Wall clock time and date at job start Sat Apr 11 2020 06:17:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.42903 * 113.99984 * 2 1 4 4 C 1.53004 * 109.47454 * 180.02562 * 3 2 1 5 5 N 1.46495 * 109.46986 * 64.99600 * 4 3 2 6 6 C 1.46496 * 120.00628 * 270.00225 * 5 4 3 7 7 C 1.50699 * 109.47598 * 270.00465 * 6 5 4 8 8 H 1.08005 * 119.99628 * 359.97438 * 7 6 5 9 9 C 1.37877 * 120.00538 * 179.97438 * 7 6 5 10 10 N 1.31507 * 120.00182 * 179.97438 * 9 7 6 11 11 Si 1.86802 * 119.99668 * 0.02562 * 9 7 6 12 12 H 1.48498 * 109.47170 * 89.99666 * 11 9 7 13 13 H 1.48495 * 109.46883 * 209.99839 * 11 9 7 14 14 H 1.48496 * 109.47123 * 329.99923 * 11 9 7 15 15 C 1.34774 * 119.99828 * 90.00387 * 5 4 3 16 16 O 1.21279 * 120.00472 * 179.97438 * 15 5 4 17 17 C 1.50706 * 120.00020 * 0.02562 * 15 5 4 18 18 C 1.50698 * 109.47294 * 180.02562 * 17 15 5 19 19 C 1.38172 * 120.01804 * 264.72735 * 18 17 15 20 20 C 1.38341 * 120.04210 * 179.72164 * 19 18 17 21 21 Cl 1.73595 * 119.96141 * 180.27272 * 20 19 18 22 22 C 1.38396 * 120.08196 * 0.55051 * 20 19 18 23 23 C 1.38121 * 120.04475 * 359.72353 * 22 20 19 24 24 C 1.38699 * 120.02422 * 84.99599 * 18 17 15 25 25 O 1.35919 * 120.04161 * 0.02562 * 24 18 17 26 26 C 1.42904 * 116.99992 * 179.97438 * 25 24 18 27 27 H 1.08996 * 109.47283 * 180.02562 * 1 2 3 28 28 H 1.09005 * 109.47304 * 300.00130 * 1 2 3 29 29 H 1.09002 * 109.47200 * 59.99688 * 1 2 3 30 30 H 1.09003 * 109.47458 * 60.00083 * 3 2 1 31 31 H 1.09002 * 109.47344 * 300.00334 * 3 2 1 32 32 H 1.09004 * 109.46898 * 305.00005 * 4 3 2 33 33 H 1.08993 * 109.47182 * 185.00344 * 4 3 2 34 34 H 1.09008 * 109.47096 * 29.99824 * 6 5 4 35 35 H 1.09003 * 109.47776 * 149.99700 * 6 5 4 36 36 H 0.97002 * 119.99991 * 180.02562 * 10 9 7 37 37 H 1.09001 * 109.46953 * 299.99667 * 17 15 5 38 38 H 1.09000 * 109.47318 * 59.99264 * 17 15 5 39 39 H 1.07997 * 119.97724 * 359.97438 * 19 18 17 40 40 H 1.07997 * 119.97548 * 179.70038 * 22 20 19 41 41 H 1.07994 * 120.02130 * 179.97438 * 23 22 20 42 42 H 1.09004 * 109.46786 * 60.00064 * 26 25 24 43 43 H 1.08997 * 109.46938 * 179.97438 * 26 25 24 44 44 H 1.08999 * 109.47315 * 300.00624 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0101 1.3055 0.0000 4 6 3.5354 1.1848 -0.0006 5 7 3.9756 0.5645 -1.2527 6 6 4.1052 -0.8919 -1.3428 7 6 5.5009 -1.2977 -0.9449 8 1 6.2197 -0.5458 -0.6544 9 6 5.8603 -2.6288 -0.9517 10 7 7.0785 -2.9828 -0.6050 11 14 4.6172 -3.9293 -1.4549 12 1 4.7026 -4.1550 -2.9201 13 1 4.9112 -5.1976 -0.7407 14 1 3.2498 -3.4689 -1.1039 15 6 4.2614 1.3338 -2.3217 16 8 4.6263 0.8204 -3.3582 17 6 4.1287 2.8321 -2.2290 18 6 4.5040 3.4524 -3.5501 19 6 5.7896 3.9151 -3.7562 20 6 6.1362 4.4794 -4.9707 21 17 7.7538 5.0535 -5.2298 22 6 5.1934 4.5920 -5.9776 23 6 3.9057 4.1359 -5.7734 24 6 3.5578 3.5644 -4.5580 25 8 2.2911 3.1153 -4.3550 26 6 1.3691 3.2635 -5.4367 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3634 0.5139 0.8900 29 1 -0.3634 0.5139 -0.8900 30 1 1.6886 1.8465 0.8900 31 1 1.6885 1.8465 -0.8900 32 1 3.8514 0.5683 0.8410 33 1 3.9784 2.1766 0.0890 34 1 3.3853 -1.3629 -0.6733 35 1 3.9119 -1.2114 -2.3669 36 1 7.3314 -3.9193 -0.6102 37 1 3.0982 3.0912 -1.9861 38 1 4.7912 3.2080 -1.4493 39 1 6.5253 3.8324 -2.9699 40 1 5.4646 5.0373 -6.9234 41 1 3.1702 4.2243 -6.5592 42 1 1.7376 2.7180 -6.3055 43 1 0.3978 2.8654 -5.1433 44 1 1.2689 4.3197 -5.6867 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000103214949.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:17:47 Heat of formation + Delta-G solvation = -91.981695 kcal Electronic energy + Delta-G solvation = -28160.555151 eV Core-core repulsion = 24104.928580 eV Total energy + Delta-G solvation = -4055.626571 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 341.123 amu Computer time = 1.52 seconds Orbital eigenvalues (eV) -40.49550 -39.02628 -37.74520 -37.49253 -36.18609 -34.85808 -33.02055 -32.37252 -30.08693 -29.81539 -28.55305 -27.44491 -26.67052 -25.99952 -22.83150 -22.63978 -22.26545 -21.34706 -18.53587 -17.99293 -16.90600 -16.82565 -16.60970 -16.29161 -16.03093 -15.75515 -15.48106 -15.11979 -14.81233 -14.57321 -14.27504 -13.98001 -13.74431 -13.36816 -13.22225 -12.92983 -12.51952 -12.36160 -12.30172 -12.09267 -11.96663 -11.87579 -11.73802 -11.55556 -11.35110 -11.25826 -10.93389 -10.78192 -10.73306 -10.69681 -10.33562 -10.01949 -9.51995 -9.42834 -9.17252 -8.78707 -8.47163 -8.08100 -7.60354 -5.98148 -3.95202 1.16994 1.21746 2.17616 3.16884 3.38476 3.43018 3.44010 3.48930 3.50524 3.93421 4.02853 4.51104 4.55935 4.65045 4.87793 5.00574 5.05468 5.08973 5.11972 5.21008 5.31453 5.34938 5.36880 5.38918 5.41196 5.46271 5.52272 5.59066 5.64257 5.67198 5.75377 5.86160 6.05650 6.11254 6.22052 6.25542 6.55190 6.99313 7.13479 7.24797 7.33776 7.46841 7.75691 8.37143 8.58456 9.03255 9.09528 9.63643 11.15410 Molecular weight = 341.12amu Principal moments of inertia in cm(-1) A = 0.009578 B = 0.003947 C = 0.003202 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2922.559836 B = 7091.649618 C = 8743.531603 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.375 6.375 3 C 0.042 3.958 4 C 0.111 3.889 5 N -0.586 5.586 6 C 0.221 3.779 7 C -0.525 4.525 8 H 0.073 0.927 9 C 0.072 3.928 10 N -0.901 5.901 11 Si 0.873 3.127 12 H -0.276 1.276 13 H -0.287 1.287 14 H -0.262 1.262 15 C 0.512 3.488 16 O -0.531 6.531 17 C -0.097 4.097 18 C -0.074 4.074 19 C -0.058 4.058 20 C -0.068 4.068 21 Cl -0.076 7.076 22 C -0.074 4.074 23 C -0.199 4.199 24 C 0.148 3.852 25 O -0.308 6.308 26 C 0.027 3.973 27 H 0.082 0.918 28 H 0.036 0.964 29 H 0.036 0.964 30 H 0.053 0.947 31 H 0.048 0.952 32 H 0.094 0.906 33 H 0.085 0.915 34 H 0.042 0.958 35 H 0.031 0.969 36 H 0.263 0.737 37 H 0.100 0.900 38 H 0.099 0.901 39 H 0.140 0.860 40 H 0.133 0.867 41 H 0.135 0.865 42 H 0.057 0.943 43 H 0.099 0.901 44 H 0.054 0.946 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.810 18.672 -5.110 23.213 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.293 6.293 3 C -0.036 4.036 4 C -0.013 4.013 5 N -0.317 5.317 6 C 0.101 3.899 7 C -0.563 4.563 8 H 0.091 0.909 9 C -0.130 4.130 10 N -0.540 5.540 11 Si 0.700 3.300 12 H -0.202 1.202 13 H -0.213 1.213 14 H -0.186 1.186 15 C 0.298 3.702 16 O -0.408 6.408 17 C -0.137 4.137 18 C -0.076 4.076 19 C -0.077 4.077 20 C -0.095 4.095 21 Cl -0.047 7.047 22 C -0.093 4.093 23 C -0.217 4.217 24 C 0.102 3.898 25 O -0.220 6.220 26 C -0.068 4.068 27 H 0.101 0.899 28 H 0.055 0.945 29 H 0.055 0.945 30 H 0.071 0.929 31 H 0.066 0.934 32 H 0.112 0.888 33 H 0.103 0.897 34 H 0.060 0.940 35 H 0.049 0.951 36 H 0.073 0.927 37 H 0.118 0.882 38 H 0.118 0.882 39 H 0.158 0.842 40 H 0.151 0.849 41 H 0.153 0.847 42 H 0.075 0.925 43 H 0.117 0.883 44 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -12.336 17.994 -5.490 22.497 hybrid contribution -0.635 -0.440 -0.509 0.925 sum -12.971 17.554 -5.999 22.636 Atomic orbital electron populations 1.22695 0.82026 1.02471 0.99277 1.88060 1.18770 1.27302 1.95188 1.23159 0.95340 0.85278 0.99777 1.21544 0.91080 0.99297 0.89423 1.47799 1.64981 1.08806 1.10117 1.19649 0.97547 0.75015 0.97739 1.21382 0.96198 0.93481 1.45258 0.90912 1.24818 0.95113 0.98334 0.94703 1.69901 1.18169 1.17142 1.48816 0.86884 0.82603 0.81366 0.79164 1.20150 1.21256 1.18633 1.20097 0.78166 0.87865 0.84038 1.90680 1.45988 1.74755 1.29356 1.20631 1.03885 0.94228 0.94996 1.18611 0.91889 1.01768 0.95296 1.20762 0.95084 0.95635 0.96229 1.20648 0.86678 1.05846 0.96343 1.98352 1.21897 1.87736 1.96746 1.20732 0.91722 0.98722 0.98152 1.21069 0.97724 1.05732 0.97219 1.18795 0.84534 0.93172 0.93253 1.86107 1.17994 1.77516 1.40416 1.23069 0.92470 1.01271 0.89981 0.89949 0.94538 0.94524 0.92889 0.93402 0.88755 0.89736 0.94026 0.95132 0.92748 0.88217 0.88240 0.84229 0.84941 0.84746 0.92468 0.88261 0.92727 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.38 11.01 101.05 1.11 1.49 16 2 O -0.37 -6.06 9.53 -35.23 -0.34 -6.40 16 3 C 0.04 0.57 6.28 37.16 0.23 0.80 16 4 C 0.11 1.74 5.62 -4.04 -0.02 1.71 16 5 N -0.59 -12.24 2.42 -175.06 -0.42 -12.66 16 6 C 0.22 5.63 4.05 -5.20 -0.02 5.61 16 7 C -0.52 -15.47 9.94 -34.44 -0.34 -15.81 16 8 H 0.07 2.32 8.06 -52.48 -0.42 1.90 16 9 C 0.07 2.16 5.47 -17.82 -0.10 2.07 16 10 N -0.90 -28.49 13.96 55.43 0.77 -27.72 16 11 Si 0.87 22.48 27.47 -169.99 -4.67 17.81 16 12 H -0.28 -7.15 7.11 56.52 0.40 -6.75 16 13 H -0.29 -7.20 7.11 56.52 0.40 -6.80 16 14 H -0.26 -6.44 6.54 56.52 0.37 -6.07 16 15 C 0.51 10.57 7.67 -10.98 -0.08 10.48 16 16 O -0.53 -13.46 15.61 5.56 0.09 -13.37 16 17 C -0.10 -1.44 4.11 -29.03 -0.12 -1.56 16 18 C -0.07 -1.12 4.39 -104.48 -0.46 -1.58 16 19 C -0.06 -0.84 9.46 -39.57 -0.37 -1.22 16 20 C -0.07 -0.92 6.32 -39.49 -0.25 -1.17 16 21 Cl -0.08 -0.95 28.95 -51.86 -1.50 -2.45 16 22 C -0.07 -0.89 9.82 -39.57 -0.39 -1.28 16 23 C -0.20 -2.37 9.04 -39.44 -0.36 -2.73 16 24 C 0.15 2.10 6.66 -39.22 -0.26 1.84 16 25 O -0.31 -4.14 9.63 -19.49 -0.19 -4.33 16 26 C 0.03 0.24 9.81 101.05 0.99 1.23 16 27 H 0.08 0.92 8.14 -51.93 -0.42 0.50 16 28 H 0.04 0.35 8.14 -51.93 -0.42 -0.07 16 29 H 0.04 0.39 8.14 -51.93 -0.42 -0.03 16 30 H 0.05 0.55 8.14 -51.93 -0.42 0.12 16 31 H 0.05 0.61 7.30 -51.93 -0.38 0.23 16 32 H 0.09 1.59 8.07 -51.93 -0.42 1.17 16 33 H 0.08 1.02 6.44 -51.93 -0.33 0.68 16 34 H 0.04 1.05 6.17 -51.92 -0.32 0.73 16 35 H 0.03 0.85 6.85 -51.93 -0.36 0.49 16 36 H 0.26 7.78 8.31 -40.82 -0.34 7.44 16 37 H 0.10 1.26 6.81 -51.93 -0.35 0.91 16 38 H 0.10 1.22 7.31 -51.93 -0.38 0.84 16 39 H 0.14 1.88 8.06 -52.49 -0.42 1.46 16 40 H 0.13 1.25 8.06 -52.49 -0.42 0.83 16 41 H 0.13 1.21 6.30 -52.49 -0.33 0.88 16 42 H 0.06 0.50 7.66 -51.93 -0.40 0.10 16 43 H 0.10 0.70 8.14 -51.93 -0.42 0.28 16 44 H 0.05 0.36 7.66 -51.93 -0.40 -0.03 16 LS Contribution 381.72 15.07 5.75 5.75 Total: -1.00 -37.51 381.72 -7.16 -44.67 By element: Atomic # 1 Polarization: 5.03 SS G_CDS: -6.22 Total: -1.19 kcal Atomic # 6 Polarization: 0.34 SS G_CDS: -0.44 Total: -0.10 kcal Atomic # 7 Polarization: -40.73 SS G_CDS: 0.35 Total: -40.38 kcal Atomic # 8 Polarization: -23.67 SS G_CDS: -0.44 Total: -24.10 kcal Atomic # 14 Polarization: 22.48 SS G_CDS: -4.67 Total: 17.81 kcal Atomic # 17 Polarization: -0.95 SS G_CDS: -1.50 Total: -2.45 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -37.51 -7.16 -44.67 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000103214949.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.315 kcal (2) G-P(sol) polarization free energy of solvation -37.506 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.822 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.160 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.666 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.982 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.52 seconds