Wall clock time and date at job start Sat Apr 11 2020 06:17:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 N 1.30214 * 126.78872 * 2 1 4 4 O 1.20923 * 111.64524 * 180.26327 * 3 2 1 5 5 C 1.34064 * 111.55043 * 359.73511 * 4 3 2 6 6 Cl 1.73600 * 126.79770 * 179.97438 * 5 4 3 7 7 C 1.35673 * 106.40810 * 359.97438 * 5 4 3 8 8 C 1.50703 * 128.01499 * 179.97438 * 7 5 4 9 9 C 1.52996 * 109.46961 * 90.03145 * 8 7 5 10 10 C 1.50699 * 109.47268 * 179.97438 * 9 8 7 11 11 O 1.21285 * 119.99616 * 0.02562 * 10 9 8 12 12 N 1.34779 * 119.99969 * 179.97438 * 10 9 8 13 13 C 1.46499 * 119.99846 * 180.02562 * 12 10 9 14 14 H 1.09004 * 112.85161 * 336.19663 * 13 12 10 15 15 C 1.53774 * 113.61681 * 107.49921 * 13 12 10 16 16 C 1.53791 * 87.07790 * 89.11919 * 15 13 12 17 17 H 1.09001 * 113.68682 * 270.87041 * 16 15 13 18 18 C 1.53001 * 113.61290 * 139.98683 * 16 15 13 19 19 N 1.46496 * 109.47205 * 87.50343 * 18 16 15 20 20 C 1.36945 * 119.99718 * 179.97438 * 19 18 16 21 21 H 1.07997 * 119.99756 * 359.97438 * 20 19 18 22 22 C 1.38805 * 119.99878 * 179.97438 * 20 19 18 23 23 N 1.31624 * 120.00257 * 0.02562 * 22 20 19 24 24 Si 1.86803 * 119.99929 * 179.97438 * 22 20 19 25 25 H 1.48498 * 109.47174 * 270.00277 * 24 22 20 26 26 H 1.48501 * 109.47062 * 30.00228 * 24 22 20 27 27 H 1.48499 * 109.46981 * 150.00382 * 24 22 20 28 28 C 1.53781 * 113.61613 * 205.00474 * 13 12 10 29 29 H 1.09006 * 109.46998 * 270.18422 * 1 2 3 30 30 H 1.09002 * 109.47059 * 30.18206 * 1 2 3 31 31 H 1.08997 * 109.47575 * 150.17977 * 1 2 3 32 32 H 1.08997 * 109.47030 * 330.02972 * 8 7 5 33 33 H 1.09004 * 109.47231 * 210.02961 * 8 7 5 34 34 H 1.09002 * 109.47108 * 60.00430 * 9 8 7 35 35 H 1.08996 * 109.47311 * 300.00511 * 9 8 7 36 36 H 0.96993 * 120.00347 * 0.02562 * 12 10 9 37 37 H 1.08995 * 113.61727 * 334.57470 * 15 13 12 38 38 H 1.08997 * 113.62284 * 203.66078 * 15 13 12 39 39 H 1.08997 * 109.46922 * 327.49385 * 18 16 15 40 40 H 1.09000 * 109.46483 * 207.50204 * 18 16 15 41 41 H 0.96996 * 120.00499 * 359.97438 * 19 18 16 42 42 H 0.97001 * 119.99885 * 179.97438 * 23 22 20 43 43 H 1.08996 * 113.61658 * 156.33602 * 28 13 12 44 44 H 1.08999 * 113.69080 * 25.43952 * 28 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 7 2.2867 1.0428 0.0000 4 8 3.4540 0.7269 -0.0052 5 6 3.6036 -0.6053 -0.0036 6 17 5.1011 -1.4836 -0.0101 7 6 2.3530 -1.1314 0.0040 8 6 1.9579 -2.5857 0.0081 9 6 1.8314 -3.0757 1.4520 10 6 1.4357 -4.5298 1.4562 11 8 1.2716 -5.1166 0.4075 12 7 1.2653 -5.1784 2.6253 13 6 0.8811 -6.5921 2.6293 14 1 0.3740 -6.8956 1.7134 15 6 2.0186 -7.5384 3.0483 16 6 1.5372 -7.3484 4.4965 17 1 2.0018 -6.5038 5.0052 18 6 1.5701 -8.6332 5.3267 19 7 2.8934 -8.7871 5.9360 20 6 3.1600 -9.8711 6.7294 21 1 2.3945 -10.6121 6.9062 22 6 4.4140 -10.0173 7.3062 23 7 5.3468 -9.1139 7.0911 24 14 4.7774 -11.4954 8.3890 25 1 4.4407 -11.1712 9.7985 26 1 3.9615 -12.6515 7.9385 27 1 6.2189 -11.8385 8.2908 28 6 0.1517 -7.0286 3.9108 29 1 -0.3633 0.0033 1.0277 30 1 -0.3633 0.8884 -0.5167 31 1 -0.3634 -0.8915 -0.5110 32 1 2.7189 -3.1704 -0.5087 33 1 1.0012 -2.7038 -0.5008 34 1 1.0703 -2.4910 1.9687 35 1 2.7880 -2.9575 1.9609 36 1 1.3969 -4.7092 3.4639 37 1 3.0136 -7.1342 2.8624 38 1 1.8983 -8.5565 2.6783 39 1 1.3651 -9.4877 4.6820 40 1 0.8137 -8.5791 6.1097 41 1 3.5808 -8.1214 5.7775 42 1 6.2230 -9.2159 7.4946 43 1 -0.4790 -7.9074 3.7765 44 1 -0.3610 -6.2139 4.4221 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001725369275.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:17:01 Heat of formation + Delta-G solvation = 41.870608 kcal Electronic energy + Delta-G solvation = -26179.638112 eV Core-core repulsion = 22162.108564 eV Total energy + Delta-G solvation = -4017.529548 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 341.129 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -45.50712 -40.30853 -38.52562 -37.65074 -36.23640 -34.55932 -33.59942 -33.13114 -31.15345 -30.67916 -29.23159 -27.06382 -25.66081 -25.52029 -23.35848 -22.11439 -21.84969 -21.41189 -20.63602 -19.10289 -18.33599 -18.14881 -17.31574 -17.00323 -16.19040 -15.96060 -15.45657 -14.90040 -14.67836 -14.33740 -14.07175 -13.90975 -13.81061 -13.50927 -13.34506 -13.20884 -13.11216 -13.00018 -12.75876 -12.63592 -12.35097 -12.25859 -12.13079 -11.70204 -11.60106 -11.21959 -11.04405 -10.83729 -10.51231 -10.43777 -10.35900 -10.10325 -10.02883 -9.85017 -9.64242 -9.59227 -9.04817 -8.85069 -6.90792 -5.76554 -3.04749 0.64841 0.74164 1.57459 2.47504 2.96878 3.18402 3.43196 3.48290 3.50104 3.56184 4.06755 4.31920 4.38436 4.57287 4.59995 4.65335 4.77020 4.83284 4.87149 5.00793 5.08526 5.09489 5.12886 5.16372 5.23391 5.50359 5.57460 5.57878 5.70475 5.75097 5.84606 5.91598 5.99524 6.09471 6.22096 6.29466 6.40849 6.60986 6.77363 6.92441 7.38520 7.60133 7.69872 8.08659 8.42813 9.53744 10.12851 10.47141 11.46444 Molecular weight = 341.13amu Principal moments of inertia in cm(-1) A = 0.015240 B = 0.001929 C = 0.001782 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1836.866055 B =14514.495204 C =15709.848169 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 C 0.034 3.966 3 N -0.348 5.348 4 O 0.110 5.890 5 C 0.001 3.999 6 Cl 0.054 6.946 7 C -0.167 4.167 8 C -0.029 4.029 9 C -0.138 4.138 10 C 0.517 3.483 11 O -0.541 6.541 12 N -0.709 5.709 13 C 0.115 3.885 14 H 0.099 0.901 15 C -0.138 4.138 16 C -0.113 4.113 17 H 0.087 0.913 18 C 0.162 3.838 19 N -0.732 5.732 20 C -0.238 4.238 21 H 0.070 0.930 22 C -0.016 4.016 23 N -0.934 5.934 24 Si 0.907 3.093 25 H -0.290 1.290 26 H -0.282 1.282 27 H -0.291 1.291 28 C -0.138 4.138 29 H 0.085 0.915 30 H 0.080 0.920 31 H 0.087 0.913 32 H 0.091 0.909 33 H 0.093 0.907 34 H 0.096 0.904 35 H 0.097 0.903 36 H 0.402 0.598 37 H 0.068 0.932 38 H 0.090 0.910 39 H 0.020 0.980 40 H 0.018 0.982 41 H 0.383 0.617 42 H 0.255 0.745 43 H 0.094 0.906 44 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.712 20.059 -16.107 27.498 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C -0.125 4.125 3 N -0.054 5.054 4 O 0.043 5.957 5 C -0.089 4.089 6 Cl 0.083 6.917 7 C -0.172 4.172 8 C -0.067 4.067 9 C -0.178 4.178 10 C 0.303 3.697 11 O -0.419 6.419 12 N -0.359 5.359 13 C 0.010 3.990 14 H 0.117 0.883 15 C -0.177 4.177 16 C -0.132 4.132 17 H 0.105 0.895 18 C 0.034 3.966 19 N -0.376 5.376 20 C -0.370 4.370 21 H 0.088 0.912 22 C -0.211 4.211 23 N -0.583 5.583 24 Si 0.738 3.262 25 H -0.218 1.218 26 H -0.208 1.208 27 H -0.218 1.218 28 C -0.177 4.177 29 H 0.104 0.896 30 H 0.099 0.901 31 H 0.106 0.894 32 H 0.110 0.890 33 H 0.111 0.889 34 H 0.115 0.885 35 H 0.116 0.884 36 H 0.237 0.763 37 H 0.087 0.913 38 H 0.109 0.891 39 H 0.038 0.962 40 H 0.036 0.964 41 H 0.216 0.784 42 H 0.064 0.936 43 H 0.112 0.888 44 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -9.932 20.706 -16.779 28.442 hybrid contribution 0.936 -1.184 1.156 1.901 sum -8.996 19.522 -15.624 26.574 Atomic orbital electron populations 1.20256 0.85092 1.04341 1.03948 1.23372 0.99212 0.87823 1.02083 1.73967 0.88561 1.23004 1.19827 1.84928 1.22079 1.20772 1.67938 1.24683 0.91322 0.84916 1.07935 1.98486 1.27958 1.68694 1.96612 1.20873 0.89802 0.98328 1.08149 1.19695 1.04233 0.86565 0.96188 1.21641 1.04318 0.93199 0.98631 1.20505 0.76641 0.88759 0.83769 1.90713 1.50797 1.68974 1.31367 1.45710 1.70160 1.11491 1.08566 1.21948 0.97349 0.80343 0.99373 0.88288 1.23407 0.98404 0.99682 0.96217 1.22760 0.95264 0.99765 0.95409 0.89450 1.20639 0.89233 0.92956 0.93730 1.42347 1.09523 1.27750 1.57966 1.19245 0.96483 1.00127 1.21113 0.91236 1.24743 0.96342 0.98739 1.01322 1.69661 1.04212 1.35675 1.48778 0.86188 0.77201 0.82299 0.80508 1.21750 1.20775 1.21781 1.23310 0.97255 1.01564 0.95545 0.89606 0.90112 0.89426 0.89034 0.88902 0.88528 0.88421 0.76337 0.91338 0.89145 0.96220 0.96435 0.78353 0.93558 0.88752 0.91293 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.40 10.39 36.00 0.37 -0.03 16 2 C 0.03 0.27 7.32 -82.13 -0.60 -0.33 16 3 N -0.35 -3.49 12.07 33.43 0.40 -3.09 16 4 O 0.11 1.08 11.20 17.11 0.19 1.27 16 5 C 0.00 0.01 8.12 29.81 0.24 0.25 16 6 Cl 0.05 0.42 29.23 -51.86 -1.52 -1.09 16 7 C -0.17 -1.34 5.58 -104.38 -0.58 -1.92 16 8 C -0.03 -0.22 4.90 -27.88 -0.14 -0.36 16 9 C -0.14 -0.99 5.68 -27.89 -0.16 -1.15 16 10 C 0.52 5.43 7.83 -10.99 -0.09 5.34 16 11 O -0.54 -7.66 15.58 5.55 0.09 -7.57 16 12 N -0.71 -7.09 5.26 -53.02 -0.28 -7.37 16 13 C 0.12 1.35 4.32 -67.12 -0.29 1.06 16 14 H 0.10 1.24 7.47 -51.93 -0.39 0.86 16 15 C -0.14 -1.98 7.43 -25.92 -0.19 -2.17 16 16 C -0.11 -1.68 3.63 -89.80 -0.33 -2.01 16 17 H 0.09 1.32 8.14 -51.93 -0.42 0.90 16 18 C 0.16 3.16 6.10 -4.04 -0.02 3.14 16 19 N -0.73 -18.43 5.60 -59.91 -0.34 -18.76 16 20 C -0.24 -6.70 9.99 -15.06 -0.15 -6.85 16 21 H 0.07 1.90 7.83 -52.49 -0.41 1.48 16 22 C -0.02 -0.45 5.50 -17.43 -0.10 -0.55 16 23 N -0.93 -28.31 13.06 55.49 0.72 -27.58 16 24 Si 0.91 22.45 29.55 -169.99 -5.02 17.43 16 25 H -0.29 -7.13 7.11 56.52 0.40 -6.73 16 26 H -0.28 -6.79 7.11 56.52 0.40 -6.39 16 27 H -0.29 -7.27 7.11 56.52 0.40 -6.87 16 28 C -0.14 -1.57 7.39 -25.92 -0.19 -1.76 16 29 H 0.09 0.34 8.14 -51.93 -0.42 -0.08 16 30 H 0.08 0.37 8.14 -51.93 -0.42 -0.05 16 31 H 0.09 0.34 7.65 -51.93 -0.40 -0.06 16 32 H 0.09 0.79 8.10 -51.93 -0.42 0.36 16 33 H 0.09 0.68 7.60 -51.93 -0.39 0.28 16 34 H 0.10 0.51 8.14 -51.93 -0.42 0.08 16 35 H 0.10 0.65 8.14 -51.93 -0.42 0.23 16 36 H 0.40 3.22 8.70 -40.82 -0.36 2.86 16 37 H 0.07 1.06 8.14 -51.93 -0.42 0.63 16 38 H 0.09 1.33 7.90 -51.93 -0.41 0.92 16 39 H 0.02 0.39 7.84 -51.93 -0.41 -0.01 16 40 H 0.02 0.35 8.14 -51.93 -0.42 -0.07 16 41 H 0.38 10.13 7.67 -40.82 -0.31 9.81 16 42 H 0.25 7.46 8.31 -40.82 -0.34 7.12 16 43 H 0.09 1.03 8.10 -51.93 -0.42 0.61 16 44 H 0.07 0.69 8.14 -51.93 -0.42 0.26 16 LS Contribution 389.36 15.07 5.87 5.87 Total: -1.00 -33.52 389.36 -8.53 -42.06 By element: Atomic # 1 Polarization: 12.58 SS G_CDS: -6.43 Total: 6.15 kcal Atomic # 6 Polarization: -5.09 SS G_CDS: -2.22 Total: -7.31 kcal Atomic # 7 Polarization: -57.31 SS G_CDS: 0.51 Total: -56.80 kcal Atomic # 8 Polarization: -6.58 SS G_CDS: 0.28 Total: -6.30 kcal Atomic # 14 Polarization: 22.45 SS G_CDS: -5.02 Total: 17.43 kcal Atomic # 17 Polarization: 0.42 SS G_CDS: -1.52 Total: -1.09 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -33.52 -8.53 -42.06 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001725369275.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 83.929 kcal (2) G-P(sol) polarization free energy of solvation -33.524 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.405 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.535 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.058 kcal (6) G-S(sol) free energy of system = (1) + (5) 41.871 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds