Wall clock time and date at job start Sat Apr 11 2020 06:16:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35743 * 117.00242 * 2 1 4 4 C 1.39310 * 120.16323 * 90.00087 * 3 2 1 5 5 N 1.40179 * 120.01396 * 359.97438 * 4 3 2 6 6 C 1.34773 * 119.99867 * 214.94144 * 5 4 3 7 7 O 1.21594 * 120.00255 * 355.46270 * 6 5 4 8 8 N 1.34778 * 120.00162 * 175.19337 * 6 5 4 9 9 C 1.46507 * 119.99441 * 0.27543 * 8 6 5 10 10 C 1.46496 * 120.00365 * 180.27059 * 8 6 5 11 11 C 1.50699 * 109.47212 * 90.00040 * 10 8 6 12 12 H 1.08001 * 119.99551 * 359.97438 * 11 10 8 13 13 C 1.37873 * 120.00156 * 179.97438 * 11 10 8 14 14 N 1.31516 * 119.99810 * 0.02562 * 13 11 10 15 15 Si 1.86804 * 120.00098 * 179.97438 * 13 11 10 16 16 H 1.48501 * 109.46663 * 90.00277 * 15 13 11 17 17 H 1.48499 * 109.47250 * 210.00334 * 15 13 11 18 18 H 1.48496 * 109.46910 * 330.00395 * 15 13 11 19 19 C 1.38572 * 119.97312 * 180.25665 * 4 3 2 20 20 C 1.38599 * 120.30862 * 359.43924 * 19 4 3 21 21 Cl 1.73603 * 119.83257 * 180.27689 * 20 19 4 22 22 C 1.37871 * 120.33372 * 0.56517 * 20 19 4 23 23 C 1.39819 * 120.01961 * 359.71436 * 22 20 19 24 24 C 1.47543 * 120.15457 * 180.02562 * 23 22 20 25 25 N 1.34777 * 120.00270 * 359.97438 * 24 23 22 26 26 O 1.21593 * 119.99750 * 179.97438 * 24 23 22 27 27 H 1.08993 * 109.47031 * 179.97438 * 1 2 3 28 28 H 1.09002 * 109.46808 * 300.00133 * 1 2 3 29 29 H 1.09000 * 109.46773 * 59.99615 * 1 2 3 30 30 H 0.97000 * 119.99820 * 34.93532 * 5 4 3 31 31 H 1.08994 * 109.47560 * 90.00153 * 9 8 6 32 32 H 1.08999 * 109.46542 * 210.00070 * 9 8 6 33 33 H 1.09005 * 109.46879 * 329.99214 * 9 8 6 34 34 H 1.09000 * 109.46823 * 210.00100 * 10 8 6 35 35 H 1.08996 * 109.47052 * 329.99801 * 10 8 6 36 36 H 0.96998 * 119.99498 * 179.97438 * 14 13 11 37 37 H 1.08005 * 119.84267 * 179.70326 * 19 4 3 38 38 H 1.08006 * 119.99212 * 179.74506 * 22 20 19 39 39 H 0.97006 * 119.99608 * 0.02562 * 25 24 23 40 40 H 0.96994 * 120.00519 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0453 1.2095 0.0000 4 6 2.3632 1.8331 1.2045 5 7 2.0462 1.2122 2.4206 6 6 1.6754 1.9570 3.4809 7 8 1.6951 3.1706 3.4082 8 7 1.2775 1.3566 4.6201 9 6 1.2539 -0.1056 4.7077 10 6 0.8688 2.1661 5.7707 11 6 -0.6116 2.4371 5.6937 12 1 -1.1900 2.0459 4.8698 13 6 -1.2275 3.1846 6.6750 14 7 -0.5230 3.6614 7.6779 15 14 -3.0625 3.5211 6.5791 16 1 -3.8009 2.4430 7.2846 17 1 -3.3604 4.8268 7.2207 18 1 -3.4847 3.5610 5.1560 19 6 2.9875 3.0702 1.1999 20 6 3.3089 3.6870 0.0010 21 17 4.0975 5.2336 0.0098 22 6 3.0002 3.0813 -1.1984 23 6 2.3650 1.8358 -1.2100 24 6 2.0338 1.1846 -2.4918 25 7 2.3430 1.7906 -3.6553 26 8 1.4818 0.1012 -2.4985 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 2.0936 0.2466 2.4990 31 1 2.2174 -0.4635 5.0706 32 1 0.4683 -0.4156 5.3968 33 1 1.0583 -0.5256 3.7211 34 1 1.0922 1.6274 6.6915 35 1 1.4122 3.1109 5.7615 36 1 -0.9563 4.1875 8.3680 37 1 3.2287 3.5540 2.1349 38 1 3.2495 3.5688 -2.1293 39 1 2.7837 2.6548 -3.6498 40 1 2.1256 1.3624 -4.4980 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000286338195.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:16:28 Heat of formation + Delta-G solvation = -64.643894 kcal Electronic energy + Delta-G solvation = -27682.884858 eV Core-core repulsion = 23524.903400 eV Total energy + Delta-G solvation = -4157.981458 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 341.097 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -41.05324 -39.75023 -38.50199 -37.67323 -36.34931 -35.14414 -34.52514 -33.80085 -32.59659 -30.62172 -29.63215 -27.74767 -26.86751 -25.88493 -24.56034 -23.28969 -22.08469 -21.13402 -19.53865 -18.76982 -17.96504 -17.49909 -16.94675 -16.59765 -16.38548 -15.91452 -15.69239 -15.50315 -14.90385 -14.73947 -14.68933 -14.29554 -13.99089 -13.92475 -13.40831 -13.14344 -12.96046 -12.77942 -12.43745 -12.23433 -11.95466 -11.74620 -11.42895 -11.25982 -11.16969 -10.95611 -10.63026 -10.41439 -10.32400 -10.19557 -10.02442 -9.90168 -9.68604 -9.41953 -8.83338 -8.47717 -8.23565 -7.72557 -6.08770 -4.13649 0.50263 0.84359 1.93541 2.59426 2.89535 3.23525 3.26796 3.27553 3.34607 3.39163 3.64683 3.88223 4.29999 4.44243 4.46930 4.67315 4.94690 5.00194 5.25341 5.29298 5.35580 5.39631 5.46429 5.52950 5.70769 5.79242 5.86732 5.88730 6.08467 6.20759 6.49605 6.64089 6.70574 7.02908 7.25498 7.36228 7.39616 7.54672 7.88060 8.00659 8.16881 8.42169 8.85629 9.07183 9.51691 10.99206 Molecular weight = 341.10amu Principal moments of inertia in cm(-1) A = 0.012185 B = 0.003420 C = 0.003049 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2297.328419 B = 8184.361065 C = 9180.577686 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.047 3.953 2 O -0.316 6.316 3 C 0.125 3.875 4 C 0.173 3.827 5 N -0.688 5.688 6 C 0.697 3.303 7 O -0.566 6.566 8 N -0.607 5.607 9 C 0.080 3.920 10 C 0.259 3.741 11 C -0.528 4.528 12 H 0.057 0.943 13 C 0.062 3.938 14 N -0.894 5.894 15 Si 0.898 3.102 16 H -0.280 1.280 17 H -0.285 1.285 18 H -0.275 1.275 19 C -0.077 4.077 20 C -0.027 4.027 21 Cl -0.058 7.058 22 C -0.093 4.093 23 C -0.137 4.137 24 C 0.568 3.432 25 N -0.853 5.853 26 O -0.519 6.519 27 H 0.095 0.905 28 H 0.045 0.955 29 H 0.048 0.952 30 H 0.410 0.590 31 H 0.048 0.952 32 H 0.081 0.919 33 H 0.052 0.948 34 H 0.036 0.964 35 H 0.047 0.953 36 H 0.264 0.736 37 H 0.167 0.833 38 H 0.138 0.862 39 H 0.400 0.600 40 H 0.405 0.595 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.577 -4.791 -19.527 21.859 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.047 4.047 2 O -0.232 6.232 3 C 0.077 3.923 4 C 0.074 3.926 5 N -0.338 5.338 6 C 0.398 3.602 7 O -0.443 6.443 8 N -0.342 5.342 9 C -0.064 4.064 10 C 0.140 3.860 11 C -0.567 4.567 12 H 0.075 0.925 13 C -0.140 4.140 14 N -0.533 5.533 15 Si 0.726 3.274 16 H -0.206 1.206 17 H -0.210 1.210 18 H -0.199 1.199 19 C -0.099 4.099 20 C -0.055 4.055 21 Cl -0.029 7.029 22 C -0.114 4.114 23 C -0.142 4.142 24 C 0.354 3.646 25 N -0.418 5.418 26 O -0.394 6.394 27 H 0.114 0.886 28 H 0.064 0.936 29 H 0.067 0.933 30 H 0.248 0.752 31 H 0.066 0.934 32 H 0.099 0.901 33 H 0.071 0.929 34 H 0.054 0.946 35 H 0.065 0.935 36 H 0.074 0.926 37 H 0.184 0.816 38 H 0.156 0.844 39 H 0.230 0.770 40 H 0.236 0.764 Dipole moment (debyes) X Y Z Total from point charges 8.290 -4.574 -19.038 21.262 hybrid contribution -1.016 0.318 -0.268 1.098 sum 7.273 -4.256 -19.306 21.065 Atomic orbital electron populations 1.22919 0.77781 1.03406 1.00565 1.85948 1.20505 1.22802 1.93938 1.18395 0.96805 0.87514 0.89615 1.17583 0.96998 0.93231 0.84759 1.42917 1.71347 1.10732 1.08836 1.15932 0.78733 0.85352 0.80145 1.90895 1.60285 1.11472 1.81627 1.47521 1.66615 1.06400 1.13629 1.21654 1.01908 0.81308 1.01543 1.19294 0.95376 0.90890 0.80401 1.21424 0.93335 1.33464 1.08507 0.92499 1.24918 0.98534 0.95344 0.95200 1.69926 1.35905 1.35566 1.11872 0.86495 0.84989 0.77710 0.78222 1.20617 1.21028 1.19946 1.21483 0.94932 0.94386 0.99072 1.20529 1.01461 0.89374 0.94113 1.98382 1.78581 1.27081 1.98904 1.20906 0.99341 0.93834 0.97273 1.19822 1.05736 0.95515 0.93096 1.17871 0.78306 0.84718 0.83711 1.43743 1.64730 1.25111 1.08227 1.90868 1.41084 1.20150 1.87341 0.88622 0.93604 0.93326 0.75163 0.93371 0.90062 0.92916 0.94597 0.93538 0.92642 0.81575 0.84403 0.77029 0.76392 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.61 10.49 101.05 1.06 1.67 16 2 O -0.32 -4.54 8.39 -40.85 -0.34 -4.89 16 3 C 0.13 1.79 5.75 -38.54 -0.22 1.57 16 4 C 0.17 2.66 6.32 -83.52 -0.53 2.13 16 5 N -0.69 -10.99 5.03 -14.13 -0.07 -11.06 16 6 C 0.70 14.18 8.12 -86.92 -0.71 13.47 16 7 O -0.57 -13.61 13.33 5.28 0.07 -13.54 16 8 N -0.61 -12.41 2.86 -188.74 -0.54 -12.95 16 9 C 0.08 1.20 10.17 59.85 0.61 1.81 16 10 C 0.26 6.56 5.16 -5.20 -0.03 6.54 16 11 C -0.53 -14.66 9.39 -34.44 -0.32 -14.98 16 12 H 0.06 1.59 7.81 -52.49 -0.41 1.18 16 13 C 0.06 1.75 5.46 -17.82 -0.10 1.65 16 14 N -0.89 -26.08 13.29 55.43 0.74 -25.34 16 15 Si 0.90 21.62 29.54 -169.99 -5.02 16.60 16 16 H -0.28 -6.54 7.11 56.52 0.40 -6.13 16 17 H -0.28 -6.80 7.11 56.52 0.40 -6.40 16 18 H -0.27 -6.63 7.11 56.52 0.40 -6.22 16 19 C -0.08 -1.18 8.47 -39.32 -0.33 -1.51 16 20 C -0.03 -0.34 6.31 -39.58 -0.25 -0.59 16 21 Cl -0.06 -0.68 28.94 -51.86 -1.50 -2.18 16 22 C -0.09 -0.96 9.31 -39.12 -0.36 -1.33 16 23 C -0.14 -1.67 5.88 -104.87 -0.62 -2.29 16 24 C 0.57 6.57 8.04 -12.47 -0.10 6.47 16 25 N -0.85 -5.78 8.82 30.46 0.27 -5.51 16 26 O -0.52 -7.73 14.84 -16.63 -0.25 -7.97 16 27 H 0.10 1.03 8.14 -51.93 -0.42 0.61 16 28 H 0.05 0.62 8.14 -51.93 -0.42 0.19 16 29 H 0.05 0.63 7.50 -51.93 -0.39 0.24 16 30 H 0.41 5.54 6.36 -40.82 -0.26 5.28 16 31 H 0.05 0.62 8.14 -51.93 -0.42 0.19 16 32 H 0.08 1.25 8.07 -51.93 -0.42 0.83 16 33 H 0.05 0.65 6.43 -51.93 -0.33 0.32 16 34 H 0.04 0.91 8.07 -51.93 -0.42 0.49 16 35 H 0.05 1.32 7.42 -51.93 -0.39 0.94 16 36 H 0.26 7.28 8.31 -40.82 -0.34 6.94 16 37 H 0.17 2.91 6.17 -52.48 -0.32 2.58 16 38 H 0.14 0.91 6.40 -52.48 -0.34 0.58 16 39 H 0.40 1.66 6.86 -40.82 -0.28 1.38 16 40 H 0.40 2.12 8.93 -40.82 -0.36 1.76 16 LS Contribution 357.98 15.07 5.39 5.39 Total: -1.00 -34.63 357.98 -7.47 -42.11 By element: Atomic # 1 Polarization: 9.07 SS G_CDS: -4.32 Total: 4.75 kcal Atomic # 6 Polarization: 16.50 SS G_CDS: -1.90 Total: 14.60 kcal Atomic # 7 Polarization: -55.26 SS G_CDS: 0.39 Total: -54.87 kcal Atomic # 8 Polarization: -25.88 SS G_CDS: -0.52 Total: -26.40 kcal Atomic # 14 Polarization: 21.62 SS G_CDS: -5.02 Total: 16.60 kcal Atomic # 17 Polarization: -0.68 SS G_CDS: -1.50 Total: -2.18 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -34.63 -7.47 -42.11 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000286338195.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.536 kcal (2) G-P(sol) polarization free energy of solvation -34.633 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.170 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.474 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.108 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.644 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds