Wall clock time and date at job start Sat Apr 11 2020 06:19:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 N 1.30214 * 126.78720 * 2 1 4 4 O 1.20914 * 111.64556 * 180.26359 * 3 2 1 5 5 C 1.34059 * 111.55509 * 359.72817 * 4 3 2 6 6 Cl 1.73598 * 126.80069 * 179.97438 * 5 4 3 7 7 C 1.35678 * 106.40594 * 0.02562 * 5 4 3 8 8 C 1.50699 * 128.01609 * 179.97438 * 7 5 4 9 9 C 1.53007 * 109.46970 * 90.02288 * 8 7 5 10 10 C 1.50704 * 109.46850 * 180.02562 * 9 8 7 11 11 O 1.21277 * 119.99864 * 359.97438 * 10 9 8 12 12 N 1.34780 * 119.99504 * 180.02562 * 10 9 8 13 13 C 1.47419 * 125.65006 * 0.02562 * 12 10 9 14 14 C 1.54905 * 104.92834 * 204.05588 * 13 12 10 15 15 C 1.55282 * 101.53029 * 323.13017 * 14 13 12 16 16 H 1.08998 * 110.77201 * 276.94152 * 15 14 13 17 17 N 1.46491 * 110.75893 * 153.77787 * 15 14 13 18 18 C 1.36932 * 119.99998 * 91.37947 * 17 15 14 19 19 H 1.08003 * 120.00477 * 359.97438 * 18 17 15 20 20 C 1.38825 * 120.00141 * 179.97438 * 18 17 15 21 21 N 1.31615 * 119.99654 * 359.97438 * 20 18 17 22 22 Si 1.86793 * 120.00065 * 179.97438 * 20 18 17 23 23 H 1.48506 * 109.47153 * 60.00143 * 22 20 18 24 24 H 1.48497 * 109.47061 * 179.97438 * 22 20 18 25 25 H 1.48503 * 109.47335 * 300.00011 * 22 20 18 26 26 C 1.47023 * 125.64409 * 180.02562 * 12 10 9 27 27 H 1.09002 * 109.88373 * 59.54097 * 26 12 10 28 28 C 1.52999 * 109.88034 * 298.52925 * 26 12 10 29 29 H 1.09001 * 109.47065 * 270.17582 * 1 2 3 30 30 H 1.08992 * 109.47255 * 30.18566 * 1 2 3 31 31 H 1.09003 * 109.46818 * 150.18694 * 1 2 3 32 32 H 1.08994 * 109.46812 * 330.02221 * 8 7 5 33 33 H 1.08995 * 109.47078 * 210.01598 * 8 7 5 34 34 H 1.08993 * 109.47297 * 59.99763 * 9 8 7 35 35 H 1.09008 * 109.46795 * 299.99777 * 9 8 7 36 36 H 1.09002 * 110.36926 * 322.95057 * 13 12 10 37 37 H 1.08995 * 110.36556 * 85.16341 * 13 12 10 38 38 H 1.09001 * 111.00720 * 81.12130 * 14 13 12 39 39 H 1.08996 * 111.00844 * 204.97306 * 14 13 12 40 40 H 0.97002 * 120.00134 * 271.37390 * 17 15 14 41 41 H 0.97001 * 120.00130 * 179.97438 * 21 20 18 42 42 H 1.09008 * 109.47282 * 61.45462 * 28 26 12 43 43 H 1.09003 * 109.47218 * 181.45554 * 28 26 12 44 44 H 1.09004 * 109.47562 * 301.45759 * 28 26 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2868 1.0428 0.0000 4 8 3.4540 0.7270 -0.0052 5 6 3.6037 -0.6052 -0.0035 6 17 5.1012 -1.4833 -0.0099 7 6 2.3531 -1.1314 0.0031 8 6 1.9581 -2.5857 0.0069 9 6 1.8306 -3.0757 1.4507 10 6 1.4362 -4.5302 1.4545 11 8 1.2727 -5.1169 0.4057 12 7 1.2642 -5.1787 2.6235 13 6 1.4277 -4.5896 3.9650 14 6 1.7374 -5.7906 4.8931 15 6 0.8320 -6.8952 4.2839 16 1 -0.1873 -6.8109 4.6607 17 7 1.3773 -8.2259 4.5629 18 6 0.9868 -8.9041 5.6865 19 1 0.2771 -8.4579 6.3674 20 6 1.5032 -10.1654 5.9506 21 7 2.3677 -10.7095 5.1207 22 14 0.9710 -11.0902 7.4838 23 1 -0.4981 -11.3044 7.4478 24 1 1.6612 -12.4041 7.5338 25 1 1.3264 -10.2977 8.6884 26 6 0.8823 -6.5907 2.7719 27 1 1.6237 -7.2279 2.2898 28 6 -0.4930 -6.8264 2.1444 29 1 -0.3633 0.0032 1.0277 30 1 -0.3633 0.8882 -0.5167 31 1 -0.3633 -0.8917 -0.5109 32 1 2.7195 -3.1703 -0.5093 33 1 1.0018 -2.7038 -0.5026 34 1 1.0693 -2.4911 1.9670 35 1 2.7870 -2.9576 1.9603 36 1 2.2571 -3.8823 3.9702 37 1 0.5074 -4.0963 4.2774 38 1 2.7890 -6.0708 4.8317 39 1 1.4522 -5.5728 5.9222 40 1 2.0150 -8.6267 3.9515 41 1 2.7288 -11.5906 5.3053 42 1 -0.4506 -6.5976 1.0795 43 1 -0.7808 -7.8689 2.2809 44 1 -1.2276 -6.1807 2.6257 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000987602385.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:19:22 Heat of formation + Delta-G solvation = 29.457702 kcal Electronic energy + Delta-G solvation = -27211.193947 eV Core-core repulsion = 23193.126135 eV Total energy + Delta-G solvation = -4018.067812 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 341.129 amu Computer time = 2.76 seconds Orbital eigenvalues (eV) -45.44844 -40.06930 -37.75100 -37.52697 -36.10479 -34.16383 -33.49307 -31.83282 -31.04656 -30.63510 -29.23021 -29.01539 -25.66981 -25.23902 -23.08554 -22.56187 -21.90292 -21.47165 -20.11695 -18.80275 -18.19828 -18.09059 -17.30080 -16.89176 -16.22482 -15.84573 -15.14176 -14.86887 -14.60417 -13.93113 -13.80008 -13.69980 -13.43957 -13.30021 -13.24962 -13.17694 -13.04297 -12.83294 -12.72629 -12.44769 -12.12902 -12.09012 -11.90924 -11.65377 -11.52200 -11.19447 -11.12718 -11.05775 -10.86022 -10.62282 -10.35765 -10.29852 -10.08377 -9.81915 -9.72118 -9.46455 -8.97600 -8.43800 -7.07266 -5.84861 -3.15486 0.69601 0.80216 1.64347 2.73751 3.06489 3.24594 3.39056 3.43949 3.44986 3.62669 4.14275 4.39525 4.43231 4.51857 4.74177 4.86632 4.91626 4.99920 5.07653 5.13429 5.22924 5.27937 5.30983 5.35401 5.45207 5.56057 5.59772 5.64461 5.70183 5.76424 5.85526 5.91535 6.06097 6.09848 6.26037 6.42352 6.54826 6.58192 6.70042 6.87792 7.61683 7.65990 7.73014 8.28774 8.32773 9.43832 9.98153 10.32721 11.37191 Molecular weight = 341.13amu Principal moments of inertia in cm(-1) A = 0.020770 B = 0.002211 C = 0.002135 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1347.775549 B =12659.709278 C =13110.337506 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 C 0.034 3.966 3 N -0.348 5.348 4 O 0.109 5.891 5 C 0.000 4.000 6 Cl 0.052 6.948 7 C -0.163 4.163 8 C -0.029 4.029 9 C -0.131 4.131 10 C 0.527 3.473 11 O -0.544 6.544 12 N -0.608 5.608 13 C 0.098 3.902 14 C -0.157 4.157 15 C 0.177 3.823 16 H 0.067 0.933 17 N -0.714 5.714 18 C -0.246 4.246 19 H 0.072 0.928 20 C -0.009 4.009 21 N -0.930 5.930 22 Si 0.909 3.091 23 H -0.285 1.285 24 H -0.291 1.291 25 H -0.285 1.285 26 C 0.125 3.875 27 H 0.077 0.923 28 C -0.153 4.153 29 H 0.086 0.914 30 H 0.080 0.920 31 H 0.087 0.913 32 H 0.091 0.909 33 H 0.093 0.907 34 H 0.093 0.907 35 H 0.093 0.907 36 H 0.068 0.932 37 H 0.065 0.935 38 H 0.075 0.925 39 H 0.076 0.924 40 H 0.386 0.614 41 H 0.257 0.743 42 H 0.061 0.939 43 H 0.069 0.931 44 H 0.049 0.951 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.560 22.650 -9.556 24.590 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C -0.124 4.124 3 N -0.054 5.054 4 O 0.042 5.958 5 C -0.090 4.090 6 Cl 0.081 6.919 7 C -0.168 4.168 8 C -0.068 4.068 9 C -0.171 4.171 10 C 0.315 3.685 11 O -0.422 6.422 12 N -0.342 5.342 13 C -0.025 4.025 14 C -0.198 4.198 15 C 0.065 3.935 16 H 0.085 0.915 17 N -0.354 5.354 18 C -0.376 4.376 19 H 0.090 0.910 20 C -0.206 4.206 21 N -0.577 5.577 22 Si 0.739 3.261 23 H -0.212 1.212 24 H -0.217 1.217 25 H -0.212 1.212 26 C 0.021 3.979 27 H 0.095 0.905 28 C -0.211 4.211 29 H 0.104 0.896 30 H 0.099 0.901 31 H 0.106 0.894 32 H 0.109 0.891 33 H 0.111 0.889 34 H 0.112 0.888 35 H 0.111 0.889 36 H 0.086 0.914 37 H 0.083 0.917 38 H 0.093 0.907 39 H 0.095 0.905 40 H 0.220 0.780 41 H 0.067 0.933 42 H 0.080 0.920 43 H 0.088 0.912 44 H 0.068 0.932 Dipole moment (debyes) X Y Z Total from point charges -0.788 23.490 -10.025 25.552 hybrid contribution 0.321 -1.414 0.826 1.669 sum -0.467 22.076 -9.199 23.921 Atomic orbital electron populations 1.20259 0.85079 1.04336 1.03976 1.23376 0.99223 0.87818 1.02020 1.73955 0.88557 1.22994 1.19922 1.84914 1.22095 1.20768 1.68020 1.24649 0.91234 0.84886 1.08271 1.98477 1.28042 1.68777 1.96653 1.20911 0.89783 0.98406 1.07725 1.19718 1.04211 0.86405 0.96422 1.21598 1.03917 0.93494 0.98128 1.20088 0.77375 0.88440 0.82571 1.90692 1.51908 1.68845 1.30717 1.48595 1.67667 1.12363 1.05589 1.22382 1.00500 0.97189 0.82478 1.23599 1.02488 0.95285 0.98453 1.21257 0.96171 0.86603 0.89498 0.91508 1.42340 1.51890 1.13835 1.27318 1.19163 1.21105 0.97951 0.99431 0.91048 1.24771 0.99470 0.97547 0.98812 1.69651 1.33451 1.17186 1.37433 0.86254 0.77959 0.79153 0.82695 1.21171 1.21669 1.21189 1.21965 0.96776 0.80779 0.98343 0.90520 1.22032 0.95762 1.02257 1.01089 0.89593 0.90143 0.89384 0.89081 0.88900 0.88822 0.88858 0.91388 0.91692 0.90669 0.90545 0.77980 0.93286 0.91985 0.91187 0.93191 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 27. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.48 10.39 36.01 0.37 -0.11 16 2 C 0.03 0.31 7.32 -82.12 -0.60 -0.29 16 3 N -0.35 -3.71 12.07 33.43 0.40 -3.31 16 4 O 0.11 1.13 11.20 17.13 0.19 1.32 16 5 C 0.00 0.00 8.12 29.82 0.24 0.24 16 6 Cl 0.05 0.43 29.23 -51.86 -1.52 -1.08 16 7 C -0.16 -1.48 5.58 -104.38 -0.58 -2.06 16 8 C -0.03 -0.27 4.90 -27.88 -0.14 -0.41 16 9 C -0.13 -1.25 4.69 -27.88 -0.13 -1.38 16 10 C 0.53 7.21 7.64 -10.98 -0.08 7.13 16 11 O -0.54 -9.19 15.01 5.56 0.08 -9.11 16 12 N -0.61 -8.64 3.07 -163.02 -0.50 -9.14 16 13 C 0.10 1.17 6.69 -2.53 -0.02 1.16 16 14 C -0.16 -2.42 6.78 -24.52 -0.17 -2.59 16 15 C 0.18 3.25 3.14 -66.03 -0.21 3.04 16 16 H 0.07 1.23 7.80 -51.93 -0.41 0.83 16 17 N -0.71 -16.90 5.23 -51.59 -0.27 -17.17 16 18 C -0.25 -6.46 9.96 -15.06 -0.15 -6.61 16 19 H 0.07 1.80 7.83 -52.48 -0.41 1.39 16 20 C -0.01 -0.26 5.50 -17.43 -0.10 -0.36 16 21 N -0.93 -27.29 13.06 55.49 0.72 -26.56 16 22 Si 0.91 21.63 29.55 -169.99 -5.02 16.61 16 23 H -0.29 -6.68 7.11 56.52 0.40 -6.28 16 24 H -0.29 -7.03 7.11 56.52 0.40 -6.63 16 25 H -0.29 -6.66 7.11 56.52 0.40 -6.26 16 26 C 0.13 2.12 3.21 -66.95 -0.21 1.91 16 27 H 0.08 1.49 7.72 -51.93 -0.40 1.09 16 28 C -0.15 -2.46 9.11 37.16 0.34 -2.12 16 29 H 0.09 0.44 8.14 -51.93 -0.42 0.01 16 30 H 0.08 0.44 8.14 -51.93 -0.42 0.02 16 31 H 0.09 0.45 7.65 -51.93 -0.40 0.05 16 32 H 0.09 0.92 8.10 -51.93 -0.42 0.50 16 33 H 0.09 0.83 7.60 -51.93 -0.39 0.44 16 34 H 0.09 0.73 8.14 -51.93 -0.42 0.31 16 35 H 0.09 0.82 7.85 -51.92 -0.41 0.41 16 36 H 0.07 0.67 7.48 -51.93 -0.39 0.28 16 37 H 0.06 0.67 8.14 -51.93 -0.42 0.25 16 38 H 0.07 1.28 8.14 -51.93 -0.42 0.86 16 39 H 0.08 1.13 8.14 -51.93 -0.42 0.70 16 40 H 0.39 9.91 7.56 -40.82 -0.31 9.60 16 41 H 0.26 7.35 8.31 -40.82 -0.34 7.01 16 42 H 0.06 1.02 6.87 -51.92 -0.36 0.67 16 43 H 0.07 1.18 8.14 -51.93 -0.42 0.76 16 44 H 0.05 0.73 8.14 -51.93 -0.42 0.30 16 LS Contribution 382.66 15.07 5.77 5.77 Total: -1.00 -30.85 382.66 -7.98 -38.82 By element: Atomic # 1 Polarization: 12.73 SS G_CDS: -6.41 Total: 6.32 kcal Atomic # 6 Polarization: -1.03 SS G_CDS: -1.43 Total: -2.46 kcal Atomic # 7 Polarization: -56.54 SS G_CDS: 0.36 Total: -56.18 kcal Atomic # 8 Polarization: -8.07 SS G_CDS: 0.28 Total: -7.79 kcal Atomic # 14 Polarization: 21.63 SS G_CDS: -5.02 Total: 16.61 kcal Atomic # 17 Polarization: 0.43 SS G_CDS: -1.52 Total: -1.08 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -30.85 -7.98 -38.82 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000987602385.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.282 kcal (2) G-P(sol) polarization free energy of solvation -30.846 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.436 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.978 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.824 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.458 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.76 seconds