Wall clock time and date at job start Sat Apr 11 2020 06:17:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 O 1.42896 * 109.47522 * 2 1 4 4 C 1.35923 * 116.99985 * 184.97492 * 3 2 1 5 5 C 1.38850 * 120.05978 * 273.79900 * 4 3 2 6 6 Cl 1.73599 * 120.04134 * 0.04629 * 5 4 3 7 7 C 1.38217 * 119.92365 * 180.02562 * 5 4 3 8 8 C 1.38298 * 120.04279 * 0.02562 * 7 5 4 9 9 C 1.38232 * 120.11454 * 359.67805 * 8 7 5 10 10 C 1.38189 * 120.07952 * 0.60261 * 9 8 7 11 11 C 1.50706 * 120.02514 * 179.69805 * 10 9 8 12 12 C 1.50693 * 109.46920 * 264.30092 * 11 10 9 13 13 O 1.21294 * 120.00384 * 5.56636 * 12 11 10 14 14 N 1.34782 * 119.99926 * 185.56478 * 12 11 10 15 15 C 1.37095 * 119.99655 * 354.64245 * 14 12 11 16 16 H 1.07998 * 120.00694 * 323.23809 * 15 14 12 17 17 C 1.38959 * 119.99618 * 143.23990 * 15 14 12 18 18 N 1.31415 * 119.99566 * 159.98209 * 17 15 14 19 19 Si 1.86797 * 120.00099 * 339.98562 * 17 15 14 20 20 H 1.48501 * 109.47179 * 95.46454 * 19 17 15 21 21 H 1.48499 * 109.46995 * 215.46282 * 19 17 15 22 22 H 1.48500 * 109.46965 * 335.46096 * 19 17 15 23 23 C 1.46501 * 120.00064 * 174.36532 * 14 12 11 24 24 C 1.52999 * 109.47110 * 90.00077 * 23 14 12 25 25 O 1.42899 * 109.46946 * 65.00127 * 24 23 14 26 26 C 1.42901 * 113.99967 * 180.02562 * 25 24 23 27 27 H 1.09001 * 109.46767 * 300.00363 * 1 2 3 28 28 H 1.09000 * 109.46780 * 60.00063 * 1 2 3 29 29 H 1.08992 * 109.47153 * 180.02562 * 1 2 3 30 30 H 1.09000 * 109.47090 * 239.99203 * 2 1 3 31 31 H 1.09009 * 109.46897 * 119.99993 * 2 1 3 32 32 H 1.07999 * 119.98059 * 180.02562 * 7 5 4 33 33 H 1.08000 * 119.93894 * 179.97438 * 8 7 5 34 34 H 1.08010 * 119.95916 * 180.31580 * 9 8 7 35 35 H 1.08994 * 109.47265 * 144.29168 * 11 10 9 36 36 H 1.09005 * 109.46798 * 24.29753 * 11 10 9 37 37 H 0.97002 * 119.99660 * 179.97438 * 18 17 15 38 38 H 1.09002 * 109.46899 * 210.00307 * 23 14 12 39 39 H 1.09003 * 109.46952 * 330.00232 * 23 14 12 40 40 H 1.08997 * 109.47223 * 184.99939 * 24 23 14 41 41 H 1.08996 * 109.47089 * 305.00330 * 24 23 14 42 42 H 1.09003 * 109.46491 * 299.99669 * 26 25 24 43 43 H 1.08998 * 109.47511 * 59.99576 * 26 25 24 44 44 H 1.08997 * 109.47149 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0065 1.3472 0.0000 4 6 3.3497 1.5267 -0.1050 5 6 4.1453 1.5050 1.0327 6 17 3.4260 1.2473 2.5915 7 6 5.5109 1.6884 0.9227 8 6 6.0841 1.8938 -0.3190 9 6 5.2943 1.9096 -1.4534 10 6 3.9278 1.7326 -1.3485 11 6 3.0672 1.7569 -2.5854 12 6 2.4961 3.1387 -2.7729 13 8 2.8405 4.0419 -2.0402 14 7 1.6025 3.3711 -3.7548 15 6 1.2957 2.3800 -4.6510 16 1 2.0648 1.7025 -4.9912 17 6 -0.0050 2.2473 -5.1217 18 7 -0.2364 1.5920 -6.2370 19 14 -1.4244 3.0003 -4.1690 20 1 -1.7448 4.3365 -4.7320 21 1 -2.6151 2.1194 -4.2764 22 1 -1.0417 3.1434 -2.7414 23 6 0.9546 4.6808 -3.8607 24 6 1.7931 5.5935 -4.7578 25 8 1.8085 5.0707 -6.0877 26 6 2.5691 5.8526 -7.0108 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0276 0.0005 30 1 1.8934 -0.5140 -0.8899 31 1 1.8934 -0.5139 0.8901 32 1 6.1306 1.6713 1.8070 33 1 7.1512 2.0373 -0.4030 34 1 5.7453 2.0652 -2.4225 35 1 2.2541 1.0393 -2.4764 36 1 3.6711 1.4925 -3.4535 37 1 -1.1444 1.4990 -6.5654 38 1 -0.0392 4.5606 -4.2921 39 1 0.8690 5.1251 -2.8690 40 1 1.3593 6.5934 -4.7656 41 1 2.8124 5.6425 -4.3749 42 1 2.1517 6.8581 -7.0653 43 1 3.6044 5.9067 -6.6744 44 1 2.5314 5.3893 -7.9967 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000457206491.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:17:32 Heat of formation + Delta-G solvation = -83.785556 kcal Electronic energy + Delta-G solvation = -28756.548383 eV Core-core repulsion = 24701.277223 eV Total energy + Delta-G solvation = -4055.271159 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 341.123 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -40.11498 -38.71818 -37.28010 -36.99552 -36.32230 -34.76540 -32.41801 -31.89846 -31.57012 -29.71325 -29.23502 -27.02353 -25.75351 -24.60051 -23.14822 -22.71853 -22.06592 -21.34171 -18.95614 -17.80850 -17.00976 -16.49337 -16.43482 -15.92721 -15.71378 -15.40288 -14.93803 -14.62964 -14.52782 -14.40910 -14.30463 -13.80803 -13.62958 -13.06513 -12.89322 -12.57615 -12.56455 -12.42529 -12.08687 -11.97515 -11.71278 -11.67124 -11.51179 -11.34826 -11.16757 -11.14573 -10.92012 -10.85539 -10.73999 -10.65716 -10.09422 -9.82622 -9.60748 -9.13967 -9.04522 -8.72501 -8.43579 -8.31243 -7.76908 -6.38383 -3.95559 1.22837 1.34718 2.23844 3.09577 3.25234 3.32784 3.51172 3.75653 3.93372 4.19100 4.39853 4.51739 4.86837 5.02692 5.10025 5.19264 5.31828 5.33914 5.44991 5.46587 5.49727 5.62429 5.69445 5.75764 5.80798 5.87982 5.91588 5.96312 6.03556 6.06271 6.07542 6.14059 6.23170 6.32058 6.33702 6.41105 6.44165 6.50661 6.71850 6.81476 7.38022 7.71627 7.83682 8.13416 8.30198 9.03795 9.41526 9.73666 10.72769 Molecular weight = 341.12amu Principal moments of inertia in cm(-1) A = 0.012837 B = 0.004302 C = 0.003602 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2180.740339 B = 6507.212375 C = 7772.086976 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C 0.062 3.938 3 O -0.319 6.319 4 C 0.122 3.878 5 C -0.058 4.058 6 Cl -0.071 7.071 7 C -0.111 4.111 8 C -0.115 4.115 9 C -0.093 4.093 10 C -0.052 4.052 11 C -0.079 4.079 12 C 0.487 3.513 13 O -0.594 6.594 14 N -0.455 5.455 15 C -0.328 4.328 16 H 0.101 0.899 17 C 0.075 3.925 18 N -0.858 5.858 19 Si 0.871 3.129 20 H -0.275 1.275 21 H -0.290 1.290 22 H -0.261 1.261 23 C 0.104 3.896 24 C 0.055 3.945 25 O -0.356 6.356 26 C 0.032 3.968 27 H 0.062 0.938 28 H 0.070 0.930 29 H 0.073 0.927 30 H 0.056 0.944 31 H 0.051 0.949 32 H 0.131 0.869 33 H 0.131 0.869 34 H 0.131 0.869 35 H 0.101 0.899 36 H 0.095 0.905 37 H 0.272 0.728 38 H 0.071 0.929 39 H 0.083 0.917 40 H 0.041 0.959 41 H 0.049 0.951 42 H 0.029 0.971 43 H 0.032 0.968 44 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.362 -1.489 8.809 11.576 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.012 4.012 3 O -0.236 6.236 4 C 0.077 3.923 5 C -0.085 4.085 6 Cl -0.042 7.042 7 C -0.130 4.130 8 C -0.134 4.134 9 C -0.111 4.111 10 C -0.053 4.053 11 C -0.118 4.118 12 C 0.277 3.723 13 O -0.479 6.479 14 N -0.176 5.176 15 C -0.455 4.455 16 H 0.119 0.881 17 C -0.132 4.132 18 N -0.493 5.493 19 Si 0.700 3.300 20 H -0.203 1.203 21 H -0.217 1.217 22 H -0.185 1.185 23 C -0.020 4.020 24 C -0.023 4.023 25 O -0.274 6.274 26 C -0.065 4.065 27 H 0.081 0.919 28 H 0.089 0.911 29 H 0.092 0.908 30 H 0.074 0.926 31 H 0.069 0.931 32 H 0.149 0.851 33 H 0.148 0.852 34 H 0.149 0.851 35 H 0.120 0.880 36 H 0.113 0.887 37 H 0.082 0.918 38 H 0.089 0.911 39 H 0.101 0.899 40 H 0.059 0.941 41 H 0.068 0.932 42 H 0.047 0.953 43 H 0.050 0.950 44 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 7.059 -1.189 9.109 11.585 hybrid contribution -0.671 0.532 0.332 0.918 sum 6.388 -0.657 9.440 11.418 Atomic orbital electron populations 1.21754 0.93109 1.02322 1.03704 1.22714 0.95823 0.82181 1.00491 1.86139 1.17137 1.26817 1.93470 1.18180 0.83524 1.00172 0.90420 1.21325 0.93545 1.07464 0.86134 1.98337 1.84100 1.95069 1.26677 1.20849 0.92129 1.01439 0.98592 1.21017 1.00038 1.00682 0.91625 1.21054 0.92587 0.98275 0.99197 1.19922 0.93986 0.97643 0.93742 1.20318 0.99212 0.98032 0.94272 1.20007 0.82873 0.89297 0.80146 1.90560 1.63832 1.46183 1.47371 1.43610 1.38505 1.09764 1.25687 1.18919 0.95378 1.10726 1.20488 0.88101 1.25208 0.97736 0.95533 0.94770 1.69749 1.21745 1.40538 1.17312 0.87044 0.82322 0.78523 0.82145 1.20287 1.21727 1.18478 1.21708 0.96283 0.85752 0.98226 1.22856 0.99894 0.95597 0.83910 1.88230 1.71552 1.49595 1.17988 1.22651 0.94656 0.94913 0.94270 0.91901 0.91055 0.90815 0.92616 0.93099 0.85099 0.85157 0.85146 0.88048 0.88718 0.91753 0.91104 0.89905 0.94125 0.93248 0.95272 0.94966 0.90109 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.07 10.28 37.16 0.38 -1.69 16 2 C 0.06 0.91 6.46 37.16 0.24 1.15 16 3 O -0.32 -5.84 8.73 -19.50 -0.17 -6.01 16 4 C 0.12 2.15 5.69 -39.19 -0.22 1.93 16 5 C -0.06 -0.89 6.33 -39.36 -0.25 -1.14 16 6 Cl -0.07 -1.00 28.21 -51.86 -1.46 -2.46 16 7 C -0.11 -1.47 9.83 -39.57 -0.39 -1.85 16 8 C -0.12 -1.46 10.04 -39.56 -0.40 -1.86 16 9 C -0.09 -1.38 9.67 -39.60 -0.38 -1.77 16 10 C -0.05 -0.91 4.39 -104.48 -0.46 -1.37 16 11 C -0.08 -1.53 4.26 -29.04 -0.12 -1.65 16 12 C 0.49 11.26 7.60 -10.99 -0.08 11.17 16 13 O -0.59 -14.84 15.69 5.55 0.09 -14.75 16 14 N -0.46 -10.95 2.19 -114.81 -0.25 -11.20 16 15 C -0.33 -8.40 8.54 -14.93 -0.13 -8.53 16 16 H 0.10 2.69 7.38 -52.49 -0.39 2.30 16 17 C 0.07 1.97 5.35 -17.46 -0.09 1.87 16 18 N -0.86 -23.59 13.96 55.50 0.77 -22.81 16 19 Si 0.87 20.64 24.82 -169.99 -4.22 16.42 16 20 H -0.28 -6.41 6.71 56.52 0.38 -6.03 16 21 H -0.29 -6.80 7.11 56.52 0.40 -6.39 16 22 H -0.26 -6.22 7.10 56.52 0.40 -5.82 16 23 C 0.10 2.35 4.57 -4.04 -0.02 2.33 16 24 C 0.06 1.12 6.28 37.16 0.23 1.36 16 25 O -0.36 -7.72 10.19 -35.23 -0.36 -8.07 16 26 C 0.03 0.53 11.01 101.05 1.11 1.64 16 27 H 0.06 0.83 8.14 -51.93 -0.42 0.41 16 28 H 0.07 1.12 8.14 -51.93 -0.42 0.70 16 29 H 0.07 0.80 8.14 -51.93 -0.42 0.38 16 30 H 0.06 0.79 7.66 -51.93 -0.40 0.39 16 31 H 0.05 0.67 7.87 -51.92 -0.41 0.26 16 32 H 0.13 1.37 8.06 -52.49 -0.42 0.95 16 33 H 0.13 1.22 8.06 -52.49 -0.42 0.80 16 34 H 0.13 1.72 8.06 -52.48 -0.42 1.30 16 35 H 0.10 1.99 6.83 -51.93 -0.35 1.63 16 36 H 0.09 1.70 7.71 -51.93 -0.40 1.30 16 37 H 0.27 7.06 8.31 -40.82 -0.34 6.72 16 38 H 0.07 1.67 2.95 -51.93 -0.15 1.51 16 39 H 0.08 1.82 7.51 -51.93 -0.39 1.43 16 40 H 0.04 0.71 8.14 -51.93 -0.42 0.28 16 41 H 0.05 1.01 8.14 -51.93 -0.42 0.59 16 42 H 0.03 0.41 8.14 -51.93 -0.42 -0.01 16 43 H 0.03 0.48 8.14 -51.93 -0.42 0.06 16 44 H 0.08 1.23 8.14 -51.93 -0.42 0.80 16 LS Contribution 380.54 15.07 5.73 5.73 Total: -1.00 -31.27 380.54 -6.75 -38.01 By element: Atomic # 1 Polarization: 9.86 SS G_CDS: -6.30 Total: 3.56 kcal Atomic # 6 Polarization: 2.17 SS G_CDS: -0.58 Total: 1.59 kcal Atomic # 7 Polarization: -34.53 SS G_CDS: 0.52 Total: -34.01 kcal Atomic # 8 Polarization: -28.40 SS G_CDS: -0.44 Total: -28.84 kcal Atomic # 14 Polarization: 20.64 SS G_CDS: -4.22 Total: 16.42 kcal Atomic # 17 Polarization: -1.00 SS G_CDS: -1.46 Total: -2.46 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -31.27 -6.75 -38.01 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000457206491.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.771 kcal (2) G-P(sol) polarization free energy of solvation -31.270 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.040 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.745 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.015 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.786 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds