Wall clock time and date at job start Sat Apr 11 2020 06:17:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46902 * 111.00146 * 2 1 4 4 C 1.50697 * 109.47374 * 66.04007 * 3 2 1 5 5 H 1.08001 * 120.00300 * 0.02562 * 4 3 2 6 6 C 1.37880 * 119.99847 * 179.97438 * 4 3 2 7 7 N 1.31520 * 120.00226 * 0.02562 * 6 4 3 8 8 Si 1.86801 * 119.99871 * 179.97438 * 6 4 3 9 9 H 1.48495 * 109.47122 * 0.02562 * 8 6 4 10 10 H 1.48503 * 109.46867 * 120.00591 * 8 6 4 11 11 H 1.48498 * 109.47008 * 240.00039 * 8 6 4 12 12 C 1.46894 * 111.00160 * 236.03698 * 2 1 3 13 13 C 1.52991 * 109.47572 * 293.95831 * 12 2 1 14 14 H 1.09000 * 109.47000 * 59.99588 * 13 12 2 15 15 O 1.42905 * 109.47115 * 300.00203 * 13 12 2 16 16 C 1.53000 * 109.47589 * 179.97438 * 13 12 2 17 17 N 1.46497 * 109.47323 * 184.99893 * 16 13 12 18 18 N 1.28382 * 119.16638 * 270.01945 * 17 16 13 19 19 C 1.30486 * 122.44075 * 179.97438 * 18 17 16 20 20 Cl 1.73595 * 119.78477 * 180.02562 * 19 18 17 21 21 C 1.40595 * 120.43427 * 359.73518 * 19 18 17 22 22 C 1.36570 * 118.30955 * 0.53001 * 21 19 18 23 23 C 1.50706 * 121.09335 * 179.75097 * 22 21 19 24 24 C 1.52990 * 117.49906 * 108.97543 * 23 22 21 25 25 C 1.52997 * 60.03376 * 252.52277 * 24 23 22 26 26 C 1.34670 * 119.16005 * 90.00128 * 17 16 13 27 27 O 1.22066 * 120.33935 * 0.04317 * 26 17 16 28 28 H 1.08993 * 109.47300 * 183.95859 * 1 2 3 29 29 H 1.08997 * 109.47017 * 303.96310 * 1 2 3 30 30 H 1.09005 * 109.46383 * 63.95594 * 1 2 3 31 31 H 1.09000 * 109.47063 * 186.04460 * 3 2 1 32 32 H 1.08999 * 109.46886 * 306.03783 * 3 2 1 33 33 H 0.96997 * 119.99921 * 180.02562 * 7 6 4 34 34 H 1.09006 * 109.46869 * 173.95492 * 12 2 1 35 35 H 1.08997 * 109.46976 * 53.95960 * 12 2 1 36 36 H 0.96707 * 113.99839 * 299.99688 * 15 13 12 37 37 H 1.09005 * 109.47206 * 64.99842 * 16 13 12 38 38 H 1.09000 * 109.46698 * 304.99839 * 16 13 12 39 39 H 1.08005 * 120.84556 * 180.28401 * 21 19 18 40 40 H 1.09002 * 115.55799 * 254.66675 * 23 22 21 41 41 H 1.09002 * 117.50050 * 145.02048 * 24 23 22 42 42 H 1.08999 * 117.50296 * 0.02602 * 24 23 22 43 43 H 1.09000 * 117.50202 * 107.47963 * 25 24 23 44 44 H 1.09002 * 117.50007 * 252.48136 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.6369 2.0472 1.2983 5 1 1.0745 1.5115 2.0487 6 6 2.0277 3.3493 1.5287 7 7 2.7130 4.0016 0.6152 8 14 1.5826 4.1872 3.1378 9 1 0.8144 3.2450 3.9906 10 1 2.8240 4.5938 3.8441 11 1 0.7561 5.3888 2.8580 12 6 1.9955 -0.7661 -1.1374 13 6 1.6315 -2.2427 -0.9701 14 1 0.5472 -2.3475 -0.9321 15 8 2.2008 -2.7391 0.2430 16 6 2.1793 -3.0405 -2.1551 17 7 1.7300 -4.4314 -2.0568 18 7 2.4539 -5.2793 -1.4202 19 6 2.1150 -6.5329 -1.2928 20 17 3.1461 -7.6201 -0.4163 21 6 0.9173 -7.0076 -1.8557 22 6 0.1314 -6.1275 -2.5433 23 6 -1.1625 -6.5701 -3.1768 24 6 -2.4646 -6.0820 -2.5388 25 6 -2.0397 -7.5438 -2.3859 26 6 0.5679 -4.7881 -2.6364 27 8 -0.1011 -3.9619 -3.2362 28 1 -0.3633 -1.0251 0.0709 29 1 -0.3633 0.5741 0.8523 30 1 -0.3632 0.4512 -0.9234 31 1 3.0798 1.3444 -0.1082 32 1 1.5613 1.9273 -0.8310 33 1 2.9882 4.9175 0.7774 34 1 3.0798 -0.6612 -1.1754 35 1 1.5612 -0.3875 -2.0626 36 1 3.1652 -2.6771 0.2791 37 1 3.2688 -3.0088 -2.1419 38 1 1.8143 -2.6057 -3.0856 39 1 0.6281 -8.0429 -1.7505 40 1 -1.1426 -6.6772 -4.2613 41 1 -3.3015 -5.8680 -3.2036 42 1 -2.3855 -5.4404 -1.6612 43 1 -1.6806 -7.8639 -1.4078 44 1 -2.5972 -8.2916 -2.9499 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000876499337.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:17:46 Heat of formation + Delta-G solvation = 11.295090 kcal Electronic energy + Delta-G solvation = -27474.184723 eV Core-core repulsion = 23455.329321 eV Total energy + Delta-G solvation = -4018.855402 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 341.129 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -42.46982 -38.52258 -38.25278 -37.57189 -37.01599 -35.60228 -34.23419 -32.54484 -31.69240 -30.16464 -27.57292 -26.82722 -25.75463 -24.80584 -23.77713 -22.61915 -21.90787 -21.27498 -20.27198 -18.88406 -17.98979 -17.08268 -16.84087 -16.52369 -16.06978 -15.83157 -15.68330 -15.07453 -14.87286 -14.68758 -14.27533 -13.87665 -13.80283 -13.72196 -13.59882 -12.77234 -12.52778 -12.41352 -12.17510 -11.97449 -11.89880 -11.88228 -11.46608 -11.39556 -11.25653 -11.21224 -10.91122 -10.83931 -10.74175 -10.67829 -10.48481 -10.31278 -10.02864 -10.00950 -9.70812 -9.17587 -8.59622 -8.44676 -7.24515 -6.03595 -4.04442 0.09592 1.05070 1.15302 2.17693 2.94648 3.31279 3.35686 3.38627 3.44337 3.71976 4.01728 4.27705 4.32459 4.46912 4.53112 4.53764 4.58868 4.68155 4.80799 5.09168 5.14461 5.21881 5.25091 5.31614 5.32235 5.36897 5.41705 5.52572 5.55512 5.65077 5.69298 5.79130 5.98675 6.13676 6.19977 6.34026 6.75884 7.23499 7.26712 7.30684 7.73890 7.78362 7.88429 8.06348 8.16912 8.52605 9.03732 9.59875 11.07456 Molecular weight = 341.13amu Principal moments of inertia in cm(-1) A = 0.015401 B = 0.002485 C = 0.002304 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1817.655165 B =11263.042715 C =12148.801536 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 N -0.528 5.528 3 C 0.192 3.808 4 C -0.505 4.505 5 H 0.064 0.936 6 C 0.054 3.946 7 N -0.900 5.900 8 Si 0.898 3.102 9 H -0.272 1.272 10 H -0.284 1.284 11 H -0.285 1.285 12 C 0.028 3.972 13 C 0.101 3.899 14 H 0.101 0.899 15 O -0.537 6.537 16 C 0.076 3.924 17 N -0.319 5.319 18 N -0.191 5.191 19 C 0.097 3.903 20 Cl 0.004 6.996 21 C -0.060 4.060 22 C -0.113 4.113 23 C -0.102 4.102 24 C -0.155 4.155 25 C -0.172 4.172 26 C 0.481 3.519 27 O -0.511 6.511 28 H 0.044 0.956 29 H 0.076 0.924 30 H 0.010 0.990 31 H 0.029 0.971 32 H -0.009 1.009 33 H 0.260 0.740 34 H 0.075 0.925 35 H 0.034 0.966 36 H 0.374 0.626 37 H 0.108 0.892 38 H 0.117 0.883 39 H 0.159 0.841 40 H 0.124 0.876 41 H 0.102 0.898 42 H 0.096 0.904 43 H 0.098 0.902 44 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.164 -27.107 -8.608 28.616 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 N -0.252 5.252 3 C 0.068 3.932 4 C -0.543 4.543 5 H 0.083 0.917 6 C -0.147 4.147 7 N -0.540 5.540 8 Si 0.726 3.274 9 H -0.196 1.196 10 H -0.210 1.210 11 H -0.211 1.211 12 C -0.102 4.102 13 C 0.040 3.960 14 H 0.119 0.881 15 O -0.341 6.341 16 C -0.044 4.044 17 N -0.140 5.140 18 N -0.018 5.018 19 C -0.100 4.100 20 Cl 0.031 6.969 21 C -0.084 4.084 22 C -0.126 4.126 23 C -0.120 4.120 24 C -0.192 4.192 25 C -0.209 4.209 26 C 0.278 3.722 27 O -0.388 6.388 28 H 0.063 0.937 29 H 0.095 0.905 30 H 0.029 0.971 31 H 0.047 0.953 32 H 0.008 0.992 33 H 0.070 0.930 34 H 0.094 0.906 35 H 0.052 0.948 36 H 0.221 0.779 37 H 0.127 0.873 38 H 0.135 0.865 39 H 0.176 0.824 40 H 0.142 0.858 41 H 0.121 0.879 42 H 0.114 0.886 43 H 0.116 0.884 44 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -3.203 -26.199 -8.139 27.621 hybrid contribution -0.244 0.591 -0.290 0.702 sum -3.447 -25.608 -8.429 27.179 Atomic orbital electron populations 1.22249 0.88853 0.99521 1.00579 1.62016 1.06955 1.17522 1.38678 1.19762 0.95310 0.81398 0.96771 1.21195 1.34649 0.96856 1.01633 0.91740 1.24994 0.95312 0.97345 0.97040 1.69968 1.38529 1.11437 1.34047 0.86435 0.78171 0.79285 0.83515 1.19617 1.20992 1.21131 1.22615 1.00841 0.92594 0.94135 1.22251 0.98997 0.91918 0.82819 0.88148 1.86623 1.25476 1.84752 1.37251 1.23046 1.02422 0.75869 1.03095 1.46618 1.17049 1.09728 1.40627 1.70350 1.23026 1.01024 1.07425 1.21825 0.94572 0.89539 1.04016 1.98424 1.66834 1.57954 1.73668 1.21977 0.91053 1.02066 0.93283 1.20556 0.98336 0.92068 1.01609 1.20509 0.87361 1.05467 0.98696 1.22939 0.96672 0.96567 1.03070 1.23113 1.02682 0.93458 1.01621 1.17876 0.81892 0.90374 0.82016 1.91015 1.52994 1.52578 1.42188 0.93720 0.90550 0.97104 0.95251 0.99163 0.92991 0.90638 0.94767 0.77920 0.87336 0.86510 0.82388 0.85806 0.87938 0.88574 0.88395 0.87877 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.75 9.14 60.07 0.55 1.30 16 2 N -0.53 -11.42 4.62 -244.38 -1.13 -12.55 16 3 C 0.19 5.01 4.72 -4.98 -0.02 4.99 16 4 C -0.50 -14.31 8.46 -34.44 -0.29 -14.60 16 5 H 0.06 1.83 7.12 -52.49 -0.37 1.46 16 6 C 0.05 1.55 5.46 -17.82 -0.10 1.45 16 7 N -0.90 -26.82 13.29 55.43 0.74 -26.08 16 8 Si 0.90 21.85 29.54 -169.99 -5.02 16.83 16 9 H -0.27 -6.52 7.11 56.52 0.40 -6.11 16 10 H -0.28 -6.83 7.11 56.52 0.40 -6.43 16 11 H -0.29 -6.86 7.11 56.52 0.40 -6.46 16 12 C 0.03 0.48 4.62 -3.83 -0.02 0.46 16 13 C 0.10 1.49 3.08 -26.74 -0.08 1.40 16 14 H 0.10 1.67 6.55 -51.93 -0.34 1.33 16 15 O -0.54 -8.36 13.05 -35.23 -0.46 -8.82 16 16 C 0.08 0.90 5.20 -4.04 -0.02 0.88 16 17 N -0.32 -3.97 3.17 -63.33 -0.20 -4.18 16 18 N -0.19 -2.24 10.77 33.01 0.36 -1.88 16 19 C 0.10 0.95 7.37 -17.23 -0.13 0.82 16 20 Cl 0.00 0.03 29.13 -51.86 -1.51 -1.48 16 21 C -0.06 -0.50 9.19 -39.30 -0.36 -0.86 16 22 C -0.11 -1.16 5.49 -104.11 -0.57 -1.73 16 23 C -0.10 -0.86 5.58 -91.74 -0.51 -1.37 16 24 C -0.16 -1.32 10.23 -26.74 -0.27 -1.59 16 25 C -0.17 -1.06 9.81 -26.70 -0.26 -1.33 16 26 C 0.48 6.34 7.46 -15.19 -0.11 6.22 16 27 O -0.51 -8.04 16.16 4.86 0.08 -7.97 16 28 H 0.04 0.82 6.47 -51.93 -0.34 0.49 16 29 H 0.08 1.67 6.76 -51.93 -0.35 1.32 16 30 H 0.01 0.21 8.14 -51.93 -0.42 -0.21 16 31 H 0.03 0.80 7.93 -51.93 -0.41 0.39 16 32 H -0.01 -0.26 8.12 -51.93 -0.42 -0.68 16 33 H 0.26 7.32 8.31 -40.82 -0.34 6.98 16 34 H 0.08 1.20 7.93 -51.93 -0.41 0.79 16 35 H 0.03 0.57 8.12 -51.93 -0.42 0.15 16 36 H 0.37 4.73 9.05 45.56 0.41 5.14 16 37 H 0.11 1.05 8.14 -51.93 -0.42 0.63 16 38 H 0.12 1.36 7.37 -51.93 -0.38 0.98 16 39 H 0.16 0.81 7.73 -52.48 -0.41 0.41 16 40 H 0.12 0.96 8.14 -51.93 -0.42 0.53 16 41 H 0.10 0.77 8.14 -51.93 -0.42 0.34 16 42 H 0.10 0.96 8.14 -51.93 -0.42 0.53 16 43 H 0.10 0.55 7.76 -51.93 -0.40 0.15 16 44 H 0.10 0.47 8.14 -51.93 -0.42 0.04 16 LS Contribution 384.92 15.07 5.80 5.80 Total: -1.00 -33.43 384.92 -9.07 -42.51 By element: Atomic # 1 Polarization: 7.29 SS G_CDS: -5.52 Total: 1.77 kcal Atomic # 6 Polarization: -1.76 SS G_CDS: -2.20 Total: -3.96 kcal Atomic # 7 Polarization: -44.45 SS G_CDS: -0.24 Total: -44.69 kcal Atomic # 8 Polarization: -16.40 SS G_CDS: -0.38 Total: -16.78 kcal Atomic # 14 Polarization: 21.85 SS G_CDS: -5.02 Total: 16.83 kcal Atomic # 17 Polarization: 0.03 SS G_CDS: -1.51 Total: -1.48 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -33.43 -9.07 -42.51 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000876499337.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.802 kcal (2) G-P(sol) polarization free energy of solvation -33.434 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.368 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.073 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.507 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.295 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds