Wall clock time and date at job start Sat Apr 11 2020 06:16:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 O 1.21302 * 119.99991 * 2 1 4 4 C 1.46711 * 119.99600 * 179.97438 * 2 1 3 5 5 C 1.40067 * 120.21044 * 0.02562 * 4 2 1 6 6 C 1.37604 * 119.88975 * 179.97438 * 5 4 2 7 7 C 1.38790 * 120.32794 * 359.97438 * 6 5 4 8 8 Cl 1.73604 * 119.78494 * 179.97438 * 7 6 5 9 9 C 1.38208 * 120.42651 * 359.74221 * 7 6 5 10 10 C 1.38614 * 120.09825 * 0.51768 * 9 7 6 11 11 O 1.35594 * 120.16712 * 179.76570 * 10 9 7 12 12 C 1.42906 * 117.00014 * 359.72369 * 11 10 9 13 13 C 1.52998 * 109.47322 * 180.02562 * 12 11 10 14 14 H 1.08992 * 109.47135 * 54.99494 * 13 12 11 15 15 O 1.42897 * 109.46674 * 294.99501 * 13 12 11 16 16 C 1.53004 * 109.46799 * 174.99810 * 13 12 11 17 17 N 1.46898 * 109.46619 * 184.99872 * 16 13 12 18 18 C 1.46901 * 111.00443 * 66.04574 * 17 16 13 19 19 C 1.46906 * 110.99820 * 189.99887 * 17 16 13 20 20 C 1.50696 * 109.47351 * 169.99890 * 19 17 16 21 21 H 1.08007 * 119.99780 * 0.02562 * 20 19 17 22 22 C 1.37878 * 120.00506 * 180.02562 * 20 19 17 23 23 N 1.31515 * 119.99253 * 359.97438 * 22 20 19 24 24 Si 1.86795 * 120.00341 * 180.02562 * 22 20 19 25 25 H 1.48501 * 109.47238 * 59.99702 * 24 22 20 26 26 H 1.48503 * 109.47230 * 179.97438 * 24 22 20 27 27 H 1.48503 * 109.47102 * 299.99648 * 24 22 20 28 28 H 1.08995 * 109.47169 * 270.00602 * 1 2 3 29 29 H 1.09003 * 109.46663 * 30.00308 * 1 2 3 30 30 H 1.08996 * 109.46841 * 149.99801 * 1 2 3 31 31 H 1.07994 * 120.05203 * 359.97438 * 5 4 2 32 32 H 1.08003 * 119.83820 * 180.02562 * 6 5 4 33 33 H 1.08002 * 119.95636 * 180.27619 * 9 7 6 34 34 H 1.08994 * 109.46880 * 59.99298 * 12 11 10 35 35 H 1.09004 * 109.46141 * 300.00091 * 12 11 10 36 36 H 0.96701 * 114.00549 * 300.00026 * 15 13 12 37 37 H 1.08994 * 109.47270 * 64.99737 * 16 13 12 38 38 H 1.08999 * 109.47017 * 304.99614 * 16 13 12 39 39 H 1.09002 * 109.47401 * 183.95136 * 18 17 16 40 40 H 1.09001 * 109.46874 * 63.95149 * 18 17 16 41 41 H 1.09004 * 109.46970 * 303.95282 * 18 17 16 42 42 H 1.08997 * 109.46995 * 289.99871 * 19 17 16 43 43 H 1.09001 * 109.46848 * 49.99877 * 19 17 16 44 44 H 0.96999 * 119.99606 * 179.97438 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 8 2.1136 1.0505 0.0000 4 6 2.2405 -1.2706 0.0006 5 6 1.5446 -2.4861 0.0006 6 6 2.2392 -3.6740 0.0006 7 6 3.6271 -3.6743 0.0000 8 17 4.4891 -5.1811 0.0007 9 6 4.3272 -2.4827 -0.0059 10 6 3.6455 -1.2758 -0.0005 11 8 4.3310 -0.1059 -0.0015 12 6 5.7576 -0.1899 -0.0021 13 6 6.3516 1.2200 -0.0025 14 1 5.9497 1.7838 0.8393 15 8 6.0113 1.8798 -1.2235 16 6 7.8739 1.1321 0.1226 17 7 8.4342 2.4847 0.2426 18 6 8.0162 3.1182 1.5003 19 6 9.8985 2.4602 0.1268 20 6 10.4167 3.8702 0.0077 21 1 9.7273 4.7015 0.0174 22 6 11.7709 4.0991 -0.1138 23 7 12.6104 3.0868 -0.1252 24 14 12.4133 5.8470 -0.2608 25 1 12.0257 6.6200 0.9465 26 1 13.8935 5.8222 -0.3779 27 1 11.8315 6.4884 -1.4672 28 1 -0.3633 0.0001 1.0276 29 1 -0.3633 0.8900 -0.5139 30 1 -0.3633 -0.8899 -0.5139 31 1 0.4646 -2.4910 0.0006 32 1 1.7017 -4.6108 0.0002 33 1 5.4072 -2.4918 -0.0108 34 1 6.0896 -0.7248 -0.8918 35 1 6.0903 -0.7238 0.8882 36 1 6.3374 1.4325 -2.0165 37 1 8.2838 0.6462 -0.7627 38 1 8.1328 0.5518 1.0082 39 1 8.3865 4.1429 1.5318 40 1 8.4240 2.5585 2.3421 41 1 6.9278 3.1232 1.5604 42 1 10.3251 1.9899 1.0127 43 1 10.1834 1.8923 -0.7589 44 1 13.5631 3.2477 -0.2110 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000416404657.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:16:43 Heat of formation + Delta-G solvation = -96.988888 kcal Electronic energy + Delta-G solvation = -26847.190623 eV Core-core repulsion = 22791.346924 eV Total energy + Delta-G solvation = -4055.843699 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 341.123 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -40.94132 -39.05073 -38.34025 -37.46105 -36.68095 -35.41351 -32.55080 -32.30892 -31.06961 -30.14452 -29.43221 -27.29529 -26.49664 -24.53385 -24.02831 -22.57495 -21.51905 -20.36368 -20.14746 -18.59819 -17.13808 -16.71562 -16.65445 -16.39497 -15.77604 -15.66964 -15.34351 -15.02902 -14.96338 -14.69926 -14.44187 -14.25337 -13.77132 -13.68271 -13.48843 -13.29784 -12.82042 -12.62396 -12.45376 -12.34807 -12.08233 -11.95386 -11.87788 -11.44324 -11.39853 -11.15623 -11.09914 -10.93627 -10.80199 -10.67585 -10.31290 -10.04300 -9.84886 -9.70922 -9.42142 -9.18572 -8.69590 -8.43732 -7.25220 -6.03358 -4.04332 0.13519 0.84847 1.56049 2.08021 2.74007 3.21983 3.34913 3.38217 3.42244 3.74488 4.15958 4.39105 4.48741 4.51271 4.52581 4.62673 4.72800 4.88938 4.89312 4.95891 5.06637 5.09615 5.14956 5.29429 5.33074 5.36866 5.43974 5.53467 5.60464 5.65873 5.82003 5.93589 6.03584 6.12584 6.24245 6.33516 6.76140 6.97748 7.23015 7.29017 7.42046 7.78315 7.94413 8.06832 8.16460 8.52242 9.03249 9.59912 11.07656 Molecular weight = 341.12amu Principal moments of inertia in cm(-1) A = 0.015213 B = 0.002249 C = 0.001996 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1840.103610 B =12444.842405 C =14021.782516 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C 0.385 3.615 3 O -0.426 6.426 4 C -0.206 4.206 5 C -0.024 4.024 6 C -0.169 4.169 7 C 0.036 3.964 8 Cl -0.059 7.059 9 C -0.220 4.220 10 C 0.203 3.797 11 O -0.263 6.263 12 C 0.017 3.983 13 C 0.118 3.882 14 H 0.108 0.892 15 O -0.533 6.533 16 C 0.028 3.972 17 N -0.528 5.528 18 C 0.035 3.965 19 C 0.194 3.806 20 C -0.506 4.506 21 H 0.064 0.936 22 C 0.054 3.946 23 N -0.901 5.901 24 Si 0.900 3.100 25 H -0.277 1.277 26 H -0.288 1.288 27 H -0.275 1.275 28 H 0.095 0.905 29 H 0.088 0.912 30 H 0.083 0.917 31 H 0.149 0.851 32 H 0.140 0.860 33 H 0.146 0.854 34 H 0.070 0.930 35 H 0.073 0.927 36 H 0.368 0.632 37 H 0.074 0.926 38 H 0.032 0.968 39 H 0.076 0.924 40 H 0.011 0.989 41 H 0.048 0.952 42 H -0.010 1.010 43 H 0.029 0.971 44 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -24.938 -17.800 0.881 30.651 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.255 4.255 2 C 0.260 3.740 3 O -0.299 6.299 4 C -0.208 4.208 5 C -0.043 4.043 6 C -0.188 4.188 7 C 0.009 3.991 8 Cl -0.029 7.029 9 C -0.240 4.240 10 C 0.153 3.847 11 O -0.174 6.174 12 C -0.059 4.059 13 C 0.058 3.942 14 H 0.126 0.874 15 O -0.337 6.337 16 C -0.101 4.101 17 N -0.253 5.253 18 C -0.114 4.114 19 C 0.069 3.931 20 C -0.545 4.545 21 H 0.082 0.918 22 C -0.147 4.147 23 N -0.541 5.541 24 Si 0.727 3.273 25 H -0.203 1.203 26 H -0.214 1.214 27 H -0.201 1.201 28 H 0.114 0.886 29 H 0.107 0.893 30 H 0.102 0.898 31 H 0.166 0.834 32 H 0.158 0.842 33 H 0.164 0.836 34 H 0.088 0.912 35 H 0.092 0.908 36 H 0.215 0.785 37 H 0.093 0.907 38 H 0.050 0.950 39 H 0.094 0.906 40 H 0.029 0.971 41 H 0.066 0.934 42 H 0.008 0.992 43 H 0.047 0.953 44 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -24.840 -16.473 0.890 29.819 hybrid contribution 1.444 -0.711 0.286 1.634 sum -23.397 -17.184 1.176 29.053 Atomic orbital electron populations 1.22224 0.93830 1.04783 1.04616 1.22136 0.91387 0.87399 0.73032 1.90694 1.71598 1.33520 1.34066 1.20140 0.90771 0.96387 1.13522 1.21266 1.00272 0.89845 0.92896 1.20887 0.91680 0.99430 1.06779 1.20950 0.92533 0.87005 0.98634 1.98406 1.76996 1.31171 1.96371 1.21181 1.01445 0.90417 1.10928 1.19198 0.90910 0.85181 0.89390 1.86416 1.19878 1.25710 1.85348 1.23961 0.78183 1.01491 1.02298 1.21951 0.93469 0.89047 0.89751 0.87398 1.86693 1.79162 1.53246 1.14555 1.22622 0.93123 0.93368 1.01014 1.62006 1.14013 1.14993 1.34263 1.22287 0.98456 1.00954 0.89690 1.19756 0.79548 0.97915 0.95904 1.21124 0.91580 0.92315 1.49470 0.91785 1.24992 0.96876 0.97343 0.95454 1.69948 1.02813 1.30436 1.50858 0.86532 0.77420 0.84529 0.78776 1.20260 1.21385 1.20085 0.88637 0.89322 0.89848 0.83387 0.84184 0.83646 0.91160 0.90835 0.78548 0.90747 0.95019 0.90564 0.97067 0.93354 0.99179 0.95296 0.92882 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -1.15 9.75 36.01 0.35 -0.80 16 2 C 0.38 4.09 7.21 -30.88 -0.22 3.87 16 3 O -0.43 -6.62 15.91 -16.38 -0.26 -6.88 16 4 C -0.21 -2.03 5.88 -104.94 -0.62 -2.65 16 5 C -0.02 -0.16 9.35 -39.13 -0.37 -0.52 16 6 C -0.17 -1.14 9.80 -39.61 -0.39 -1.53 16 7 C 0.04 0.31 6.32 -39.39 -0.25 0.06 16 8 Cl -0.06 -0.48 28.94 -51.86 -1.50 -1.98 16 9 C -0.22 -2.15 8.80 -39.45 -0.35 -2.50 16 10 C 0.20 2.34 6.71 -38.59 -0.26 2.08 16 11 O -0.26 -3.65 8.17 -44.34 -0.36 -4.01 16 12 C 0.02 0.20 4.37 37.16 0.16 0.36 16 13 C 0.12 1.79 3.21 -26.73 -0.09 1.70 16 14 H 0.11 1.77 6.26 -51.93 -0.33 1.45 16 15 O -0.53 -8.96 13.25 -40.08 -0.53 -9.50 16 16 C 0.03 0.48 4.60 -3.82 -0.02 0.46 16 17 N -0.53 -11.50 4.70 -244.37 -1.15 -12.65 16 18 C 0.03 0.70 9.17 60.07 0.55 1.25 16 19 C 0.19 5.05 4.72 -4.97 -0.02 5.03 16 20 C -0.51 -14.40 8.52 -34.44 -0.29 -14.69 16 21 H 0.06 1.82 7.10 -52.48 -0.37 1.45 16 22 C 0.05 1.56 5.46 -17.82 -0.10 1.46 16 23 N -0.90 -26.85 13.29 55.43 0.74 -26.12 16 24 Si 0.90 21.92 29.54 -169.99 -5.02 16.90 16 25 H -0.28 -6.63 7.11 56.52 0.40 -6.23 16 26 H -0.29 -6.92 7.11 56.52 0.40 -6.52 16 27 H -0.28 -6.65 7.11 56.52 0.40 -6.24 16 28 H 0.10 0.42 8.14 -51.93 -0.42 -0.01 16 29 H 0.09 0.54 8.14 -51.93 -0.42 0.12 16 30 H 0.08 0.26 6.46 -51.93 -0.34 -0.08 16 31 H 0.15 0.42 6.35 -52.49 -0.33 0.09 16 32 H 0.14 0.63 8.06 -52.48 -0.42 0.20 16 33 H 0.15 1.30 6.30 -52.49 -0.33 0.97 16 34 H 0.07 0.71 7.65 -51.93 -0.40 0.32 16 35 H 0.07 0.76 7.67 -51.93 -0.40 0.37 16 36 H 0.37 4.87 9.05 45.56 0.41 5.29 16 37 H 0.07 1.21 7.93 -51.93 -0.41 0.80 16 38 H 0.03 0.51 8.12 -51.93 -0.42 0.09 16 39 H 0.08 1.64 6.86 -51.93 -0.36 1.29 16 40 H 0.01 0.21 8.14 -51.93 -0.42 -0.21 16 41 H 0.05 0.86 6.21 -51.93 -0.32 0.54 16 42 H -0.01 -0.27 8.12 -51.93 -0.42 -0.69 16 43 H 0.03 0.80 7.93 -51.93 -0.41 0.38 16 44 H 0.26 7.39 8.31 -40.82 -0.34 7.05 16 LS Contribution 381.79 15.07 5.75 5.75 Total: -1.00 -35.01 381.79 -9.49 -44.49 By element: Atomic # 1 Polarization: 5.66 SS G_CDS: -5.25 Total: 0.41 kcal Atomic # 6 Polarization: -4.52 SS G_CDS: -1.90 Total: -6.42 kcal Atomic # 7 Polarization: -38.36 SS G_CDS: -0.41 Total: -38.77 kcal Atomic # 8 Polarization: -19.23 SS G_CDS: -1.15 Total: -20.39 kcal Atomic # 14 Polarization: 21.92 SS G_CDS: -5.02 Total: 16.90 kcal Atomic # 17 Polarization: -0.48 SS G_CDS: -1.50 Total: -1.98 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -35.01 -9.49 -44.49 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000416404657.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.494 kcal (2) G-P(sol) polarization free energy of solvation -35.005 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.500 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.489 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.494 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.989 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds