Wall clock time and date at job start Sat Apr 11 2020 06:17:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 N 1.30213 * 126.78959 * 2 1 4 4 O 1.20924 * 111.64705 * 180.29033 * 3 2 1 5 5 C 1.34062 * 111.55042 * 359.70587 * 4 3 2 6 6 Cl 1.73601 * 126.79688 * 180.02562 * 5 4 3 7 7 C 1.35675 * 106.40749 * 0.02562 * 5 4 3 8 8 C 1.50705 * 128.01243 * 180.02562 * 7 5 4 9 9 C 1.50698 * 109.47132 * 90.02412 * 8 7 5 10 10 O 1.21277 * 120.00219 * 0.02562 * 9 8 7 11 11 N 1.34774 * 120.00102 * 179.97438 * 9 8 7 12 12 C 1.46498 * 120.00538 * 180.02562 * 11 9 8 13 13 H 1.09006 * 109.52106 * 324.91980 * 12 11 9 14 14 C 1.53187 * 109.49876 * 84.99679 * 12 11 9 15 15 N 1.46928 * 108.89161 * 65.39434 * 14 12 11 16 16 C 1.36938 * 120.63198 * 233.55948 * 15 14 12 17 17 H 1.08004 * 119.99743 * 27.95513 * 16 15 14 18 18 C 1.38809 * 120.00327 * 207.95073 * 16 15 14 19 19 N 1.31619 * 119.99669 * 17.50758 * 18 16 15 20 20 Si 1.86796 * 120.00467 * 197.50314 * 18 16 15 21 21 H 1.48499 * 109.46954 * 94.06791 * 20 18 16 22 22 H 1.48494 * 109.47528 * 214.06816 * 20 18 16 23 23 H 1.48504 * 109.47085 * 334.07259 * 20 18 16 24 24 C 1.46924 * 118.73877 * 53.53159 * 15 14 12 25 25 C 1.53186 * 108.78012 * 306.39573 * 24 15 14 26 26 C 1.53046 * 109.31374 * 54.63122 * 25 24 15 27 27 H 1.09001 * 109.45293 * 58.64203 * 26 25 24 28 28 C 1.52993 * 109.46224 * 178.61322 * 26 25 24 29 29 H 1.08994 * 109.46993 * 270.19290 * 1 2 3 30 30 H 1.08994 * 109.47329 * 30.19584 * 1 2 3 31 31 H 1.09005 * 109.46798 * 150.19505 * 1 2 3 32 32 H 1.09000 * 109.47051 * 330.02323 * 8 7 5 33 33 H 1.08996 * 109.46960 * 210.02564 * 8 7 5 34 34 H 0.97007 * 119.99996 * 0.02562 * 11 9 8 35 35 H 1.08996 * 109.58831 * 305.53754 * 14 12 11 36 36 H 1.08996 * 109.58656 * 185.24793 * 14 12 11 37 37 H 0.97004 * 120.00381 * 179.97438 * 19 18 16 38 38 H 1.09002 * 109.58512 * 66.18443 * 24 15 14 39 39 H 1.09001 * 109.58798 * 186.60575 * 24 15 14 40 40 H 1.09003 * 109.50288 * 174.58567 * 25 24 15 41 41 H 1.09001 * 109.50009 * 294.68154 * 25 24 15 42 42 H 1.09009 * 109.46677 * 60.00323 * 28 26 25 43 43 H 1.08993 * 109.47382 * 180.02562 * 28 26 25 44 44 H 1.09003 * 109.47516 * 300.00685 * 28 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2868 1.0428 0.0000 4 8 3.4541 0.7269 -0.0057 5 6 3.6037 -0.6053 -0.0039 6 17 5.1012 -1.4835 -0.0097 7 6 2.3531 -1.1314 0.0032 8 6 1.9581 -2.5858 0.0084 9 6 1.8327 -3.0671 1.4310 10 8 2.0428 -2.3043 2.3501 11 7 1.4859 -4.3451 1.6818 12 6 1.3634 -4.8130 3.0647 13 1 2.1119 -4.3188 3.6841 14 6 -0.0361 -4.4841 3.5936 15 7 -1.0263 -5.2594 2.8338 16 6 -2.0822 -4.6358 2.2243 17 1 -1.9890 -3.6101 1.8991 18 6 -3.2721 -5.3220 2.0244 19 7 -3.5195 -6.4220 2.7033 20 14 -4.5224 -4.6841 0.7918 21 1 -4.3084 -5.3481 -0.5191 22 1 -5.8935 -4.9808 1.2789 23 1 -4.3593 -3.2164 0.6357 24 6 -0.8616 -6.7163 2.7397 25 6 0.5458 -7.0208 2.2171 26 6 1.5781 -6.3279 3.1095 27 1 1.4646 -6.6783 4.1354 28 6 2.9864 -6.6580 2.6111 29 1 -0.3633 0.0035 1.0276 30 1 -0.3633 0.8882 -0.5168 31 1 -0.3633 -0.8918 -0.5108 32 1 2.7195 -3.1709 -0.5073 33 1 1.0018 -2.7043 -0.5009 34 1 1.3174 -4.9552 0.9467 35 1 -0.2327 -3.4192 3.4697 36 1 -0.0987 -4.7468 4.6496 37 1 -4.3512 -6.9014 2.5640 38 1 -0.9898 -7.1629 3.7258 39 1 -1.6028 -7.1242 2.0524 40 1 0.7150 -8.0975 2.2334 41 1 0.6422 -6.6525 1.1957 42 1 3.0998 -6.3082 1.5849 43 1 3.7217 -6.1650 3.2468 44 1 3.1409 -7.7365 2.6464 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000968417894.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:17:59 Heat of formation + Delta-G solvation = 36.510874 kcal Electronic energy + Delta-G solvation = -28735.932358 eV Core-core repulsion = 24718.170395 eV Total energy + Delta-G solvation = -4017.761964 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 341.129 amu Computer time = 1.88 seconds Orbital eigenvalues (eV) -45.12594 -39.80296 -37.79151 -37.34043 -35.35752 -34.25163 -32.81888 -32.42567 -31.12771 -29.79664 -28.90015 -28.33847 -27.16006 -24.13568 -22.81145 -21.99313 -21.56059 -21.14899 -20.36180 -18.74324 -18.01138 -17.80582 -17.02577 -16.51235 -15.74735 -15.52074 -14.83231 -14.64093 -14.06289 -14.04609 -13.70818 -13.53199 -13.40551 -13.35298 -13.11937 -12.98973 -12.74919 -12.60480 -12.53630 -12.17307 -12.02178 -11.94534 -11.64379 -11.44456 -11.19271 -11.00956 -10.87228 -10.81108 -10.39465 -10.28673 -10.08641 -10.00607 -9.69654 -9.61230 -9.51602 -9.22140 -8.68366 -8.41108 -6.69145 -5.83246 -3.25153 0.90930 1.13235 1.98315 2.95088 3.32049 3.39866 3.41456 3.43168 3.66448 3.95647 4.44542 4.45506 4.71119 4.79418 5.05754 5.20073 5.25522 5.29660 5.31397 5.37697 5.46908 5.50305 5.52311 5.59842 5.65707 5.86175 5.90967 5.99542 6.05623 6.15900 6.19655 6.37387 6.39200 6.54492 6.61182 6.76744 6.80932 7.04396 7.27796 7.58883 7.75498 7.91420 7.98261 8.40363 8.58596 9.17139 9.80258 10.37323 11.25015 Molecular weight = 341.13amu Principal moments of inertia in cm(-1) A = 0.011520 B = 0.004100 C = 0.003222 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2430.006585 B = 6828.159277 C = 8688.003891 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 C 0.049 3.951 3 N -0.351 5.351 4 O 0.107 5.893 5 C 0.008 3.992 6 Cl 0.044 6.956 7 C -0.141 4.141 8 C -0.071 4.071 9 C 0.516 3.484 10 O -0.543 6.543 11 N -0.698 5.698 12 C 0.137 3.863 13 H 0.077 0.923 14 C 0.135 3.865 15 N -0.586 5.586 16 C -0.247 4.247 17 H 0.063 0.937 18 C 0.003 3.997 19 N -0.902 5.902 20 Si 0.898 3.102 21 H -0.288 1.288 22 H -0.292 1.292 23 H -0.279 1.279 24 C 0.168 3.832 25 C -0.136 4.136 26 C -0.094 4.094 27 H 0.077 0.923 28 C -0.144 4.144 29 H 0.089 0.911 30 H 0.079 0.921 31 H 0.086 0.914 32 H 0.106 0.894 33 H 0.115 0.885 34 H 0.399 0.601 35 H 0.058 0.942 36 H 0.024 0.976 37 H 0.253 0.747 38 H 0.018 0.982 39 H 0.087 0.913 40 H 0.052 0.948 41 H 0.051 0.949 42 H 0.050 0.950 43 H 0.048 0.952 44 H 0.051 0.949 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 14.627 3.787 -7.203 16.739 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.137 4.137 2 C -0.110 4.110 3 N -0.058 5.058 4 O 0.041 5.959 5 C -0.082 4.082 6 Cl 0.072 6.928 7 C -0.146 4.146 8 C -0.111 4.111 9 C 0.301 3.699 10 O -0.420 6.420 11 N -0.349 5.349 12 C 0.031 3.969 13 H 0.095 0.905 14 C 0.007 3.993 15 N -0.309 5.309 16 C -0.376 4.376 17 H 0.081 0.919 18 C -0.195 4.195 19 N -0.546 5.546 20 Si 0.729 3.271 21 H -0.215 1.215 22 H -0.218 1.218 23 H -0.204 1.204 24 C 0.043 3.957 25 C -0.175 4.175 26 C -0.113 4.113 27 H 0.095 0.905 28 C -0.201 4.201 29 H 0.108 0.892 30 H 0.097 0.903 31 H 0.105 0.895 32 H 0.124 0.876 33 H 0.133 0.867 34 H 0.235 0.765 35 H 0.077 0.923 36 H 0.042 0.958 37 H 0.063 0.937 38 H 0.036 0.964 39 H 0.105 0.895 40 H 0.071 0.929 41 H 0.070 0.930 42 H 0.069 0.931 43 H 0.067 0.933 44 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges 14.529 5.469 -6.523 16.839 hybrid contribution -0.646 -0.970 -0.895 1.469 sum 13.884 4.498 -7.418 16.371 Atomic orbital electron populations 1.20268 0.84990 1.04010 1.04463 1.23286 0.99178 0.87636 1.00872 1.73906 0.88435 1.22859 1.20571 1.84885 1.22226 1.20497 1.68297 1.24409 0.90605 0.85003 1.08156 1.98439 1.28458 1.69138 1.96754 1.20120 0.89960 0.96951 1.07568 1.20010 1.04945 0.89400 0.96768 1.20090 0.77141 0.82400 0.90244 1.90694 1.50690 1.54484 1.46179 1.45848 1.68696 1.10887 1.09421 1.21553 0.99524 0.93568 0.82291 0.90490 1.21277 0.87900 0.96396 0.93680 1.43992 1.26048 1.02263 1.58570 1.19132 0.90035 0.97682 1.30799 0.91907 1.25014 0.96573 0.98443 0.99516 1.70036 1.24768 1.19404 1.40405 0.86333 0.80993 0.78463 0.81349 1.21542 1.21837 1.20429 1.20800 0.91692 0.84341 0.98901 1.22253 0.98416 0.98379 0.98487 1.21321 0.94720 0.94461 1.00812 0.90502 1.21844 0.96620 1.00732 1.00909 0.89229 0.90261 0.89477 0.87623 0.86708 0.76519 0.92302 0.95773 0.93688 0.96401 0.89467 0.92919 0.93010 0.93063 0.93292 0.93024 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 31. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.95 10.39 36.01 0.37 -0.58 16 2 C 0.05 0.68 7.32 -82.12 -0.60 0.08 16 3 N -0.35 -5.19 12.07 33.44 0.40 -4.78 16 4 O 0.11 1.49 11.20 17.12 0.19 1.68 16 5 C 0.01 0.11 8.12 29.82 0.24 0.35 16 6 Cl 0.04 0.46 29.23 -51.86 -1.52 -1.06 16 7 C -0.14 -1.87 4.82 -104.38 -0.50 -2.37 16 8 C -0.07 -0.83 6.10 -29.03 -0.18 -1.01 16 9 C 0.52 7.87 7.79 -10.99 -0.09 7.79 16 10 O -0.54 -10.29 15.70 5.56 0.09 -10.20 16 11 N -0.70 -10.36 4.25 -53.68 -0.23 -10.59 16 12 C 0.14 2.24 2.25 -67.80 -0.15 2.09 16 13 H 0.08 1.30 7.58 -51.93 -0.39 0.90 16 14 C 0.13 2.76 6.11 -3.71 -0.02 2.73 16 15 N -0.59 -13.47 2.92 -172.33 -0.50 -13.97 16 16 C -0.25 -6.34 9.58 -15.06 -0.14 -6.48 16 17 H 0.06 1.62 7.89 -52.48 -0.41 1.21 16 18 C 0.00 0.08 4.90 -17.43 -0.09 0.00 16 19 N -0.90 -25.03 11.22 55.49 0.62 -24.41 16 20 Si 0.90 20.71 29.59 -169.99 -5.03 15.68 16 21 H -0.29 -6.58 7.11 56.52 0.40 -6.18 16 22 H -0.29 -6.92 7.11 56.52 0.40 -6.52 16 23 H -0.28 -6.30 7.11 56.52 0.40 -5.90 16 24 C 0.17 3.65 5.31 -3.72 -0.02 3.63 16 25 C -0.14 -2.21 5.20 -26.61 -0.14 -2.35 16 26 C -0.09 -1.38 2.47 -90.56 -0.22 -1.60 16 27 H 0.08 1.16 8.14 -51.93 -0.42 0.74 16 28 C -0.14 -1.71 9.04 37.15 0.34 -1.38 16 29 H 0.09 1.15 8.14 -51.93 -0.42 0.72 16 30 H 0.08 0.82 8.14 -51.93 -0.42 0.39 16 31 H 0.09 0.92 7.65 -51.93 -0.40 0.53 16 32 H 0.11 0.96 8.14 -51.93 -0.42 0.54 16 33 H 0.11 1.19 7.65 -51.93 -0.40 0.79 16 34 H 0.40 5.40 6.63 -40.82 -0.27 5.13 16 35 H 0.06 1.30 7.93 -51.93 -0.41 0.89 16 36 H 0.02 0.51 8.14 -51.93 -0.42 0.09 16 37 H 0.25 6.85 8.31 -40.82 -0.34 6.51 16 38 H 0.02 0.42 8.14 -51.93 -0.42 -0.01 16 39 H 0.09 2.15 6.06 -51.93 -0.31 1.83 16 40 H 0.05 0.78 8.14 -51.93 -0.42 0.36 16 41 H 0.05 0.81 6.41 -51.93 -0.33 0.48 16 42 H 0.05 0.58 7.53 -51.92 -0.39 0.19 16 43 H 0.05 0.57 8.14 -51.93 -0.42 0.14 16 44 H 0.05 0.56 8.14 -51.93 -0.42 0.14 16 LS Contribution 373.83 15.07 5.63 5.63 Total: -1.00 -30.33 373.83 -7.80 -38.14 By element: Atomic # 1 Polarization: 9.24 SS G_CDS: -6.26 Total: 2.98 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -1.20 Total: 0.90 kcal Atomic # 7 Polarization: -54.05 SS G_CDS: 0.30 Total: -53.75 kcal Atomic # 8 Polarization: -8.80 SS G_CDS: 0.28 Total: -8.52 kcal Atomic # 14 Polarization: 20.71 SS G_CDS: -5.03 Total: 15.68 kcal Atomic # 17 Polarization: 0.46 SS G_CDS: -1.52 Total: -1.06 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -30.33 -7.80 -38.14 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000968417894.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 74.646 kcal (2) G-P(sol) polarization free energy of solvation -30.332 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.314 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.803 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.136 kcal (6) G-S(sol) free energy of system = (1) + (5) 36.511 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.88 seconds