Wall clock time and date at job start Sat Apr 11 2020 06:18:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 N 1.30218 * 126.78836 * 2 1 4 4 O 1.20916 * 111.64557 * 180.25864 * 3 2 1 5 5 C 1.34065 * 111.55473 * 359.73292 * 4 3 2 6 6 Cl 1.73594 * 126.80036 * 179.97438 * 5 4 3 7 7 C 1.35684 * 106.40364 * 359.97438 * 5 4 3 8 8 C 1.50700 * 128.01106 * 179.97438 * 7 5 4 9 9 C 1.50706 * 109.46757 * 90.02505 * 8 7 5 10 10 O 1.21278 * 120.00163 * 359.97438 * 9 8 7 11 11 N 1.34781 * 119.99804 * 180.02562 * 9 8 7 12 12 C 1.46499 * 119.99874 * 179.97438 * 11 9 8 13 13 H 1.08992 * 109.47397 * 34.99792 * 12 11 9 14 14 C 1.53000 * 109.46840 * 274.99457 * 12 11 9 15 15 C 1.52997 * 109.47060 * 180.02562 * 14 12 11 16 16 C 1.52999 * 109.47317 * 59.99960 * 15 14 12 17 17 C 1.53005 * 109.47159 * 300.00546 * 16 15 14 18 18 H 1.09002 * 109.46935 * 299.99411 * 17 16 15 19 19 N 1.46500 * 109.47094 * 179.97438 * 17 16 15 20 20 C 1.36943 * 120.00134 * 84.99505 * 19 17 16 21 21 H 1.08007 * 119.99758 * 0.02562 * 20 19 17 22 22 C 1.38802 * 120.00199 * 179.97438 * 20 19 17 23 23 N 1.31620 * 120.00190 * 179.97438 * 22 20 19 24 24 Si 1.86802 * 120.00051 * 0.02562 * 22 20 19 25 25 H 1.48492 * 109.47500 * 89.99631 * 24 22 20 26 26 H 1.48500 * 109.46957 * 209.99741 * 24 22 20 27 27 H 1.48499 * 109.46983 * 329.99436 * 24 22 20 28 28 C 1.52997 * 109.47452 * 59.99536 * 17 16 15 29 29 H 1.08999 * 109.47011 * 270.18314 * 1 2 3 30 30 H 1.08996 * 109.47236 * 30.18081 * 1 2 3 31 31 H 1.09000 * 109.47002 * 150.18086 * 1 2 3 32 32 H 1.08993 * 109.47151 * 330.02658 * 8 7 5 33 33 H 1.09002 * 109.47064 * 210.01916 * 8 7 5 34 34 H 0.97002 * 119.99716 * 359.97438 * 11 9 8 35 35 H 1.09002 * 109.47398 * 300.00326 * 14 12 11 36 36 H 1.09001 * 109.47194 * 60.00507 * 14 12 11 37 37 H 1.08996 * 109.47853 * 180.02562 * 15 14 12 38 38 H 1.09002 * 109.47153 * 300.00319 * 15 14 12 39 39 H 1.09000 * 109.47486 * 180.02562 * 16 15 14 40 40 H 1.09002 * 109.46716 * 60.00091 * 16 15 14 41 41 H 0.97004 * 120.00223 * 264.99822 * 19 17 16 42 42 H 0.96997 * 120.00077 * 179.97438 * 23 22 20 43 43 H 1.08993 * 109.47194 * 179.97438 * 28 17 16 44 44 H 1.09002 * 109.46695 * 59.99734 * 28 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2868 1.0429 0.0000 4 8 3.4540 0.7270 -0.0051 5 6 3.6037 -0.6053 -0.0034 6 17 5.1012 -1.4834 -0.0097 7 6 2.3531 -1.1314 0.0042 8 6 1.9581 -2.5857 0.0084 9 6 1.8336 -3.0682 1.4307 10 8 2.0453 -2.3063 2.3503 11 7 1.4881 -4.3468 1.6807 12 6 1.3676 -4.8160 3.0633 13 1 0.9781 -4.0117 3.6873 14 6 2.7438 -5.2411 3.5793 15 6 2.6179 -5.7317 5.0230 16 6 1.6627 -6.9258 5.0744 17 6 0.2865 -6.5007 4.5583 18 1 -0.1032 -5.6966 5.1827 19 7 -0.6279 -7.6442 4.6070 20 6 -1.2978 -7.9365 5.7651 21 1 -1.1523 -7.3236 6.6425 22 6 -2.1646 -9.0196 5.8111 23 7 -2.8081 -9.3008 6.9244 24 14 -2.4168 -10.0791 4.2935 25 1 -1.4284 -11.1873 4.2935 26 1 -3.7911 -10.6417 4.3054 27 1 -2.2317 -9.2507 3.0751 28 6 0.4124 -6.0101 3.1146 29 1 -0.3633 0.0033 1.0277 30 1 -0.3633 0.8883 -0.5166 31 1 -0.3633 -0.8916 -0.5110 32 1 2.7191 -3.1704 -0.5083 33 1 1.0014 -2.7038 -0.5004 34 1 1.3191 -4.9562 0.9452 35 1 3.1333 -6.0455 2.9552 36 1 3.4244 -4.3905 3.5423 37 1 3.5983 -6.0342 5.3908 38 1 2.2282 -4.9277 5.6473 39 1 1.5727 -7.2751 6.1030 40 1 2.0524 -7.7299 4.4501 41 1 -0.7589 -8.1945 3.8190 42 1 -3.4141 -10.0575 6.9564 43 1 -0.5681 -5.7077 2.7469 44 1 0.8021 -6.8142 2.4904 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000981382418.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:18:53 Heat of formation + Delta-G solvation = 19.849148 kcal Electronic energy + Delta-G solvation = -27255.728345 eV Core-core repulsion = 23237.243874 eV Total energy + Delta-G solvation = -4018.484470 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 341.129 amu Computer time = 1.73 seconds Orbital eigenvalues (eV) -45.41087 -40.16033 -38.20364 -37.60123 -35.73192 -34.82732 -33.47707 -32.78159 -31.37835 -30.18489 -29.21442 -28.73189 -27.92683 -23.63768 -23.02991 -22.05701 -21.86635 -21.15623 -20.41985 -19.61324 -18.29322 -18.12093 -17.65323 -16.98320 -16.44594 -15.95777 -15.21822 -14.84159 -14.57127 -14.17537 -13.92664 -13.87063 -13.75794 -13.59416 -13.53282 -13.25677 -13.07239 -12.82624 -12.78556 -12.55533 -12.36102 -12.26665 -12.14895 -11.30930 -11.28961 -11.08281 -11.02141 -10.89935 -10.48093 -10.42067 -10.37045 -10.25174 -10.07520 -9.84036 -9.62256 -9.52073 -9.11474 -8.92699 -7.30637 -5.79488 -3.15512 0.65996 0.85157 1.66934 2.44210 2.99654 3.23991 3.33205 3.35924 3.42120 3.63746 4.10352 4.37935 4.39530 4.55646 4.64006 4.81095 4.93068 4.95146 5.08545 5.13513 5.20728 5.23116 5.29119 5.41539 5.46739 5.54330 5.58583 5.68408 5.73982 5.77081 5.89089 6.02258 6.16442 6.18609 6.32905 6.42758 6.48238 6.60394 6.85151 6.99086 7.34626 7.70217 7.96960 8.05805 8.39482 9.17685 9.89978 10.09432 11.38864 Molecular weight = 341.13amu Principal moments of inertia in cm(-1) A = 0.019449 B = 0.002312 C = 0.002196 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1439.302674 B =12106.155160 C =12745.253989 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 C 0.045 3.955 3 N -0.347 5.347 4 O 0.110 5.890 5 C 0.014 3.986 6 Cl 0.049 6.951 7 C -0.150 4.150 8 C -0.069 4.069 9 C 0.514 3.486 10 O -0.529 6.529 11 N -0.723 5.723 12 C 0.150 3.850 13 H 0.089 0.911 14 C -0.124 4.124 15 C -0.115 4.115 16 C -0.137 4.137 17 C 0.188 3.812 18 H 0.057 0.943 19 N -0.748 5.748 20 C -0.242 4.242 21 H 0.091 0.909 22 C 0.004 3.996 23 N -0.934 5.934 24 Si 0.885 3.115 25 H -0.285 1.285 26 H -0.292 1.292 27 H -0.278 1.278 28 C -0.133 4.133 29 H 0.088 0.912 30 H 0.081 0.919 31 H 0.084 0.916 32 H 0.110 0.890 33 H 0.114 0.886 34 H 0.399 0.601 35 H 0.060 0.940 36 H 0.060 0.940 37 H 0.058 0.942 38 H 0.061 0.939 39 H 0.067 0.933 40 H 0.054 0.946 41 H 0.360 0.640 42 H 0.259 0.741 43 H 0.069 0.931 44 H 0.063 0.937 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 13.578 15.394 -19.714 28.460 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C -0.113 4.113 3 N -0.054 5.054 4 O 0.044 5.956 5 C -0.077 4.077 6 Cl 0.077 6.923 7 C -0.155 4.155 8 C -0.109 4.109 9 C 0.299 3.701 10 O -0.404 6.404 11 N -0.374 5.374 12 C 0.045 3.955 13 H 0.108 0.892 14 C -0.163 4.163 15 C -0.154 4.154 16 C -0.177 4.177 17 C 0.078 3.922 18 H 0.075 0.925 19 N -0.390 5.390 20 C -0.372 4.372 21 H 0.108 0.892 22 C -0.192 4.192 23 N -0.581 5.581 24 Si 0.716 3.284 25 H -0.211 1.211 26 H -0.218 1.218 27 H -0.204 1.204 28 C -0.172 4.172 29 H 0.106 0.894 30 H 0.100 0.900 31 H 0.103 0.897 32 H 0.128 0.872 33 H 0.132 0.868 34 H 0.233 0.767 35 H 0.079 0.921 36 H 0.079 0.921 37 H 0.077 0.923 38 H 0.080 0.920 39 H 0.086 0.914 40 H 0.072 0.928 41 H 0.193 0.807 42 H 0.069 0.931 43 H 0.088 0.912 44 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges 13.525 17.184 -18.790 28.832 hybrid contribution -0.073 -2.132 -1.345 2.522 sum 13.452 15.052 -20.136 28.513 Atomic orbital electron populations 1.20250 0.85129 1.04000 1.04236 1.23260 0.99132 0.87667 1.01287 1.73934 0.88445 1.22826 1.20166 1.84911 1.22179 1.20492 1.68019 1.24487 0.90825 0.85049 1.07297 1.98458 1.28250 1.68943 1.96649 1.20060 0.90094 0.96763 1.08614 1.20001 1.05056 0.89769 0.96123 1.20292 0.76995 0.82171 0.90631 1.90746 1.48792 1.54744 1.46159 1.46124 1.70567 1.11193 1.09504 1.21020 0.95886 0.97029 0.81523 0.89244 1.21885 0.96538 1.00551 0.97292 1.21479 0.99671 0.98859 0.95356 1.22255 0.96381 0.96629 1.02456 1.20069 0.89473 0.90440 0.92197 0.92503 1.42763 1.51550 1.32399 1.12312 1.19075 1.17917 1.10254 0.89986 0.89162 1.24679 0.99230 0.98633 0.96665 1.69700 1.32165 1.30711 1.25572 0.86541 0.77343 0.80958 0.83589 1.21150 1.21807 1.20398 1.22129 0.98797 0.96358 0.99879 0.89370 0.90050 0.89745 0.87167 0.86780 0.76674 0.92093 0.92082 0.92339 0.91993 0.91382 0.92763 0.80740 0.93056 0.91212 0.91807 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 27. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.56 10.39 36.01 0.37 -0.19 16 2 C 0.05 0.46 7.32 -82.12 -0.60 -0.14 16 3 N -0.35 -4.10 12.07 33.44 0.40 -3.69 16 4 O 0.11 1.25 11.20 17.11 0.19 1.44 16 5 C 0.01 0.14 8.12 29.82 0.24 0.38 16 6 Cl 0.05 0.40 29.23 -51.86 -1.52 -1.12 16 7 C -0.15 -1.43 4.82 -104.38 -0.50 -1.93 16 8 C -0.07 -0.48 6.10 -29.03 -0.18 -0.66 16 9 C 0.51 5.37 7.79 -10.98 -0.09 5.29 16 10 O -0.53 -7.86 15.70 5.56 0.09 -7.77 16 11 N -0.72 -6.79 5.08 -53.81 -0.27 -7.06 16 12 C 0.15 1.83 2.46 -67.93 -0.17 1.66 16 13 H 0.09 1.29 7.58 -51.93 -0.39 0.89 16 14 C -0.12 -1.50 5.49 -26.73 -0.15 -1.65 16 15 C -0.11 -1.54 5.92 -26.73 -0.16 -1.70 16 16 C -0.14 -2.24 5.50 -26.73 -0.15 -2.39 16 17 C 0.19 3.36 2.77 -67.93 -0.19 3.17 16 18 H 0.06 1.10 8.08 -51.93 -0.42 0.68 16 19 N -0.75 -16.80 4.92 -53.42 -0.26 -17.07 16 20 C -0.24 -6.64 10.41 -15.06 -0.16 -6.79 16 21 H 0.09 2.67 8.06 -52.48 -0.42 2.24 16 22 C 0.00 0.10 5.50 -17.43 -0.10 0.01 16 23 N -0.93 -28.93 13.97 55.49 0.78 -28.16 16 24 Si 0.89 21.51 27.74 -169.99 -4.71 16.79 16 25 H -0.28 -6.90 7.11 56.52 0.40 -6.49 16 26 H -0.29 -7.23 7.11 56.52 0.40 -6.83 16 27 H -0.28 -6.25 6.52 56.52 0.37 -5.88 16 28 C -0.13 -1.82 4.86 -26.73 -0.13 -1.95 16 29 H 0.09 0.68 8.14 -51.93 -0.42 0.26 16 30 H 0.08 0.50 8.14 -51.93 -0.42 0.08 16 31 H 0.08 0.42 7.65 -51.93 -0.40 0.02 16 32 H 0.11 0.53 8.14 -51.93 -0.42 0.11 16 33 H 0.11 0.49 7.65 -51.93 -0.40 0.09 16 34 H 0.40 2.58 8.60 -40.82 -0.35 2.23 16 35 H 0.06 0.69 8.14 -51.93 -0.42 0.26 16 36 H 0.06 0.78 8.14 -51.93 -0.42 0.35 16 37 H 0.06 0.72 8.14 -51.93 -0.42 0.30 16 38 H 0.06 0.86 8.14 -51.93 -0.42 0.43 16 39 H 0.07 1.27 8.14 -51.93 -0.42 0.84 16 40 H 0.05 0.87 8.14 -51.93 -0.42 0.45 16 41 H 0.36 7.89 5.66 -40.82 -0.23 7.66 16 42 H 0.26 7.66 8.31 -40.82 -0.34 7.32 16 43 H 0.07 0.98 8.14 -51.93 -0.42 0.55 16 44 H 0.06 0.81 8.14 -51.93 -0.42 0.38 16 LS Contribution 379.23 15.07 5.71 5.71 Total: -1.00 -33.90 379.23 -7.97 -41.87 By element: Atomic # 1 Polarization: 12.39 SS G_CDS: -6.43 Total: 5.96 kcal Atomic # 6 Polarization: -4.96 SS G_CDS: -1.94 Total: -6.90 kcal Atomic # 7 Polarization: -56.62 SS G_CDS: 0.64 Total: -55.98 kcal Atomic # 8 Polarization: -6.61 SS G_CDS: 0.28 Total: -6.34 kcal Atomic # 14 Polarization: 21.51 SS G_CDS: -4.71 Total: 16.79 kcal Atomic # 17 Polarization: 0.40 SS G_CDS: -1.52 Total: -1.12 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -33.90 -7.97 -41.87 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000981382418.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 61.717 kcal (2) G-P(sol) polarization free energy of solvation -33.902 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.815 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.966 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.868 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.849 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.73 seconds