Wall clock time and date at job start Sat Apr 11 2020 06:14:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.08998 * 109.47533 * 2 1 4 4 O 1.45206 * 109.47147 * 240.00299 * 2 1 3 5 5 C 1.34740 * 116.99951 * 89.99965 * 4 2 1 6 6 O 1.21475 * 119.99502 * 359.97438 * 5 4 2 7 7 C 1.47698 * 119.99929 * 180.02562 * 5 4 2 8 8 C 1.39525 * 119.63279 * 179.72124 * 7 5 4 9 9 C 1.38274 * 119.18083 * 179.78752 * 8 7 5 10 10 C 1.39375 * 118.44923 * 0.48588 * 9 8 7 11 11 N 1.39074 * 120.40281 * 179.72415 * 10 9 8 12 12 C 1.39663 * 119.19667 * 359.73746 * 10 9 8 13 13 Cl 1.73595 * 119.62509 * 180.02562 * 12 10 9 14 14 N 1.31371 * 120.74739 * 0.02632 * 12 10 9 15 15 C 1.50697 * 109.47466 * 120.00144 * 2 1 3 16 16 O 1.21285 * 120.00040 * 114.99997 * 15 2 1 17 17 N 1.34778 * 119.99902 * 295.00139 * 15 2 1 18 18 C 1.46493 * 120.00087 * 359.97438 * 17 15 2 19 19 C 1.46505 * 119.99823 * 179.97438 * 17 15 2 20 20 C 1.50697 * 109.46900 * 89.99912 * 19 17 15 21 21 H 1.07995 * 120.00161 * 0.02562 * 20 19 17 22 22 C 1.37880 * 120.00017 * 179.97438 * 20 19 17 23 23 N 1.31522 * 119.99535 * 0.02562 * 22 20 19 24 24 Si 1.86799 * 120.00201 * 180.02562 * 22 20 19 25 25 H 1.48509 * 109.46712 * 60.00253 * 24 22 20 26 26 H 1.48495 * 109.47092 * 179.97438 * 24 22 20 27 27 H 1.48497 * 109.47224 * 300.00309 * 24 22 20 28 28 H 1.09002 * 109.47153 * 299.99629 * 1 2 3 29 29 H 1.09001 * 109.46832 * 179.97438 * 1 2 3 30 30 H 1.09004 * 109.47261 * 59.99801 * 1 2 3 31 31 H 1.08000 * 120.41451 * 0.03073 * 8 7 5 32 32 H 1.07998 * 120.77037 * 180.22355 * 9 8 7 33 33 H 0.96997 * 120.00397 * 180.02562 * 11 10 9 34 34 H 0.97000 * 119.99976 * 0.02562 * 11 10 9 35 35 H 1.09002 * 109.47115 * 89.99747 * 18 17 15 36 36 H 1.08998 * 109.47192 * 209.99907 * 18 17 15 37 37 H 1.08999 * 109.47064 * 329.99847 * 18 17 15 38 38 H 1.08997 * 109.46961 * 210.00478 * 19 17 15 39 39 H 1.09005 * 109.46984 * 329.99937 * 19 17 15 40 40 H 0.97003 * 119.99529 * 179.97438 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 8 2.0140 -0.6844 -1.1856 5 6 2.2179 0.0670 -2.2853 6 8 1.9969 1.2610 -2.2545 7 6 2.7090 -0.5614 -3.5285 8 6 2.9119 0.2229 -4.6644 9 6 3.3762 -0.3743 -5.8219 10 6 3.6149 -1.7474 -5.8109 11 7 4.0767 -2.3907 -6.9541 12 6 3.3845 -2.4696 -4.6378 13 17 3.6788 -4.1802 -4.6115 14 7 2.9475 -1.8690 -3.5542 15 6 2.0324 -0.7104 1.2304 16 8 2.6531 -1.7467 1.1214 17 7 1.7920 -0.1942 2.4520 18 6 1.0427 1.0577 2.5836 19 6 2.2799 -0.8852 3.6481 20 6 3.6615 -0.3879 3.9870 21 1 4.1292 0.3676 3.3730 22 6 4.3282 -0.8966 5.0814 23 7 3.7584 -1.8162 5.8294 24 14 6.0405 -0.2797 5.5019 25 1 5.9905 1.1820 5.7598 26 1 6.5346 -0.9792 6.7150 27 1 6.9572 -0.5507 4.3655 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3634 0.5139 -0.8900 31 1 2.7127 1.2841 -4.6389 32 1 3.5457 0.2090 -6.7149 33 1 4.2406 -3.3466 -6.9401 34 1 4.2349 -1.8834 -7.7656 35 1 -0.0214 0.8372 2.6678 36 1 1.3755 1.5882 3.4758 37 1 1.2166 1.6793 1.7053 38 1 1.6073 -0.6862 4.4824 39 1 2.3162 -1.9580 3.4586 40 1 4.2276 -2.1744 6.5991 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000772077647.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:14:45 Heat of formation + Delta-G solvation = -76.478566 kcal Electronic energy + Delta-G solvation = -26810.496652 eV Core-core repulsion = 22652.002004 eV Total energy + Delta-G solvation = -4158.494648 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 341.097 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -41.08963 -40.12158 -38.78148 -36.94275 -36.33100 -35.84823 -34.83361 -32.83282 -32.44975 -31.55759 -29.87782 -27.64863 -26.11323 -25.19176 -24.33334 -23.87720 -22.48906 -21.15323 -18.87037 -18.78390 -17.96361 -17.66154 -16.93903 -16.47627 -16.28121 -16.05203 -15.79109 -15.22840 -15.10809 -14.96058 -14.51159 -14.15044 -13.90840 -13.47780 -13.41482 -13.04231 -12.78677 -12.31598 -12.16399 -12.12416 -12.05534 -11.83359 -11.61101 -11.58150 -11.32873 -11.14473 -10.91147 -10.87025 -10.62241 -10.50523 -10.12698 -10.03431 -10.01514 -9.61714 -8.81141 -8.39957 -8.33113 -7.65714 -6.01222 -4.05914 0.27553 0.69859 1.49019 2.24050 2.44502 3.01963 3.33700 3.35818 3.39468 3.41614 3.44785 3.82221 4.01101 4.20933 4.47606 4.52731 4.57697 4.82876 4.92245 5.06077 5.16314 5.22699 5.33265 5.41557 5.61559 5.71246 5.72816 5.78647 5.91524 6.06870 6.27412 6.41179 6.50521 6.92205 7.03751 7.21437 7.45392 7.52947 7.77764 7.95141 8.25447 8.36351 8.91232 9.06804 9.58865 11.06917 Molecular weight = 341.10amu Principal moments of inertia in cm(-1) A = 0.013220 B = 0.002717 C = 0.002489 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2117.503996 B =10303.677519 C =11246.412425 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C 0.067 3.933 3 H 0.106 0.894 4 O -0.300 6.300 5 C 0.529 3.471 6 O -0.507 6.507 7 C 0.046 3.954 8 C -0.045 4.045 9 C -0.163 4.163 10 C 0.220 3.780 11 N -0.849 5.849 12 C 0.098 3.902 13 Cl -0.024 7.024 14 N -0.375 5.375 15 C 0.508 3.492 16 O -0.514 6.514 17 N -0.597 5.597 18 C 0.077 3.923 19 C 0.247 3.753 20 C -0.528 4.528 21 H 0.057 0.943 22 C 0.062 3.938 23 N -0.895 5.895 24 Si 0.899 3.101 25 H -0.277 1.277 26 H -0.286 1.286 27 H -0.276 1.276 28 H 0.089 0.911 29 H 0.072 0.928 30 H 0.068 0.932 31 H 0.159 0.841 32 H 0.154 0.846 33 H 0.408 0.592 34 H 0.408 0.592 35 H 0.050 0.950 36 H 0.078 0.922 37 H 0.058 0.942 38 H 0.036 0.964 39 H 0.046 0.954 40 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.667 3.739 -27.535 28.177 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.227 4.227 2 C 0.008 3.992 3 H 0.124 0.876 4 O -0.213 6.213 5 C 0.373 3.627 6 O -0.396 6.396 7 C -0.092 4.092 8 C -0.066 4.066 9 C -0.193 4.193 10 C 0.107 3.893 11 N -0.387 5.387 12 C -0.077 4.077 13 Cl 0.004 6.996 14 N -0.087 5.087 15 C 0.292 3.708 16 O -0.388 6.388 17 N -0.331 5.331 18 C -0.067 4.067 19 C 0.129 3.871 20 C -0.567 4.567 21 H 0.075 0.925 22 C -0.140 4.140 23 N -0.534 5.534 24 Si 0.726 3.274 25 H -0.202 1.202 26 H -0.212 1.212 27 H -0.201 1.201 28 H 0.107 0.893 29 H 0.091 0.909 30 H 0.087 0.913 31 H 0.177 0.823 32 H 0.172 0.828 33 H 0.239 0.761 34 H 0.238 0.762 35 H 0.068 0.932 36 H 0.096 0.904 37 H 0.076 0.924 38 H 0.054 0.946 39 H 0.064 0.936 40 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -4.518 2.790 -26.545 27.070 hybrid contribution 1.256 0.578 -0.624 1.517 sum -3.262 3.367 -27.169 27.571 Atomic orbital electron populations 1.22278 0.92304 1.04124 1.03955 1.22707 0.95819 0.97624 0.83003 0.87613 1.86812 1.75648 1.40034 1.18833 1.20541 0.74078 0.84536 0.83561 1.90828 1.49235 1.15275 1.84253 1.19544 1.08271 0.88542 0.92859 1.21922 0.92333 1.01929 0.90411 1.20963 1.06469 0.91621 1.00229 1.18557 0.91329 0.92257 0.87183 1.42502 1.72650 1.12381 1.11171 1.21034 1.08332 0.88509 0.89857 1.98404 1.94196 1.08878 1.98099 1.66787 1.05254 1.10441 1.26197 1.19741 0.81275 0.86007 0.83771 1.90731 1.39243 1.23222 1.85645 1.48061 1.54252 1.23951 1.06864 1.21833 0.95341 0.86775 1.02770 1.19336 0.94235 0.93828 0.79739 1.21399 1.01071 1.23015 1.11215 0.92475 1.24931 0.98170 0.94901 0.96048 1.69927 1.38146 1.28029 1.17264 0.86549 0.84327 0.78748 0.77756 1.20235 1.21158 1.20143 0.89261 0.90881 0.91315 0.82313 0.82817 0.76094 0.76225 0.93175 0.90357 0.92359 0.94628 0.93635 0.92642 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.35 9.28 37.16 0.34 -2.00 16 2 C 0.07 1.20 2.17 -27.89 -0.06 1.13 16 3 H 0.11 1.76 6.15 -51.93 -0.32 1.45 16 4 O -0.30 -5.70 9.23 -47.27 -0.44 -6.14 16 5 C 0.53 8.64 7.91 34.60 0.27 8.91 16 6 O -0.51 -8.21 15.57 -19.25 -0.30 -8.51 16 7 C 0.05 0.64 6.74 -83.04 -0.56 0.08 16 8 C -0.05 -0.43 9.62 -39.09 -0.38 -0.81 16 9 C -0.16 -1.12 10.02 -39.15 -0.39 -1.51 16 10 C 0.22 1.76 6.79 -83.62 -0.57 1.19 16 11 N -0.85 -3.64 9.02 32.53 0.29 -3.35 16 12 C 0.10 1.15 7.30 -17.22 -0.13 1.03 16 13 Cl -0.02 -0.26 27.76 -51.86 -1.44 -1.70 16 14 N -0.37 -5.63 10.08 -6.80 -0.07 -5.70 16 15 C 0.51 11.48 7.10 -10.99 -0.08 11.40 16 16 O -0.51 -14.14 16.09 -14.05 -0.23 -14.36 16 17 N -0.60 -13.12 2.86 -182.96 -0.52 -13.64 16 18 C 0.08 1.23 8.92 59.84 0.53 1.76 16 19 C 0.25 6.61 5.16 -5.19 -0.03 6.58 16 20 C -0.53 -15.33 9.39 -34.44 -0.32 -15.66 16 21 H 0.06 1.66 7.81 -52.49 -0.41 1.25 16 22 C 0.06 1.80 5.46 -17.82 -0.10 1.70 16 23 N -0.89 -27.00 13.29 55.43 0.74 -26.27 16 24 Si 0.90 22.33 29.54 -169.99 -5.02 17.31 16 25 H -0.28 -6.65 7.11 56.52 0.40 -6.24 16 26 H -0.29 -6.96 7.11 56.52 0.40 -6.56 16 27 H -0.28 -6.93 7.11 56.52 0.40 -6.52 16 28 H 0.09 1.08 5.12 -51.93 -0.27 0.81 16 29 H 0.07 1.05 8.14 -51.93 -0.42 0.62 16 30 H 0.07 0.84 8.14 -51.93 -0.42 0.42 16 31 H 0.16 1.24 7.63 -52.49 -0.40 0.84 16 32 H 0.15 0.47 8.06 -52.49 -0.42 0.05 16 33 H 0.41 1.61 7.51 -40.82 -0.31 1.31 16 34 H 0.41 0.55 8.85 -40.82 -0.36 0.19 16 35 H 0.05 0.67 7.02 -51.93 -0.36 0.30 16 36 H 0.08 1.28 8.07 -51.93 -0.42 0.86 16 37 H 0.06 0.79 6.08 -51.93 -0.32 0.48 16 38 H 0.04 0.94 8.07 -51.93 -0.42 0.52 16 39 H 0.05 1.37 7.42 -51.93 -0.39 0.99 16 40 H 0.26 7.52 8.31 -40.82 -0.34 7.19 16 LS Contribution 362.97 15.07 5.47 5.47 Total: -1.00 -37.80 362.97 -7.34 -45.14 By element: Atomic # 1 Polarization: 2.31 SS G_CDS: -4.37 Total: -2.06 kcal Atomic # 6 Polarization: 15.27 SS G_CDS: -1.45 Total: 13.81 kcal Atomic # 7 Polarization: -49.39 SS G_CDS: 0.44 Total: -48.95 kcal Atomic # 8 Polarization: -28.05 SS G_CDS: -0.96 Total: -29.01 kcal Atomic # 14 Polarization: 22.33 SS G_CDS: -5.02 Total: 17.31 kcal Atomic # 17 Polarization: -0.26 SS G_CDS: -1.44 Total: -1.70 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -37.80 -7.34 -45.14 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000772077647.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.343 kcal (2) G-P(sol) polarization free energy of solvation -37.797 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -69.140 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.338 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.135 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.479 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds