Wall clock time and date at job start Sat Apr 11 2020 06:17:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 N 1.30206 * 126.78728 * 2 1 4 4 O 1.20916 * 111.64499 * 180.29319 * 3 2 1 5 5 C 1.34061 * 111.55233 * 359.70052 * 4 3 2 6 6 Cl 1.73602 * 126.79678 * 180.02562 * 5 4 3 7 7 C 1.35672 * 106.40794 * 0.02562 * 5 4 3 8 8 C 1.50699 * 128.01541 * 179.97438 * 7 5 4 9 9 C 1.50704 * 109.46782 * 90.02798 * 8 7 5 10 10 O 1.21273 * 120.00021 * 0.02562 * 9 8 7 11 11 N 1.34781 * 120.00025 * 179.97438 * 9 8 7 12 12 C 1.46497 * 120.00049 * 179.97438 * 11 9 8 13 13 H 1.09001 * 109.52235 * 35.08516 * 12 11 9 14 14 C 1.53184 * 109.49871 * 275.00509 * 12 11 9 15 15 N 1.46928 * 108.89534 * 294.75130 * 14 12 11 16 16 C 1.36938 * 120.62940 * 126.29555 * 15 14 12 17 17 H 1.08005 * 120.00173 * 331.84410 * 16 15 14 18 18 C 1.38813 * 119.99936 * 151.83773 * 16 15 14 19 19 N 1.31618 * 120.00004 * 343.08512 * 18 16 15 20 20 Si 1.86806 * 119.99953 * 163.08402 * 18 16 15 21 21 H 1.48496 * 109.47191 * 90.00149 * 20 18 16 22 22 H 1.48501 * 109.46981 * 210.00196 * 20 18 16 23 23 H 1.48500 * 109.46794 * 329.99854 * 20 18 16 24 24 C 1.46926 * 118.73918 * 306.32538 * 15 14 12 25 25 C 1.53187 * 108.77400 * 53.60455 * 24 15 14 26 26 C 1.53035 * 109.31581 * 305.36470 * 25 24 15 27 27 H 1.09006 * 109.46024 * 301.34597 * 26 25 24 28 28 C 1.53000 * 109.46319 * 181.38935 * 26 25 24 29 29 H 1.09007 * 109.46879 * 270.19445 * 1 2 3 30 30 H 1.08994 * 109.47529 * 30.19910 * 1 2 3 31 31 H 1.09000 * 109.47202 * 150.19954 * 1 2 3 32 32 H 1.09002 * 109.47580 * 330.03211 * 8 7 5 33 33 H 1.08999 * 109.47301 * 210.03131 * 8 7 5 34 34 H 0.97002 * 119.99704 * 0.02562 * 11 9 8 35 35 H 1.09007 * 109.58839 * 174.89594 * 14 12 11 36 36 H 1.09003 * 109.58796 * 54.61516 * 14 12 11 37 37 H 0.96996 * 119.99787 * 179.97438 * 19 18 16 38 38 H 1.09002 * 109.58094 * 173.39220 * 24 15 14 39 39 H 1.09000 * 109.58537 * 293.67095 * 24 15 14 40 40 H 1.09006 * 109.49965 * 65.32155 * 25 24 15 41 41 H 1.08999 * 109.49865 * 185.37785 * 25 24 15 42 42 H 1.09000 * 109.47364 * 59.99659 * 28 26 25 43 43 H 1.09003 * 109.47208 * 179.97438 * 28 26 25 44 44 H 1.09001 * 109.46862 * 299.99785 * 28 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2868 1.0428 0.0000 4 8 3.4539 0.7269 -0.0058 5 6 3.6036 -0.6053 -0.0039 6 17 5.1012 -1.4834 -0.0098 7 6 2.3531 -1.1315 0.0034 8 6 1.9581 -2.5857 0.0076 9 6 1.8331 -3.0681 1.4299 10 8 2.0436 -2.3059 2.3494 11 7 1.4865 -4.3463 1.6800 12 6 1.3655 -4.8154 3.0626 13 1 0.9753 -4.0117 3.6871 14 6 2.7427 -5.2422 3.5800 15 7 3.1994 -6.4081 2.8114 16 6 4.4202 -6.4002 2.1911 17 1 4.8532 -5.4668 1.8629 18 6 5.1014 -7.5919 1.9843 19 7 4.7599 -8.6704 2.6570 20 14 6.5027 -7.6649 0.7512 21 1 7.7808 -7.3413 1.4346 22 1 6.5825 -9.0303 0.1728 23 1 6.2587 -6.6811 -0.3341 24 6 2.3211 -7.5824 2.7203 25 6 0.9479 -7.1327 2.2116 26 6 0.4144 -6.0172 3.1133 27 1 0.3443 -6.3812 4.1384 28 6 -0.9723 -5.5893 2.6288 29 1 -0.3633 0.0035 1.0277 30 1 -0.3634 0.8881 -0.5169 31 1 -0.3633 -0.8918 -0.5107 32 1 2.7193 -3.1706 -0.5088 33 1 1.0016 -2.7040 -0.5015 34 1 1.3177 -4.9558 0.9445 35 1 2.6711 -5.5056 4.6354 36 1 3.4501 -4.4223 3.4553 37 1 5.2356 -9.5032 2.5122 38 1 2.7490 -8.3058 2.0263 39 1 2.2171 -8.0381 3.7050 40 1 1.0416 -6.7619 1.1908 41 1 0.2587 -7.9769 2.2300 42 1 -1.6497 -6.4424 2.6666 43 1 -1.3526 -4.7951 3.2712 44 1 -0.9027 -5.2258 1.6035 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000968417893.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:17:54 Heat of formation + Delta-G solvation = 36.920174 kcal Electronic energy + Delta-G solvation = -28740.183451 eV Core-core repulsion = 24722.439236 eV Total energy + Delta-G solvation = -4017.744215 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 341.129 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -45.11577 -39.78803 -37.76895 -37.19169 -35.38024 -34.23578 -32.81654 -32.41666 -31.11343 -29.78210 -28.98854 -28.35301 -27.14826 -24.12183 -22.80895 -21.98531 -21.54491 -21.13582 -20.35650 -18.73753 -17.99718 -17.79198 -17.01504 -16.50079 -15.82476 -15.26329 -14.93752 -14.72013 -14.04908 -13.94633 -13.79069 -13.56178 -13.47186 -13.32164 -13.17933 -13.01380 -12.86770 -12.58657 -12.41358 -12.18999 -12.02491 -11.84086 -11.63499 -11.43725 -11.18127 -10.97118 -10.87655 -10.76550 -10.40203 -10.29479 -10.13340 -9.99409 -9.68575 -9.59497 -9.50731 -9.17741 -8.67295 -8.39785 -6.66811 -5.81874 -3.23614 1.02506 1.17425 1.95606 2.95623 3.33421 3.41236 3.41516 3.45436 3.66968 3.92185 4.41982 4.46215 4.67661 4.79852 5.05579 5.18611 5.25422 5.26079 5.30605 5.32716 5.39089 5.42360 5.50280 5.52820 5.56162 5.85501 5.89219 5.92294 5.99541 6.16265 6.19254 6.37547 6.40073 6.55052 6.61452 6.77449 6.82696 7.05259 7.29068 7.60698 7.77377 7.92135 7.96775 8.42266 8.59326 9.19044 9.81966 10.38894 11.26492 Molecular weight = 341.13amu Principal moments of inertia in cm(-1) A = 0.010677 B = 0.004514 C = 0.003374 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2621.904573 B = 6201.904656 C = 8295.989938 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 C 0.043 3.957 3 N -0.352 5.352 4 O 0.106 5.894 5 C 0.013 3.987 6 Cl 0.057 6.943 7 C -0.146 4.146 8 C -0.070 4.070 9 C 0.516 3.484 10 O -0.543 6.543 11 N -0.698 5.698 12 C 0.137 3.863 13 H 0.077 0.923 14 C 0.134 3.866 15 N -0.586 5.586 16 C -0.245 4.245 17 H 0.062 0.938 18 C 0.004 3.996 19 N -0.902 5.902 20 Si 0.896 3.104 21 H -0.287 1.287 22 H -0.290 1.290 23 H -0.280 1.280 24 C 0.168 3.832 25 C -0.136 4.136 26 C -0.094 4.094 27 H 0.077 0.923 28 C -0.143 4.143 29 H 0.085 0.915 30 H 0.078 0.922 31 H 0.083 0.917 32 H 0.112 0.888 33 H 0.108 0.892 34 H 0.399 0.601 35 H 0.024 0.976 36 H 0.059 0.941 37 H 0.253 0.747 38 H 0.087 0.913 39 H 0.018 0.982 40 H 0.051 0.949 41 H 0.052 0.948 42 H 0.051 0.949 43 H 0.048 0.952 44 H 0.050 0.950 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.613 10.625 -7.107 16.614 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C -0.116 4.116 3 N -0.059 5.059 4 O 0.041 5.959 5 C -0.077 4.077 6 Cl 0.085 6.915 7 C -0.151 4.151 8 C -0.111 4.111 9 C 0.301 3.699 10 O -0.421 6.421 11 N -0.349 5.349 12 C 0.031 3.969 13 H 0.095 0.905 14 C 0.007 3.993 15 N -0.308 5.308 16 C -0.375 4.375 17 H 0.080 0.920 18 C -0.195 4.195 19 N -0.547 5.547 20 Si 0.726 3.274 21 H -0.214 1.214 22 H -0.216 1.216 23 H -0.206 1.206 24 C 0.042 3.958 25 C -0.175 4.175 26 C -0.113 4.113 27 H 0.095 0.905 28 C -0.201 4.201 29 H 0.104 0.896 30 H 0.097 0.903 31 H 0.101 0.899 32 H 0.130 0.870 33 H 0.126 0.874 34 H 0.235 0.765 35 H 0.042 0.958 36 H 0.077 0.923 37 H 0.063 0.937 38 H 0.106 0.894 39 H 0.036 0.964 40 H 0.070 0.930 41 H 0.071 0.929 42 H 0.070 0.930 43 H 0.067 0.933 44 H 0.069 0.931 Dipole moment (debyes) X Y Z Total from point charges -10.442 12.223 -6.439 17.318 hybrid contribution 1.013 -1.395 -0.886 1.938 sum -9.429 10.829 -7.325 16.119 Atomic orbital electron populations 1.20202 0.85408 1.03742 1.03924 1.23204 0.98959 0.87843 1.01610 1.73884 0.88558 1.22965 1.20517 1.84878 1.22073 1.20723 1.68259 1.24573 0.91376 0.84763 1.06969 1.98493 1.27901 1.68571 1.96543 1.20091 0.90056 0.96819 1.08148 1.19999 1.04715 0.89605 0.96734 1.20102 0.77116 0.82392 0.90268 1.90691 1.49939 1.55280 1.46148 1.45843 1.69128 1.10464 1.09417 1.21597 0.97940 0.95114 0.82294 0.90489 1.21286 0.92913 0.91485 0.93636 1.43979 1.16411 1.12613 1.57842 1.19101 0.94951 0.93121 1.30352 0.92000 1.25003 0.97785 0.97137 0.99564 1.70023 1.42891 1.00984 1.40790 0.86394 0.82564 0.76894 0.81523 1.21448 1.21576 1.20563 1.20800 0.86016 0.89902 0.99036 1.22248 1.00115 0.96736 0.98425 1.21371 0.93496 0.95618 1.00808 0.90498 1.21844 0.96755 1.00580 1.00901 0.89629 0.90299 0.89867 0.87034 0.87372 0.76528 0.95780 0.92285 0.93698 0.89449 0.96395 0.93017 0.92931 0.93035 0.93307 0.93072 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.68 10.39 36.01 0.37 -0.30 16 2 C 0.04 0.55 7.32 -82.12 -0.60 -0.06 16 3 N -0.35 -5.06 12.07 33.43 0.40 -4.66 16 4 O 0.11 1.54 11.20 17.12 0.19 1.73 16 5 C 0.01 0.19 8.12 29.81 0.24 0.43 16 6 Cl 0.06 0.77 29.23 -51.86 -1.52 -0.75 16 7 C -0.15 -1.94 4.82 -104.39 -0.50 -2.45 16 8 C -0.07 -0.83 6.10 -29.03 -0.18 -1.01 16 9 C 0.52 7.91 7.79 -10.98 -0.09 7.83 16 10 O -0.54 -10.32 15.70 5.56 0.09 -10.23 16 11 N -0.70 -10.40 4.26 -53.54 -0.23 -10.63 16 12 C 0.14 2.24 2.26 -67.66 -0.15 2.09 16 13 H 0.08 1.29 7.58 -51.93 -0.39 0.90 16 14 C 0.13 2.78 6.10 -3.71 -0.02 2.75 16 15 N -0.59 -13.62 2.91 -172.32 -0.50 -14.13 16 16 C -0.25 -6.41 9.58 -15.06 -0.14 -6.55 16 17 H 0.06 1.64 7.89 -52.48 -0.41 1.22 16 18 C 0.00 0.09 4.92 -17.43 -0.09 0.01 16 19 N -0.90 -25.26 11.20 55.49 0.62 -24.64 16 20 Si 0.90 21.07 29.59 -169.99 -5.03 16.04 16 21 H -0.29 -6.88 7.11 56.52 0.40 -6.48 16 22 H -0.29 -6.85 7.11 56.52 0.40 -6.45 16 23 H -0.28 -6.41 7.11 56.52 0.40 -6.01 16 24 C 0.17 3.67 5.30 -3.71 -0.02 3.65 16 25 C -0.14 -2.22 5.20 -26.62 -0.14 -2.35 16 26 C -0.09 -1.37 2.48 -90.42 -0.22 -1.60 16 27 H 0.08 1.16 8.14 -51.93 -0.42 0.74 16 28 C -0.14 -1.67 9.05 37.16 0.34 -1.34 16 29 H 0.09 0.78 8.14 -51.93 -0.42 0.36 16 30 H 0.08 0.61 8.14 -51.93 -0.42 0.18 16 31 H 0.08 0.57 7.65 -51.93 -0.40 0.17 16 32 H 0.11 1.27 8.14 -51.93 -0.42 0.84 16 33 H 0.11 0.90 7.65 -51.93 -0.40 0.50 16 34 H 0.40 5.43 6.64 -40.82 -0.27 5.16 16 35 H 0.02 0.51 8.14 -51.93 -0.42 0.09 16 36 H 0.06 1.33 7.93 -51.93 -0.41 0.92 16 37 H 0.25 6.90 8.31 -40.82 -0.34 6.57 16 38 H 0.09 2.16 6.06 -51.93 -0.31 1.85 16 39 H 0.02 0.42 8.14 -51.93 -0.42 0.00 16 40 H 0.05 0.81 6.41 -51.93 -0.33 0.48 16 41 H 0.05 0.78 8.14 -51.93 -0.42 0.36 16 42 H 0.05 0.55 8.14 -51.93 -0.42 0.13 16 43 H 0.05 0.55 8.14 -51.93 -0.42 0.13 16 44 H 0.05 0.56 7.55 -51.93 -0.39 0.17 16 LS Contribution 373.86 15.07 5.63 5.63 Total: -1.00 -30.89 373.86 -7.80 -38.70 By element: Atomic # 1 Polarization: 8.09 SS G_CDS: -6.26 Total: 1.83 kcal Atomic # 6 Polarization: 2.30 SS G_CDS: -1.20 Total: 1.09 kcal Atomic # 7 Polarization: -54.34 SS G_CDS: 0.29 Total: -54.05 kcal Atomic # 8 Polarization: -8.78 SS G_CDS: 0.28 Total: -8.51 kcal Atomic # 14 Polarization: 21.07 SS G_CDS: -5.03 Total: 16.04 kcal Atomic # 17 Polarization: 0.77 SS G_CDS: -1.52 Total: -0.75 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -30.89 -7.80 -38.70 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000968417893.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 75.619 kcal (2) G-P(sol) polarization free energy of solvation -30.894 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.725 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.804 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.699 kcal (6) G-S(sol) free energy of system = (1) + (5) 36.920 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds