Wall clock time and date at job start Sat Apr 11 2020 06:18:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 N 1.30214 * 126.79098 * 2 1 4 4 O 1.20914 * 111.64617 * 180.28607 * 3 2 1 5 5 C 1.34071 * 111.55371 * 359.69720 * 4 3 2 6 6 Cl 1.73602 * 126.79756 * 180.02562 * 5 4 3 7 7 C 1.35674 * 106.40397 * 0.02562 * 5 4 3 8 8 C 1.50699 * 128.01346 * 180.02562 * 7 5 4 9 9 C 1.53005 * 109.47054 * 90.01871 * 8 7 5 10 10 C 1.50699 * 109.47054 * 179.97438 * 9 8 7 11 11 O 1.21283 * 119.99828 * 0.02562 * 10 9 8 12 12 N 1.34777 * 120.00127 * 180.02562 * 10 9 8 13 13 C 1.46493 * 120.00113 * 180.02562 * 12 10 9 14 14 C 1.53039 * 109.46134 * 275.02623 * 13 12 10 15 15 C 1.53190 * 109.31578 * 178.60093 * 14 13 12 16 16 N 1.46924 * 108.76777 * 54.65535 * 15 14 13 17 17 C 1.36937 * 120.63726 * 126.40369 * 16 15 14 18 18 H 1.08003 * 119.99247 * 331.83767 * 17 16 15 19 19 C 1.38808 * 120.00319 * 151.82896 * 17 16 15 20 20 N 1.31618 * 119.99879 * 343.06947 * 19 17 16 21 21 Si 1.86796 * 119.99897 * 163.07501 * 19 17 16 22 22 H 1.48507 * 109.47529 * 359.97438 * 21 19 17 23 23 H 1.48500 * 109.47388 * 119.99892 * 21 19 17 24 24 H 1.48511 * 109.47027 * 239.99921 * 21 19 17 25 25 C 1.46932 * 118.73684 * 306.38811 * 16 15 14 26 26 C 1.53039 * 109.46188 * 154.97080 * 13 12 10 27 27 H 1.09006 * 109.47302 * 270.20617 * 1 2 3 28 28 H 1.09009 * 109.47015 * 30.20285 * 1 2 3 29 29 H 1.08998 * 109.47605 * 150.20381 * 1 2 3 30 30 H 1.08999 * 109.47283 * 330.02458 * 8 7 5 31 31 H 1.08995 * 109.47235 * 210.01806 * 8 7 5 32 32 H 1.09000 * 109.47098 * 60.00316 * 9 8 7 33 33 H 1.08997 * 109.47535 * 299.99877 * 9 8 7 34 34 H 0.97000 * 120.00132 * 359.97438 * 12 10 9 35 35 H 1.09004 * 109.46197 * 34.99575 * 13 12 10 36 36 H 1.09000 * 109.49810 * 298.56826 * 14 13 12 37 37 H 1.09000 * 109.50082 * 58.66000 * 14 13 12 38 38 H 1.09000 * 109.60155 * 294.86605 * 15 14 13 39 39 H 1.09000 * 109.70652 * 174.50217 * 15 14 13 40 40 H 0.97004 * 119.99630 * 179.97438 * 20 19 17 41 41 H 1.09004 * 109.58549 * 293.81385 * 25 16 15 42 42 H 1.08994 * 109.70387 * 173.46645 * 25 16 15 43 43 H 1.09001 * 109.49945 * 301.33811 * 26 13 12 44 44 H 1.09004 * 109.49566 * 61.40382 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2868 1.0428 0.0000 4 8 3.4539 0.7269 -0.0056 5 6 3.6036 -0.6054 -0.0036 6 17 5.1011 -1.4836 -0.0092 7 6 2.3530 -1.1315 0.0037 8 6 1.9579 -2.5857 0.0091 9 6 1.8306 -3.0742 1.4535 10 6 1.4349 -4.5283 1.4590 11 8 1.2713 -5.1162 0.4109 12 7 1.2628 -5.1755 2.6286 13 6 0.8787 -6.5891 2.6339 14 6 -0.6426 -6.7046 2.5138 15 6 -1.0377 -8.1844 2.4845 16 7 -0.4741 -8.8476 3.6682 17 6 -1.2761 -9.5680 4.5126 18 1 -2.3207 -9.3128 4.6138 19 6 -0.7467 -10.6262 5.2384 20 7 0.4072 -11.1530 4.8871 21 14 -1.6720 -11.3026 6.7134 22 1 -2.9339 -10.5418 6.8977 23 1 -1.9865 -12.7360 6.4857 24 1 -0.8309 -11.1675 7.9298 25 6 0.9666 -8.7236 3.9286 26 6 1.3393 -7.2378 3.9413 27 1 -0.3634 0.0037 1.0277 28 1 -0.3633 0.8882 -0.5170 29 1 -0.3634 -0.8918 -0.5106 30 1 2.7193 -3.1711 -0.5065 31 1 1.0016 -2.7043 -0.5001 32 1 1.0693 -2.4889 1.9692 33 1 2.7870 -2.9557 1.9628 34 1 1.3940 -4.7054 3.4669 35 1 1.3490 -7.0964 1.7915 36 1 -1.1129 -6.2191 3.3689 37 1 -0.9726 -6.2219 1.5940 38 1 -0.6428 -8.6505 1.5818 39 1 -2.1238 -8.2751 2.4974 40 1 0.7773 -11.8923 5.3945 41 1 1.5250 -9.2337 3.1437 42 1 1.2051 -9.1685 4.8946 43 1 2.4201 -7.1346 4.0377 44 1 0.8505 -6.7468 4.7829 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000609332779.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:18:12 Heat of formation + Delta-G solvation = 28.696104 kcal Electronic energy + Delta-G solvation = -26942.383958 eV Core-core repulsion = 22924.283120 eV Total energy + Delta-G solvation = -4018.100838 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 341.129 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -45.47747 -39.83997 -37.69117 -37.45647 -36.16489 -34.45154 -33.50349 -32.20287 -31.01700 -30.11880 -29.39634 -29.13706 -26.02310 -24.63691 -22.39408 -22.15668 -21.89652 -21.42582 -20.17426 -19.27456 -18.28335 -18.11352 -17.20531 -16.59848 -16.07320 -15.79512 -15.32941 -14.81097 -14.36731 -14.03162 -13.84819 -13.68725 -13.58574 -13.34766 -13.32519 -13.09046 -12.99924 -12.90848 -12.64010 -12.50363 -12.33688 -12.18873 -11.58005 -11.49011 -11.16392 -11.15606 -10.88708 -10.75864 -10.50638 -10.38486 -10.30192 -10.06260 -9.92344 -9.76234 -9.64326 -9.42810 -8.74966 -8.48663 -6.71100 -5.82172 -3.24511 0.65636 0.77147 1.61777 2.72014 3.12843 3.33172 3.36364 3.43044 3.45131 3.61691 4.12438 4.37064 4.47162 4.52983 4.69612 4.90151 4.95837 5.07719 5.16707 5.23180 5.30322 5.31867 5.41897 5.48348 5.55938 5.57577 5.66987 5.83183 5.84788 6.04533 6.24063 6.30830 6.50044 6.52126 6.56430 6.76836 6.88192 6.96447 7.28721 7.56397 7.63346 7.68435 7.77747 8.34371 8.42018 9.18155 9.81334 10.38274 11.26760 Molecular weight = 341.13amu Principal moments of inertia in cm(-1) A = 0.024566 B = 0.001998 C = 0.001920 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1139.515562 B =14009.615502 C =14576.442346 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 C 0.034 3.966 3 N -0.348 5.348 4 O 0.109 5.891 5 C -0.001 4.001 6 Cl 0.051 6.949 7 C -0.163 4.163 8 C -0.030 4.030 9 C -0.137 4.137 10 C 0.510 3.490 11 O -0.542 6.542 12 N -0.724 5.724 13 C 0.150 3.850 14 C -0.138 4.138 15 C 0.147 3.853 16 N -0.593 5.593 17 C -0.251 4.251 18 H 0.066 0.934 19 C 0.001 3.999 20 N -0.903 5.903 21 Si 0.902 3.098 22 H -0.278 1.278 23 H -0.290 1.290 24 H -0.289 1.289 25 C 0.174 3.826 26 C -0.147 4.147 27 H 0.086 0.914 28 H 0.080 0.920 29 H 0.088 0.912 30 H 0.091 0.909 31 H 0.093 0.907 32 H 0.094 0.906 33 H 0.093 0.907 34 H 0.396 0.604 35 H 0.082 0.918 36 H 0.057 0.943 37 H 0.054 0.946 38 H 0.020 0.980 39 H 0.056 0.944 40 H 0.254 0.746 41 H 0.021 0.979 42 H 0.091 0.909 43 H 0.054 0.946 44 H 0.059 0.941 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.226 22.879 -8.004 25.026 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.137 4.137 2 C -0.124 4.124 3 N -0.054 5.054 4 O 0.042 5.958 5 C -0.091 4.091 6 Cl 0.080 6.920 7 C -0.168 4.168 8 C -0.068 4.068 9 C -0.177 4.177 10 C 0.296 3.704 11 O -0.419 6.419 12 N -0.374 5.374 13 C 0.047 3.953 14 C -0.178 4.178 15 C 0.020 3.980 16 N -0.316 5.316 17 C -0.381 4.381 18 H 0.084 0.916 19 C -0.197 4.197 20 N -0.548 5.548 21 Si 0.732 3.268 22 H -0.203 1.203 23 H -0.217 1.217 24 H -0.216 1.216 25 C 0.047 3.953 26 C -0.186 4.186 27 H 0.104 0.896 28 H 0.099 0.901 29 H 0.107 0.893 30 H 0.109 0.891 31 H 0.112 0.888 32 H 0.112 0.888 33 H 0.111 0.889 34 H 0.229 0.771 35 H 0.100 0.900 36 H 0.076 0.924 37 H 0.072 0.928 38 H 0.038 0.962 39 H 0.074 0.926 40 H 0.064 0.936 41 H 0.039 0.961 42 H 0.110 0.890 43 H 0.072 0.928 44 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges 6.093 23.523 -8.679 25.803 hybrid contribution -0.039 -0.933 1.253 1.563 sum 6.054 22.590 -7.426 24.538 Atomic orbital electron populations 1.20268 0.85036 1.04399 1.04003 1.23389 0.99251 0.87806 1.01978 1.73958 0.88551 1.22994 1.19899 1.84918 1.22107 1.20758 1.68021 1.24641 0.91178 0.84907 1.08382 1.98473 1.28090 1.68814 1.96672 1.20922 0.89766 0.98441 1.07677 1.19711 1.04274 0.86363 0.96415 1.21641 1.03928 0.93856 0.98308 1.20465 0.77132 0.88629 0.84160 1.90715 1.51126 1.68664 1.31427 1.46365 1.69930 1.13057 1.08018 1.21050 0.95537 0.79035 0.99708 1.22362 0.94932 0.99962 1.00573 1.20874 0.97317 0.89583 0.90209 1.44101 1.04461 1.58483 1.24528 1.19228 0.93557 1.07821 1.17493 0.91603 1.25060 0.97773 0.96056 1.00835 1.70036 1.20082 1.25149 1.39483 0.86230 0.79230 0.78530 0.82821 1.20261 1.21706 1.21569 1.20738 0.84113 0.88413 1.01987 1.22533 0.99312 1.01379 0.95418 0.89577 0.90121 0.89329 0.89087 0.88846 0.88761 0.88870 0.77079 0.90026 0.92379 0.92758 0.96201 0.92570 0.93641 0.96123 0.89044 0.92775 0.92198 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.48 10.39 36.00 0.37 -0.11 16 2 C 0.03 0.30 7.32 -82.12 -0.60 -0.30 16 3 N -0.35 -3.62 12.07 33.43 0.40 -3.22 16 4 O 0.11 1.09 11.20 17.10 0.19 1.28 16 5 C 0.00 -0.01 8.12 29.81 0.24 0.23 16 6 Cl 0.05 0.39 29.23 -51.86 -1.52 -1.12 16 7 C -0.16 -1.41 5.58 -104.38 -0.58 -1.99 16 8 C -0.03 -0.26 4.90 -27.88 -0.14 -0.39 16 9 C -0.14 -1.15 5.68 -27.88 -0.16 -1.31 16 10 C 0.51 6.42 7.79 -10.99 -0.09 6.33 16 11 O -0.54 -8.96 15.64 5.55 0.09 -8.87 16 12 N -0.72 -9.16 5.08 -53.77 -0.27 -9.43 16 13 C 0.15 2.48 2.42 -67.89 -0.16 2.31 16 14 C -0.14 -2.42 5.65 -26.61 -0.15 -2.57 16 15 C 0.15 3.10 6.52 -3.71 -0.02 3.07 16 16 N -0.59 -14.55 2.99 -172.32 -0.52 -15.07 16 17 C -0.25 -6.77 9.58 -15.06 -0.14 -6.92 16 18 H 0.07 1.75 7.89 -52.48 -0.41 1.34 16 19 C 0.00 0.03 4.92 -17.43 -0.09 -0.05 16 20 N -0.90 -25.78 11.19 55.49 0.62 -25.16 16 21 Si 0.90 21.29 29.59 -169.99 -5.03 16.27 16 22 H -0.28 -6.40 7.11 56.52 0.40 -6.00 16 23 H -0.29 -6.94 7.11 56.52 0.40 -6.54 16 24 H -0.29 -6.82 7.11 56.52 0.40 -6.42 16 25 C 0.17 4.00 5.30 -3.71 -0.02 3.98 16 26 C -0.15 -2.58 5.55 -26.61 -0.15 -2.73 16 27 H 0.09 0.43 8.14 -51.93 -0.42 0.01 16 28 H 0.08 0.44 8.14 -51.92 -0.42 0.02 16 29 H 0.09 0.45 7.65 -51.93 -0.40 0.06 16 30 H 0.09 0.86 8.10 -51.93 -0.42 0.44 16 31 H 0.09 0.82 7.61 -51.93 -0.39 0.42 16 32 H 0.09 0.64 8.14 -51.93 -0.42 0.21 16 33 H 0.09 0.67 8.14 -51.93 -0.42 0.25 16 34 H 0.40 3.93 8.60 -40.82 -0.35 3.57 16 35 H 0.08 1.54 7.58 -51.93 -0.39 1.14 16 36 H 0.06 1.01 8.14 -51.93 -0.42 0.59 16 37 H 0.05 0.92 8.14 -51.93 -0.42 0.50 16 38 H 0.02 0.44 8.14 -51.93 -0.42 0.01 16 39 H 0.06 1.16 7.93 -51.93 -0.41 0.74 16 40 H 0.25 6.98 8.31 -40.82 -0.34 6.64 16 41 H 0.02 0.51 8.14 -51.93 -0.42 0.08 16 42 H 0.09 2.35 6.06 -51.93 -0.31 2.03 16 43 H 0.05 0.85 8.14 -51.93 -0.42 0.43 16 44 H 0.06 1.04 8.14 -51.93 -0.42 0.62 16 LS Contribution 379.18 15.07 5.71 5.71 Total: -1.00 -31.44 379.18 -8.46 -39.90 By element: Atomic # 1 Polarization: 6.61 SS G_CDS: -6.46 Total: 0.15 kcal Atomic # 6 Polarization: 1.25 SS G_CDS: -1.68 Total: -0.43 kcal Atomic # 7 Polarization: -53.12 SS G_CDS: 0.24 Total: -52.89 kcal Atomic # 8 Polarization: -7.87 SS G_CDS: 0.28 Total: -7.59 kcal Atomic # 14 Polarization: 21.29 SS G_CDS: -5.03 Total: 16.27 kcal Atomic # 17 Polarization: 0.39 SS G_CDS: -1.52 Total: -1.12 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -31.44 -8.46 -39.90 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000609332779.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.595 kcal (2) G-P(sol) polarization free energy of solvation -31.437 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.157 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.461 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.899 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.696 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds