Wall clock time and date at job start Sat Apr 11 2020 06:20:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 N 1.30216 * 126.78838 * 2 1 4 4 O 1.20921 * 111.64555 * 179.97438 * 3 2 1 5 5 C 1.34073 * 111.55203 * 359.75995 * 4 3 2 6 6 Cl 1.73593 * 126.79831 * 180.25773 * 5 4 3 7 7 C 1.35678 * 106.40416 * 0.38480 * 5 4 3 8 8 C 1.50704 * 128.01167 * 179.91069 * 7 5 4 9 9 C 1.50696 * 109.46832 * 269.67612 * 8 7 5 10 10 O 1.21282 * 120.00094 * 359.97438 * 9 8 7 11 11 N 1.34779 * 119.99529 * 180.02562 * 9 8 7 12 12 C 1.47483 * 127.03508 * 0.02562 * 11 9 8 13 13 C 1.54004 * 107.08427 * 205.41336 * 12 11 9 14 14 H 1.09002 * 110.32612 * 117.58996 * 13 12 11 15 15 N 1.46499 * 110.32826 * 239.70363 * 13 12 11 16 16 C 1.36939 * 120.00067 * 272.16553 * 15 13 12 17 17 H 1.08001 * 119.99735 * 359.97438 * 16 15 13 18 18 C 1.38803 * 120.00265 * 179.97438 * 16 15 13 19 19 N 1.31622 * 120.00427 * 179.97438 * 18 16 15 20 20 Si 1.86797 * 120.00089 * 359.97438 * 18 16 15 21 21 H 1.48499 * 109.47425 * 89.99915 * 20 18 16 22 22 H 1.48497 * 109.47638 * 209.99970 * 20 18 16 23 23 H 1.48500 * 109.47335 * 330.00029 * 20 18 16 24 24 C 1.54625 * 105.13368 * 358.64533 * 13 12 11 25 25 C 1.52999 * 110.73798 * 96.53892 * 24 13 12 26 26 C 1.52993 * 110.73731 * 219.86169 * 24 13 12 27 27 C 1.48117 * 127.03008 * 179.97438 * 11 9 8 28 28 H 1.08999 * 109.47052 * 270.02339 * 1 2 3 29 29 H 1.09007 * 109.47153 * 30.01914 * 1 2 3 30 30 H 1.08998 * 109.47411 * 150.02468 * 1 2 3 31 31 H 1.08999 * 109.46649 * 149.67259 * 8 7 5 32 32 H 1.09000 * 109.46807 * 29.67701 * 8 7 5 33 33 H 1.09001 * 109.91158 * 86.06000 * 12 11 9 34 34 H 1.08991 * 110.07287 * 324.86608 * 12 11 9 35 35 H 0.97000 * 119.99964 * 92.16169 * 15 13 12 36 36 H 0.96997 * 120.00530 * 179.97438 * 19 18 16 37 37 H 1.09000 * 109.47203 * 60.00020 * 25 24 13 38 38 H 1.08994 * 109.47146 * 179.97438 * 25 24 13 39 39 H 1.09002 * 109.47218 * 299.99746 * 25 24 13 40 40 H 1.09001 * 109.47019 * 60.00374 * 26 24 13 41 41 H 1.09000 * 109.46864 * 179.97438 * 26 24 13 42 42 H 1.08995 * 109.47592 * 300.00183 * 26 24 13 43 43 H 1.09001 * 110.66111 * 259.17821 * 27 11 9 44 44 H 1.08999 * 110.66710 * 22.13257 * 27 11 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2868 1.0428 0.0000 4 8 3.4540 0.7270 0.0005 5 6 3.6037 -0.6054 0.0061 6 17 5.1011 -1.4835 0.0151 7 6 2.3531 -1.1315 0.0006 8 6 1.9580 -2.5858 0.0016 9 6 1.8262 -3.0714 -1.4189 10 8 2.0322 -2.3113 -2.3412 11 7 1.4783 -4.3502 -1.6643 12 6 1.1919 -5.3996 -0.6684 13 6 1.4785 -6.7540 -1.3431 14 1 2.2840 -7.2730 -0.8236 15 7 0.2690 -7.5805 -1.3594 16 6 -0.0188 -8.3939 -0.2960 17 1 0.6461 -8.4264 0.5545 18 6 -1.1650 -9.1766 -0.3111 19 7 -1.4414 -9.9588 0.7108 20 14 -2.3154 -9.1199 -1.7816 21 1 -1.9021 -10.1450 -2.7734 22 1 -3.7044 -9.3955 -1.3346 23 1 -2.2544 -7.7741 -2.4063 24 6 1.9085 -6.4030 -2.7863 25 6 3.4336 -6.3622 -2.9024 26 6 1.3140 -7.3972 -3.7857 27 6 1.3042 -4.9887 -2.9894 28 1 -0.3633 0.0004 1.0277 29 1 -0.3634 0.8899 -0.5142 30 1 -0.3634 -0.8902 -0.5134 31 1 1.0040 -2.7027 0.5157 32 1 2.7217 -3.1694 0.5157 33 1 0.1458 -5.3494 -0.3664 34 1 1.8359 -5.2749 0.2021 35 1 -0.3280 -7.5515 -2.1233 36 1 -2.2425 -10.5055 0.7004 37 1 3.8441 -7.3373 -2.6402 38 1 3.7135 -6.1139 -3.9261 39 1 3.8296 -5.6068 -2.2237 40 1 0.2261 -7.3664 -3.7254 41 1 1.6293 -7.1307 -4.7945 42 1 1.6626 -8.4025 -3.5493 43 1 0.2475 -5.0569 -3.2476 44 1 1.8515 -4.4399 -3.7557 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000996406357.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:20:26 Heat of formation + Delta-G solvation = 45.296694 kcal Electronic energy + Delta-G solvation = -28207.219677 eV Core-core repulsion = 24189.838695 eV Total energy + Delta-G solvation = -4017.380982 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 341.129 amu Computer time = 1.64 seconds Orbital eigenvalues (eV) -45.26376 -40.19488 -38.27744 -37.44353 -35.51502 -34.24761 -33.35763 -32.56885 -31.19259 -29.48457 -28.85469 -28.18846 -27.02788 -26.02140 -23.79687 -22.41242 -21.71980 -21.49846 -19.32891 -18.90876 -18.08378 -17.86093 -17.66652 -16.82490 -16.14141 -15.50508 -15.34805 -14.76064 -14.49913 -14.19630 -13.94120 -13.70921 -13.61121 -13.30434 -13.11780 -12.93990 -12.91597 -12.66720 -12.60807 -12.41864 -12.16196 -12.11128 -12.04672 -11.81741 -11.60373 -11.25944 -11.13211 -11.07164 -10.70494 -10.58301 -10.40175 -10.26752 -9.99756 -9.87216 -9.66787 -9.40012 -9.10180 -8.49907 -7.45221 -5.90238 -3.27740 0.81329 0.99647 1.81299 2.65476 3.06923 3.26618 3.29327 3.36638 3.38684 3.78783 4.28008 4.46334 4.47900 4.57519 4.67579 4.87623 4.89449 5.02808 5.16589 5.23258 5.24889 5.31622 5.40487 5.43257 5.43694 5.51218 5.54052 5.72887 5.81576 5.82303 5.85769 5.94920 6.06179 6.11122 6.18082 6.22297 6.32123 6.42669 6.59454 6.68341 7.67404 7.83575 7.84715 8.19964 8.28589 9.05654 9.77909 9.96208 11.27512 Molecular weight = 341.13amu Principal moments of inertia in cm(-1) A = 0.015390 B = 0.003076 C = 0.002890 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1818.952536 B = 9101.114959 C = 9686.223600 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 C 0.046 3.954 3 N -0.349 5.349 4 O 0.108 5.892 5 C 0.012 3.988 6 Cl 0.049 6.951 7 C -0.146 4.146 8 C -0.065 4.065 9 C 0.533 3.467 10 O -0.544 6.544 11 N -0.613 5.613 12 C 0.071 3.929 13 C 0.182 3.818 14 H 0.076 0.924 15 N -0.739 5.739 16 C -0.251 4.251 17 H 0.092 0.908 18 C 0.011 3.989 19 N -0.929 5.929 20 Si 0.879 3.121 21 H -0.282 1.282 22 H -0.290 1.290 23 H -0.277 1.277 24 C -0.091 4.091 25 C -0.129 4.129 26 C -0.129 4.129 27 C 0.117 3.883 28 H 0.086 0.914 29 H 0.081 0.919 30 H 0.084 0.916 31 H 0.115 0.885 32 H 0.111 0.889 33 H 0.080 0.920 34 H 0.067 0.933 35 H 0.365 0.635 36 H 0.261 0.739 37 H 0.060 0.940 38 H 0.052 0.948 39 H 0.053 0.947 40 H 0.056 0.944 41 H 0.049 0.951 42 H 0.068 0.932 43 H 0.070 0.930 44 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.293 15.521 -2.529 18.266 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C -0.113 4.113 3 N -0.056 5.056 4 O 0.042 5.958 5 C -0.078 4.078 6 Cl 0.077 6.923 7 C -0.151 4.151 8 C -0.105 4.105 9 C 0.321 3.679 10 O -0.422 6.422 11 N -0.346 5.346 12 C -0.055 4.055 13 C 0.070 3.930 14 H 0.093 0.907 15 N -0.382 5.382 16 C -0.381 4.381 17 H 0.110 0.890 18 C -0.185 4.185 19 N -0.576 5.576 20 Si 0.709 3.291 21 H -0.209 1.209 22 H -0.216 1.216 23 H -0.204 1.204 24 C -0.093 4.093 25 C -0.186 4.186 26 C -0.186 4.186 27 C -0.005 4.005 28 H 0.104 0.896 29 H 0.099 0.901 30 H 0.103 0.897 31 H 0.133 0.867 32 H 0.129 0.871 33 H 0.099 0.901 34 H 0.086 0.914 35 H 0.201 0.799 36 H 0.071 0.929 37 H 0.079 0.921 38 H 0.071 0.929 39 H 0.072 0.928 40 H 0.075 0.925 41 H 0.068 0.932 42 H 0.087 0.913 43 H 0.088 0.912 44 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 9.324 17.094 -2.761 19.667 hybrid contribution -0.824 -0.973 -0.835 1.524 sum 8.500 16.122 -3.596 18.576 Atomic orbital electron populations 1.20238 0.85191 1.04441 1.03686 1.23250 0.99102 0.87689 1.01275 1.73910 0.88477 1.22852 1.20352 1.84894 1.22152 1.20531 1.68188 1.24462 0.90846 0.84947 1.07560 1.98455 1.28215 1.68964 1.96665 1.20135 0.90086 0.96854 1.08010 1.19956 1.05244 0.89260 0.96039 1.19862 0.76931 0.80499 0.90589 1.90707 1.51143 1.54203 1.46172 1.48781 1.67206 1.09155 1.09463 1.23458 1.01848 0.88529 0.91623 1.21048 0.90546 0.89215 0.92146 0.90656 1.42969 1.24239 1.49683 1.21353 1.19059 1.06385 1.15960 0.96702 0.89006 1.24649 0.98051 0.98685 0.97156 1.69687 1.27708 1.29860 1.30322 0.86662 0.81350 0.77665 0.83434 1.20853 1.21643 1.20358 1.21990 0.95891 0.94206 0.97168 1.21691 0.93748 1.01857 1.01319 1.21630 1.00766 0.99315 0.96927 1.22558 1.00497 0.92195 0.85293 0.89580 0.90061 0.89673 0.86728 0.87101 0.90140 0.91440 0.79938 0.92897 0.92100 0.92855 0.92819 0.92478 0.93181 0.91288 0.91223 0.90306 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 27. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.72 10.39 36.00 0.37 -0.34 16 2 C 0.05 0.55 7.32 -82.12 -0.60 -0.05 16 3 N -0.35 -4.66 12.07 33.44 0.40 -4.26 16 4 O 0.11 1.40 11.20 17.09 0.19 1.59 16 5 C 0.01 0.14 8.12 29.82 0.24 0.39 16 6 Cl 0.05 0.49 29.23 -51.86 -1.52 -1.02 16 7 C -0.15 -1.76 4.82 -104.38 -0.50 -2.26 16 8 C -0.06 -0.71 5.18 -29.03 -0.15 -0.86 16 9 C 0.53 7.49 7.89 -10.99 -0.09 7.40 16 10 O -0.54 -9.40 16.24 5.56 0.09 -9.31 16 11 N -0.61 -8.52 3.20 -169.65 -0.54 -9.07 16 12 C 0.07 1.02 6.55 -2.98 -0.02 1.01 16 13 C 0.18 2.96 3.10 -66.55 -0.21 2.75 16 14 H 0.08 1.26 7.82 -51.93 -0.41 0.86 16 15 N -0.74 -15.14 4.28 -52.09 -0.22 -15.36 16 16 C -0.25 -6.34 10.45 -15.06 -0.16 -6.50 16 17 H 0.09 2.48 8.06 -52.49 -0.42 2.06 16 18 C 0.01 0.30 5.50 -17.43 -0.10 0.21 16 19 N -0.93 -27.37 13.97 55.49 0.78 -26.60 16 20 Si 0.88 20.55 27.73 -169.99 -4.71 15.84 16 21 H -0.28 -6.58 7.11 56.52 0.40 -6.17 16 22 H -0.29 -6.99 7.11 56.52 0.40 -6.59 16 23 H -0.28 -6.07 6.52 56.52 0.37 -5.70 16 24 C -0.09 -1.25 0.94 -152.53 -0.14 -1.40 16 25 C -0.13 -1.56 8.50 37.16 0.32 -1.24 16 26 C -0.13 -1.79 7.84 37.15 0.29 -1.50 16 27 C 0.12 1.64 5.99 -2.03 -0.01 1.63 16 28 H 0.09 0.62 8.14 -51.93 -0.42 0.20 16 29 H 0.08 0.70 8.14 -51.93 -0.42 0.28 16 30 H 0.08 0.77 8.14 -51.93 -0.42 0.35 16 31 H 0.11 1.05 8.14 -51.93 -0.42 0.63 16 32 H 0.11 1.04 7.92 -51.93 -0.41 0.63 16 33 H 0.08 1.30 7.92 -51.93 -0.41 0.89 16 34 H 0.07 0.85 7.55 -51.93 -0.39 0.45 16 35 H 0.37 7.48 3.44 -40.82 -0.14 7.34 16 36 H 0.26 7.38 8.31 -40.82 -0.34 7.04 16 37 H 0.06 0.72 8.14 -51.93 -0.42 0.30 16 38 H 0.05 0.59 8.14 -51.93 -0.42 0.17 16 39 H 0.05 0.65 8.07 -51.93 -0.42 0.24 16 40 H 0.06 0.86 6.25 -51.93 -0.32 0.54 16 41 H 0.05 0.59 8.14 -51.93 -0.42 0.16 16 42 H 0.07 1.02 8.14 -51.93 -0.42 0.60 16 43 H 0.07 1.00 8.02 -51.93 -0.42 0.59 16 44 H 0.08 1.11 7.77 -51.93 -0.40 0.70 16 LS Contribution 377.48 15.07 5.69 5.69 Total: -1.00 -30.82 377.48 -6.90 -37.72 By element: Atomic # 1 Polarization: 11.85 SS G_CDS: -6.30 Total: 5.55 kcal Atomic # 6 Polarization: -0.01 SS G_CDS: -0.75 Total: -0.76 kcal Atomic # 7 Polarization: -55.70 SS G_CDS: 0.41 Total: -55.28 kcal Atomic # 8 Polarization: -8.00 SS G_CDS: 0.28 Total: -7.72 kcal Atomic # 14 Polarization: 20.55 SS G_CDS: -4.71 Total: 15.84 kcal Atomic # 17 Polarization: 0.49 SS G_CDS: -1.52 Total: -1.02 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -30.82 -6.90 -37.72 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000996406357.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 83.012 kcal (2) G-P(sol) polarization free energy of solvation -30.819 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.193 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.897 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.715 kcal (6) G-S(sol) free energy of system = (1) + (5) 45.297 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.65 seconds