90856 0.96820 1.20885 0.88772 0.94699 1.51843 0.90505 1.25005 0.94845 0.99075 0.94367 1.69898 1.08244 1.25164 1.50179 0.86750 0.80682 0.83140 0.78467 1.20206 1.21265 1.19108 0.92213 0.92220 0.87469 0.83439 0.83538 0.83783 0.73947 0.71438 0.78192 0.91635 0.91619 0.95960 0.96402 0.92491 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.09 9.81 101.05 0.99 1.08 16 2 O -0.27 -2.68 8.57 -40.56 -0.35 -3.03 16 3 C 0.20 1.84 6.70 -38.70 -0.26 1.58 16 4 C -0.21 -1.48 8.80 -39.44 -0.35 -1.83 16 5 C 0.03 0.23 6.32 -39.42 -0.25 -0.02 16 6 Cl -0.06 -0.36 28.94 -51.86 -1.50 -1.86 16 7 C -0.15 -0.99 9.80 -39.60 -0.39 -1.38 16 8 C -0.03 -0.23 9.53 -39.21 -0.37 -0.60 16 9 C -0.16 -1.50 5.89 -104.84 -0.62 -2.11 16 10 C 0.56 6.52 7.88 -12.50 -0.10 6.42 16 11 O -0.51 -7.56 15.00 -16.61 -0.25 -7.81 16 12 N -0.53 -5.57 6.21 30.44 0.19 -5.38 16 13 N -0.53 -7.11 6.26 27.63 0.17 -6.94 16 14 C 0.71 11.57 8.68 -86.92 -0.75 10.81 16 15 O -0.57 -11.62 17.18 5.28 0.09 -11.53 16 16 N -0.74 -11.37 5.52 -65.23 -0.36 -11.73 16 17 C 0.14 2.78 5.61 -4.04 -0.02 2.76 16 18 C -0.02 -0.47 4.16 -27.88 -0.12 -0.58 16 19 C -0.52 -14.11 9.66 -34.44 -0.33 -14.44 16 20 H 0.08 2.26 7.99 -52.48 -0.42 1.84 16 21 C 0.07 1.92 5.47 -17.82 -0.10 1.82 16 22 N -0.90 -26.64 13.96 55.43 0.77 -25.87 16 23 Si 0.88 20.06 27.47 -169.99 -4.67 15.39 16 24 H -0.28 -6.16 7.11 56.52 0.40 -5.76 16 25 H -0.29 -6.57 7.11 56.52 0.40 -6.17 16 26 H -0.27 -5.58 6.54 56.52 0.37 -5.21 16 27 H 0.06 0.22 7.66 -51.93 -0.40 -0.18 16 28 H 0.06 0.22 7.66 -51.93 -0.40 -0.18 16 29 H 0.11 0.43 8.14 -51.93 -0.42 0.01 16 30 H 0.15 0.72 6.30 -52.49 -0.33 0.39 16 31 H 0.15 0.71 8.06 -52.49 -0.42 0.29 16 32 H 0.14 0.61 6.40 -52.49 -0.34 0.28 16 33 H 0.42 3.35 4.73 -182.59 -0.86 2.48 16 34 H 0.44 5.89 8.10 -182.59 -1.48 4.42 16 35 H 0.38 4.62 6.39 -40.82 -0.26 4.36 16 36 H 0.07 1.34 8.14 -51.93 -0.42 0.91 16 37 H 0.07 1.34 8.14 -51.93 -0.42 0.92 16 38 H 0.02 0.46 7.20 -51.93 -0.37 0.09 16 39 H 0.02 0.36 7.57 -51.92 -0.39 -0.03 16 40 H 0.27 7.35 8.31 -40.82 -0.34 7.01 16 LS Contribution 358.96 15.07 5.41 5.41 Total: -1.00 -35.09 358.96 -9.26 -44.35 By element: Atomic # 1 Polarization: 11.58 SS G_CDS: -6.11 Total: 5.47 kcal Atomic # 6 Polarization: 6.18 SS G_CDS: -2.66 Total: 3.52 kcal Atomic # 7 Polarization: -50.68 SS G_CDS: 0.78 Total: -49.91 kcal Atomic # 8 Polarization: -21.87 SS G_CDS: -0.51 Total: -22.37 kcal Atomic # 14 Polarization: 20.06 SS G_CDS: -4.67 Total: 15.39 kcal Atomic # 17 Polarization: -0.36 SS G_CDS: -1.50 Total: -1.86 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -35.09 -9.26 -44.35 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000273561238.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.658 kcal (2) G-P(sol) polarization free energy of solvation -35.087 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.429 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.265 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.351 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.694 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds