Wall clock time and date at job start Sat Apr 11 2020 06:16:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 O 1.21293 * 120.00230 * 2 1 4 4 C 1.46792 * 119.99664 * 179.97438 * 2 1 3 5 5 C 1.40024 * 120.21858 * 0.02562 * 4 2 1 6 6 C 1.37773 * 119.86584 * 179.97438 * 5 4 2 7 7 Cl 1.73605 * 119.84230 * 180.02562 * 6 5 4 8 8 C 1.38724 * 120.31493 * 0.02683 * 6 5 4 9 9 C 1.38051 * 120.43898 * 359.67250 * 8 6 5 10 10 C 1.38683 * 120.12656 * 0.60249 * 9 8 6 11 11 O 1.35619 * 120.15894 * 179.69596 * 10 9 8 12 12 C 1.42900 * 116.99816 * 359.72382 * 11 10 9 13 13 C 1.53002 * 109.46918 * 179.97438 * 12 11 10 14 14 H 1.09001 * 109.46823 * 55.00822 * 13 12 11 15 15 O 1.42899 * 109.47103 * 295.00344 * 13 12 11 16 16 C 1.53000 * 109.46726 * 175.00484 * 13 12 11 17 17 N 1.46904 * 109.46815 * 180.45976 * 16 13 12 18 18 C 1.46899 * 110.99898 * 199.84806 * 17 16 13 19 19 C 1.46907 * 110.99778 * 75.89878 * 17 16 13 20 20 C 1.50705 * 109.46801 * 190.00021 * 19 17 16 21 21 H 1.08000 * 120.00039 * 359.97438 * 20 19 17 22 22 C 1.37881 * 119.99700 * 179.97438 * 20 19 17 23 23 N 1.31512 * 120.00014 * 359.97438 * 22 20 19 24 24 Si 1.86799 * 119.99637 * 179.97438 * 22 20 19 25 25 H 1.48503 * 109.46790 * 90.00184 * 24 22 20 26 26 H 1.48497 * 109.46948 * 209.99634 * 24 22 20 27 27 H 1.48496 * 109.47396 * 330.00182 * 24 22 20 28 28 H 1.09006 * 109.47520 * 270.00294 * 1 2 3 29 29 H 1.08999 * 109.47458 * 29.99990 * 1 2 3 30 30 H 1.09001 * 109.47479 * 149.99783 * 1 2 3 31 31 H 1.07999 * 120.06262 * 359.96341 * 5 4 2 32 32 H 1.08002 * 119.78040 * 180.02562 * 8 6 5 33 33 H 1.08003 * 119.93993 * 180.30511 * 9 8 6 34 34 H 1.09001 * 109.46831 * 60.00360 * 12 11 10 35 35 H 1.08996 * 109.47545 * 300.00190 * 12 11 10 36 36 H 0.96698 * 114.00245 * 299.99745 * 15 13 12 37 37 H 1.09000 * 109.47349 * 300.45489 * 16 13 12 38 38 H 1.09001 * 109.47706 * 60.46216 * 16 13 12 39 39 H 1.08999 * 109.47104 * 64.82506 * 18 17 16 40 40 H 1.09004 * 109.47084 * 184.82138 * 18 17 16 41 41 H 1.09003 * 109.47573 * 304.82062 * 18 17 16 42 42 H 1.09002 * 109.46729 * 309.99402 * 19 17 16 43 43 H 1.08997 * 109.47420 * 69.99907 * 19 17 16 44 44 H 0.96996 * 119.99686 * 180.02562 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 8 2.1135 1.0504 0.0000 4 6 2.2408 -1.2713 0.0006 5 6 1.5453 -2.4866 0.0006 6 6 2.2414 -3.6755 0.0006 7 17 1.3784 -5.1818 -0.0001 8 6 3.6286 -3.6747 0.0011 9 6 4.3273 -2.4840 -0.0051 10 6 3.6451 -1.2766 0.0006 11 8 4.3309 -0.1066 0.0007 12 6 5.7574 -0.1907 0.0009 13 6 6.3514 1.2193 0.0003 14 1 5.9493 1.7832 0.8419 15 8 6.0117 1.8788 -1.2210 16 6 7.8737 1.1313 0.1261 17 7 8.4432 2.4855 0.1366 18 6 9.8694 2.4595 -0.2143 19 6 8.2329 3.1348 1.4375 20 6 8.6040 4.5920 1.3373 21 1 8.9608 4.9953 0.4010 22 6 8.4880 5.4104 2.4409 23 7 8.0531 4.9195 3.5808 24 14 8.9487 7.2164 2.3168 25 1 7.7560 8.0050 1.9159 26 1 9.4377 7.6942 3.6351 27 1 10.0185 7.3858 1.3009 28 1 -0.3634 0.0001 1.0277 29 1 -0.3634 0.8900 -0.5138 30 1 -0.3634 -0.8900 -0.5139 31 1 0.4653 -2.4918 0.0008 32 1 4.1656 -4.6117 0.0007 33 1 5.4073 -2.4928 -0.0096 34 1 6.0899 -0.7250 -0.8891 35 1 6.0898 -0.7251 0.8908 36 1 6.3381 1.4314 -2.0137 37 1 8.1328 0.6211 1.0538 38 1 8.2767 0.5743 -0.7198 39 1 9.9842 2.1177 -1.2430 40 1 10.2861 3.4619 -0.1159 41 1 10.3961 1.7797 0.4554 42 1 7.1847 3.0457 1.7228 43 1 8.8566 2.6520 2.1897 44 1 7.9712 5.4953 4.3570 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000414166742.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:16:37 Heat of formation + Delta-G solvation = -96.570523 kcal Electronic energy + Delta-G solvation = -27016.963216 eV Core-core repulsion = 22961.137659 eV Total energy + Delta-G solvation = -4055.825557 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 341.123 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -40.85876 -38.94801 -38.24417 -37.39930 -36.45453 -35.36249 -32.49501 -32.46048 -30.91059 -29.88564 -29.43696 -27.35947 -26.47845 -24.45070 -23.79157 -22.53164 -21.67034 -20.31507 -20.04168 -18.43023 -17.08084 -16.77758 -16.63620 -16.29537 -15.79140 -15.37623 -15.17568 -14.98967 -14.77335 -14.73388 -14.35372 -14.24608 -13.65783 -13.61437 -13.45716 -13.22966 -12.79450 -12.54586 -12.31932 -12.25554 -11.97569 -11.93819 -11.85075 -11.50026 -11.38137 -11.20337 -10.92777 -10.88175 -10.72081 -10.61544 -10.36927 -9.79725 -9.73270 -9.70934 -9.57217 -9.15985 -8.48703 -8.40173 -7.25859 -5.99884 -4.00426 0.29570 0.81764 1.75126 2.20290 2.83806 3.28709 3.35903 3.41598 3.44718 3.79728 4.21869 4.43720 4.44139 4.58498 4.60058 4.68057 4.87886 4.95757 4.96800 5.05975 5.12994 5.21720 5.27778 5.35791 5.38130 5.44678 5.46954 5.55138 5.61517 5.73037 5.90146 5.91516 6.06152 6.08141 6.26629 6.36785 6.70062 7.07965 7.26177 7.29044 7.52817 7.80358 8.05898 8.09588 8.19221 8.54246 9.06312 9.63359 11.11356 Molecular weight = 341.12amu Principal moments of inertia in cm(-1) A = 0.016724 B = 0.002293 C = 0.002134 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1673.872857 B =12210.722341 C =13119.234046 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C 0.384 3.616 3 O -0.419 6.419 4 C -0.197 4.197 5 C -0.027 4.027 6 C -0.094 4.094 7 Cl -0.070 7.070 8 C -0.037 4.037 9 C -0.214 4.214 10 C 0.196 3.804 11 O -0.263 6.263 12 C 0.019 3.981 13 C 0.120 3.880 14 H 0.115 0.885 15 O -0.527 6.527 16 C 0.030 3.970 17 N -0.530 5.530 18 C 0.038 3.962 19 C 0.191 3.809 20 C -0.505 4.505 21 H 0.064 0.936 22 C 0.054 3.946 23 N -0.900 5.900 24 Si 0.899 3.101 25 H -0.279 1.279 26 H -0.288 1.288 27 H -0.274 1.274 28 H 0.096 0.904 29 H 0.089 0.911 30 H 0.082 0.918 31 H 0.148 0.852 32 H 0.139 0.861 33 H 0.144 0.856 34 H 0.067 0.933 35 H 0.073 0.927 36 H 0.360 0.640 37 H 0.036 0.964 38 H 0.063 0.937 39 H 0.045 0.955 40 H 0.079 0.921 41 H 0.008 0.992 42 H 0.032 0.968 43 H -0.010 1.010 44 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.578 -22.154 -8.440 26.837 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.255 4.255 2 C 0.259 3.741 3 O -0.292 6.292 4 C -0.199 4.199 5 C -0.046 4.046 6 C -0.121 4.121 7 Cl -0.041 7.041 8 C -0.056 4.056 9 C -0.233 4.233 10 C 0.146 3.854 11 O -0.172 6.172 12 C -0.057 4.057 13 C 0.059 3.941 14 H 0.132 0.868 15 O -0.330 6.330 16 C -0.100 4.100 17 N -0.254 5.254 18 C -0.110 4.110 19 C 0.066 3.934 20 C -0.543 4.543 21 H 0.082 0.918 22 C -0.147 4.147 23 N -0.539 5.539 24 Si 0.727 3.273 25 H -0.205 1.205 26 H -0.214 1.214 27 H -0.199 1.199 28 H 0.114 0.886 29 H 0.108 0.892 30 H 0.101 0.899 31 H 0.166 0.834 32 H 0.157 0.843 33 H 0.162 0.838 34 H 0.085 0.915 35 H 0.092 0.908 36 H 0.205 0.795 37 H 0.054 0.946 38 H 0.082 0.918 39 H 0.063 0.937 40 H 0.097 0.903 41 H 0.027 0.973 42 H 0.050 0.950 43 H 0.007 0.993 44 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -12.942 -20.723 -8.189 25.768 hybrid contribution 1.023 -0.579 0.450 1.259 sum -11.919 -21.302 -7.738 25.607 Atomic orbital electron populations 1.22228 0.93808 1.04741 1.04713 1.22115 0.91397 0.87297 0.73270 1.90725 1.71519 1.33296 1.33651 1.19969 0.90850 0.95679 1.13373 1.21179 1.00502 0.89048 0.93865 1.20595 0.92461 0.87272 1.11724 1.98370 1.76814 1.31609 1.97338 1.21041 0.91937 0.98707 0.93916 1.21289 1.01135 0.91162 1.09749 1.19473 0.91063 0.85836 0.89006 1.86440 1.19836 1.25914 1.85051 1.23935 0.78317 1.01505 1.01893 1.21918 0.93139 0.89039 0.89958 0.86763 1.86789 1.79021 1.52915 1.14231 1.22561 0.94142 0.93166 1.00104 1.61982 1.14072 1.14069 1.35265 1.22234 0.88881 1.02181 0.97746 1.19808 0.96776 0.94156 0.82668 1.21132 1.43273 0.93480 0.96459 0.91803 1.24990 0.95496 0.98910 0.95283 1.69952 1.46988 1.35883 1.01099 0.86483 0.78763 0.84958 0.77119 1.20543 1.21384 1.19886 0.88560 0.89227 0.89941 0.83398 0.84270 0.83833 0.91510 0.90842 0.79450 0.94591 0.91846 0.93668 0.90255 0.97305 0.95021 0.99255 0.92944 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -1.50 9.75 36.00 0.35 -1.15 16 2 C 0.38 4.75 7.21 -30.85 -0.22 4.53 16 3 O -0.42 -7.35 15.91 -16.37 -0.26 -7.61 16 4 C -0.20 -2.22 5.88 -104.95 -0.62 -2.84 16 5 C -0.03 -0.23 9.13 -39.08 -0.36 -0.58 16 6 C -0.09 -0.78 6.31 -39.57 -0.25 -1.03 16 7 Cl -0.07 -0.53 28.94 -51.86 -1.50 -2.03 16 8 C -0.04 -0.30 9.81 -39.47 -0.39 -0.69 16 9 C -0.21 -2.02 9.03 -39.49 -0.36 -2.37 16 10 C 0.20 2.42 6.71 -38.59 -0.26 2.16 16 11 O -0.26 -3.98 8.17 -44.41 -0.36 -4.34 16 12 C 0.02 0.25 4.37 37.16 0.16 0.41 16 13 C 0.12 2.01 3.31 -26.73 -0.09 1.92 16 14 H 0.11 2.36 6.78 -51.93 -0.35 2.00 16 15 O -0.53 -9.47 13.18 -40.09 -0.53 -10.00 16 16 C 0.03 0.50 4.66 -3.82 -0.02 0.48 16 17 N -0.53 -11.37 4.56 -244.36 -1.11 -12.49 16 18 C 0.04 0.73 9.37 60.06 0.56 1.29 16 19 C 0.19 5.02 4.55 -4.97 -0.02 5.00 16 20 C -0.50 -14.49 8.39 -34.44 -0.29 -14.78 16 21 H 0.06 1.82 7.16 -52.49 -0.38 1.44 16 22 C 0.05 1.58 5.46 -17.82 -0.10 1.48 16 23 N -0.90 -27.23 13.29 55.43 0.74 -26.49 16 24 Si 0.90 22.19 29.54 -169.99 -5.02 17.17 16 25 H -0.28 -6.89 7.11 56.52 0.40 -6.49 16 26 H -0.29 -7.00 7.11 56.52 0.40 -6.59 16 27 H -0.27 -6.59 7.11 56.52 0.40 -6.19 16 28 H 0.10 0.60 8.14 -51.93 -0.42 0.18 16 29 H 0.09 0.69 8.14 -51.93 -0.42 0.27 16 30 H 0.08 0.40 6.47 -51.93 -0.34 0.07 16 31 H 0.15 0.84 6.36 -52.49 -0.33 0.50 16 32 H 0.14 0.81 8.06 -52.49 -0.42 0.39 16 33 H 0.14 1.09 6.30 -52.48 -0.33 0.76 16 34 H 0.07 0.65 7.65 -51.93 -0.40 0.25 16 35 H 0.07 0.81 7.67 -51.93 -0.40 0.41 16 36 H 0.36 4.75 9.05 45.56 0.41 5.17 16 37 H 0.04 0.59 8.00 -51.93 -0.42 0.18 16 38 H 0.06 0.86 7.94 -51.93 -0.41 0.44 16 39 H 0.04 0.72 8.14 -51.93 -0.42 0.30 16 40 H 0.08 1.66 6.66 -51.93 -0.35 1.31 16 41 H 0.01 0.15 8.13 -51.93 -0.42 -0.27 16 42 H 0.03 0.90 6.63 -51.93 -0.34 0.55 16 43 H -0.01 -0.29 8.12 -51.93 -0.42 -0.71 16 44 H 0.26 7.47 8.31 -40.82 -0.34 7.13 16 LS Contribution 382.54 15.07 5.76 5.76 Total: -1.00 -35.62 382.54 -9.47 -45.09 By element: Atomic # 1 Polarization: 6.41 SS G_CDS: -5.30 Total: 1.12 kcal Atomic # 6 Polarization: -4.29 SS G_CDS: -1.89 Total: -6.18 kcal Atomic # 7 Polarization: -38.60 SS G_CDS: -0.38 Total: -38.98 kcal Atomic # 8 Polarization: -20.80 SS G_CDS: -1.15 Total: -21.95 kcal Atomic # 14 Polarization: 22.19 SS G_CDS: -5.02 Total: 17.17 kcal Atomic # 17 Polarization: -0.53 SS G_CDS: -1.50 Total: -2.03 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -35.62 -9.47 -45.09 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000414166742.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.478 kcal (2) G-P(sol) polarization free energy of solvation -35.619 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.098 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.473 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.092 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.571 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds