Wall clock time and date at job start Sat Apr 11 2020 06:18:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 N 1.46503 * 109.47029 * 2 1 4 4 C 1.35634 * 125.67609 * 257.28323 * 3 2 1 5 5 C 1.35519 * 108.84867 * 180.02562 * 4 3 2 6 6 Cl 1.73603 * 126.07227 * 180.02562 * 5 4 3 7 7 C 1.39887 * 107.85119 * 359.77954 * 5 4 3 8 8 C 1.37638 * 125.67409 * 77.32823 * 3 2 1 9 9 C 1.46667 * 126.22229 * 359.92935 * 8 3 2 10 10 O 1.21701 * 119.99532 * 173.91053 * 9 8 3 11 11 N 1.34777 * 120.00249 * 353.90613 * 9 8 3 12 12 C 1.46503 * 119.99944 * 183.97449 * 11 9 8 13 13 C 1.53002 * 109.46874 * 185.12853 * 12 11 9 14 14 H 1.09007 * 109.70824 * 305.54453 * 13 12 11 15 15 C 1.53288 * 109.68109 * 66.07971 * 13 12 11 16 16 O 1.42966 * 109.22001 * 172.02342 * 15 13 12 17 17 C 1.42955 * 114.16707 * 297.42107 * 16 15 13 18 18 C 1.53293 * 109.22251 * 62.58271 * 17 16 15 19 19 N 1.47145 * 109.67922 * 185.00977 * 13 12 11 20 20 C 1.36940 * 120.98379 * 9.71746 * 19 13 12 21 21 H 1.07994 * 120.00339 * 324.96564 * 20 19 13 22 22 C 1.38815 * 119.99819 * 144.96727 * 20 19 13 23 23 N 1.31619 * 120.00107 * 358.04122 * 22 20 19 24 24 Si 1.86798 * 119.99944 * 178.04890 * 22 20 19 25 25 H 1.48497 * 109.47508 * 54.99455 * 24 22 20 26 26 H 1.48500 * 109.47200 * 174.99905 * 24 22 20 27 27 H 1.48508 * 109.46789 * 294.99693 * 24 22 20 28 28 H 1.08994 * 109.46894 * 305.90918 * 1 2 3 29 29 H 1.09002 * 109.46961 * 65.91395 * 1 2 3 30 30 H 1.08996 * 109.46905 * 185.91370 * 1 2 3 31 31 H 1.09006 * 109.47378 * 240.00298 * 2 1 3 32 32 H 1.09005 * 109.47506 * 120.00379 * 2 1 3 33 33 H 1.07995 * 125.57177 * 0.06268 * 4 3 2 34 34 H 1.08008 * 126.44914 * 180.22563 * 7 5 4 35 35 H 0.96997 * 119.99510 * 3.97639 * 11 9 8 36 36 H 1.08996 * 109.46685 * 65.12856 * 12 11 9 37 37 H 1.09000 * 109.46951 * 305.12981 * 12 11 9 38 38 H 1.08993 * 109.51797 * 291.95134 * 15 13 12 39 39 H 1.09004 * 109.51228 * 52.10062 * 15 13 12 40 40 H 1.09005 * 109.51563 * 302.65580 * 17 16 15 41 41 H 1.09001 * 109.55206 * 182.53368 * 17 16 15 42 42 H 1.09003 * 109.67859 * 187.97344 * 18 17 16 43 43 H 1.08999 * 109.71586 * 67.44117 * 18 17 16 44 44 H 0.96999 * 120.00359 * 179.97438 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3813 0.0000 4 6 2.5106 2.0462 -1.0748 5 6 2.8621 3.2978 -0.6919 6 17 3.5406 4.5265 -1.7135 7 6 2.5758 3.4255 0.6713 8 6 2.0546 2.2198 1.0909 9 6 1.6130 1.8925 2.4507 10 8 1.7980 2.6831 3.3572 11 7 1.0023 0.7164 2.6962 12 6 0.4835 0.4259 4.0351 13 6 -0.0417 -1.0105 4.0779 14 1 -0.7712 -1.1591 3.2816 15 6 1.1228 -1.9915 3.9009 16 8 0.6548 -3.3233 4.1271 17 6 0.1675 -3.5555 5.4508 18 6 -1.0459 -2.6546 5.7071 19 7 -0.6721 -1.2690 5.3821 20 6 -0.9037 -0.2502 6.2674 21 1 -0.2061 0.5709 6.3403 22 6 -2.0352 -0.2730 7.0712 23 7 -2.9052 -1.2539 6.9553 24 14 -2.3234 1.0886 8.3172 25 1 -2.2887 2.4043 7.6296 26 1 -3.6493 0.9001 8.9587 27 1 -1.2610 1.0437 9.3539 28 1 -0.3633 0.6027 0.8323 29 1 -0.3633 0.4194 -0.9382 30 1 -0.3633 -1.0222 0.1059 31 1 1.8934 -0.5138 -0.8900 32 1 1.8934 -0.5139 0.8900 33 1 2.6063 1.6442 -2.0725 34 1 2.7353 4.3026 1.2811 35 1 0.9064 0.0623 1.9863 36 1 -0.3271 1.1163 4.2683 37 1 1.2823 0.5427 4.7675 38 1 1.5160 -1.9109 2.8875 39 1 1.9098 -1.7555 4.6172 40 1 0.9510 -3.3252 6.1728 41 1 -0.1263 -4.6001 5.5533 42 1 -1.3367 -2.7201 6.7556 43 1 -1.8769 -2.9685 5.0755 44 1 -3.6957 -1.2700 7.5172 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001051249539.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:18:50 Heat of formation + Delta-G solvation = -0.224756 kcal Electronic energy + Delta-G solvation = -28362.088255 eV Core-core repulsion = 24342.733314 eV Total energy + Delta-G solvation = -4019.354940 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 341.129 amu Computer time = 2.34 seconds Orbital eigenvalues (eV) -41.83070 -39.25694 -38.33500 -36.64535 -35.68657 -34.73185 -33.73467 -31.62090 -30.54669 -29.73012 -29.38956 -27.05647 -25.94937 -24.04395 -23.48718 -22.77292 -21.44389 -20.81464 -20.24084 -19.53278 -18.12508 -16.83713 -16.19131 -15.91852 -15.69088 -15.49154 -15.23801 -15.11511 -14.67663 -14.53148 -14.33880 -13.92101 -13.70149 -13.46443 -13.35621 -13.08055 -13.02697 -12.89147 -12.79669 -12.37136 -12.06792 -11.78998 -11.65095 -11.40367 -11.14719 -10.98742 -10.96574 -10.81547 -10.49063 -10.26574 -10.17090 -9.99386 -9.73341 -9.10698 -8.94985 -8.81580 -8.59317 -8.40961 -6.73169 -5.92639 -3.48045 1.25542 1.87859 2.27672 2.64095 3.24531 3.33641 3.35701 3.38358 3.41839 4.13845 4.32481 4.41381 4.43913 4.47704 4.65211 4.76598 5.04828 5.16685 5.21654 5.25705 5.30097 5.41990 5.50180 5.59150 5.69950 5.72161 5.75026 5.85083 6.06379 6.12240 6.24867 6.26850 6.35251 6.47268 6.50987 6.60506 6.71153 6.76571 7.03952 7.47156 7.54701 7.67091 7.78770 8.24654 8.30818 9.04243 9.62619 10.22086 11.14423 Molecular weight = 341.13amu Principal moments of inertia in cm(-1) A = 0.014998 B = 0.003031 C = 0.002656 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1866.410415 B = 9236.156220 C =10538.031597 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 C 0.084 3.916 3 N -0.420 5.420 4 C 0.034 3.966 5 C -0.125 4.125 6 Cl -0.052 7.052 7 C -0.100 4.100 8 C -0.033 4.033 9 C 0.584 3.416 10 O -0.522 6.522 11 N -0.734 5.734 12 C 0.125 3.875 13 C 0.132 3.868 14 H 0.037 0.963 15 C 0.052 3.948 16 O -0.394 6.394 17 C 0.034 3.966 18 C 0.145 3.855 19 N -0.586 5.586 20 C -0.266 4.266 21 H 0.070 0.930 22 C 0.016 3.984 23 N -0.901 5.901 24 Si 0.905 3.095 25 H -0.278 1.278 26 H -0.289 1.289 27 H -0.282 1.282 28 H 0.076 0.924 29 H 0.073 0.927 30 H 0.089 0.911 31 H 0.108 0.892 32 H 0.095 0.905 33 H 0.177 0.823 34 H 0.157 0.843 35 H 0.394 0.606 36 H 0.087 0.913 37 H 0.075 0.925 38 H 0.070 0.930 39 H 0.047 0.953 40 H 0.041 0.959 41 H 0.081 0.919 42 H 0.097 0.903 43 H 0.029 0.971 44 H 0.257 0.743 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.352 0.630 -17.139 19.535 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.248 4.248 2 C -0.037 4.037 3 N -0.096 5.096 4 C -0.102 4.102 5 C -0.159 4.159 6 Cl -0.024 7.024 7 C -0.126 4.126 8 C -0.145 4.145 9 C 0.370 3.630 10 O -0.398 6.398 11 N -0.392 5.392 12 C 0.003 3.997 13 C 0.024 3.976 14 H 0.055 0.945 15 C -0.027 4.027 16 O -0.313 6.313 17 C -0.044 4.044 18 C 0.020 3.980 19 N -0.311 5.311 20 C -0.395 4.395 21 H 0.088 0.912 22 C -0.184 4.184 23 N -0.544 5.544 24 Si 0.734 3.266 25 H -0.204 1.204 26 H -0.215 1.215 27 H -0.208 1.208 28 H 0.095 0.905 29 H 0.092 0.908 30 H 0.108 0.892 31 H 0.126 0.874 32 H 0.113 0.887 33 H 0.194 0.806 34 H 0.175 0.825 35 H 0.234 0.766 36 H 0.105 0.895 37 H 0.093 0.907 38 H 0.089 0.911 39 H 0.066 0.934 40 H 0.060 0.940 41 H 0.099 0.901 42 H 0.115 0.885 43 H 0.047 0.953 44 H 0.067 0.933 Dipole moment (debyes) X Y Z Total from point charges 9.187 0.743 -16.512 18.910 hybrid contribution -0.288 0.623 0.330 0.761 sum 8.899 1.366 -16.182 18.518 Atomic orbital electron populations 1.22457 0.93014 1.04772 1.04544 1.22242 0.96587 0.79456 1.05371 1.44225 1.46336 1.11484 1.07594 1.21657 1.03597 0.92098 0.92819 1.19896 1.11797 0.91581 0.92591 1.98321 1.83953 1.53055 1.67040 1.21145 1.01218 0.97136 0.93106 1.20556 1.13463 0.92251 0.88269 1.16917 0.78114 0.82113 0.85880 1.90873 1.55930 1.48904 1.44089 1.46716 1.59527 1.18090 1.14827 1.21607 0.99532 0.97301 0.81297 1.21225 0.93706 0.91315 0.91315 0.94537 1.23018 0.96241 0.84032 0.99369 1.87769 1.82564 1.28764 1.32188 1.23402 0.98077 0.99908 0.83026 1.21474 0.91710 0.82262 1.02553 1.43893 1.71570 1.03820 1.11831 1.19087 1.03212 1.02074 1.15160 0.91208 1.25315 0.95105 0.97637 1.00389 1.69917 1.11921 1.31811 1.40770 0.86335 0.77205 0.82057 0.81023 1.20387 1.21480 1.20770 0.90489 0.90823 0.89209 0.87377 0.88659 0.80612 0.82536 0.76566 0.89508 0.90696 0.91148 0.93448 0.94032 0.90088 0.88471 0.95295 0.93264 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 46. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.19 -1.45 9.27 37.16 0.34 -1.10 16 2 C 0.08 0.60 5.99 -4.04 -0.02 0.58 16 3 N -0.42 -4.15 2.78 -112.82 -0.31 -4.46 16 4 C 0.03 0.31 11.34 -16.84 -0.19 0.12 16 5 C -0.13 -1.38 6.66 -39.94 -0.27 -1.64 16 6 Cl -0.05 -0.52 29.30 -51.86 -1.52 -2.04 16 7 C -0.10 -1.29 10.65 -39.09 -0.42 -1.71 16 8 C -0.03 -0.44 6.85 -81.98 -0.56 -1.00 16 9 C 0.58 9.42 7.77 -12.86 -0.10 9.32 16 10 O -0.52 -10.43 16.87 5.19 0.09 -10.35 16 11 N -0.73 -10.86 4.36 -61.62 -0.27 -11.13 16 12 C 0.13 2.31 3.91 -4.04 -0.02 2.29 16 13 C 0.13 2.54 3.16 -67.43 -0.21 2.32 16 14 H 0.04 0.72 8.14 -51.93 -0.42 0.30 16 15 C 0.05 0.88 6.08 37.31 0.23 1.11 16 16 O -0.39 -7.32 10.74 -35.23 -0.38 -7.69 16 17 C 0.03 0.63 6.98 37.31 0.26 0.90 16 18 C 0.15 3.30 5.35 -3.53 -0.02 3.28 16 19 N -0.59 -13.78 3.03 -164.31 -0.50 -14.28 16 20 C -0.27 -6.88 8.43 -15.06 -0.13 -7.01 16 21 H 0.07 1.79 6.51 -52.49 -0.34 1.45 16 22 C 0.02 0.41 5.22 -17.43 -0.09 0.32 16 23 N -0.90 -24.85 10.96 55.49 0.61 -24.25 16 24 Si 0.90 21.21 29.55 -169.99 -5.02 16.18 16 25 H -0.28 -6.55 7.11 56.52 0.40 -6.15 16 26 H -0.29 -6.81 7.11 56.52 0.40 -6.41 16 27 H -0.28 -6.55 7.11 56.52 0.40 -6.15 16 28 H 0.08 0.80 6.48 -51.93 -0.34 0.46 16 29 H 0.07 0.50 8.14 -51.93 -0.42 0.08 16 30 H 0.09 0.58 8.14 -51.93 -0.42 0.16 16 31 H 0.11 0.44 8.09 -51.93 -0.42 0.02 16 32 H 0.10 0.71 6.39 -51.93 -0.33 0.38 16 33 H 0.18 0.99 8.06 -52.49 -0.42 0.57 16 34 H 0.16 2.03 8.06 -52.48 -0.42 1.61 16 35 H 0.39 4.72 2.26 -40.82 -0.09 4.63 16 36 H 0.09 1.84 7.30 -51.93 -0.38 1.46 16 37 H 0.07 1.49 7.80 -51.93 -0.41 1.08 16 38 H 0.07 0.94 7.61 -51.93 -0.40 0.55 16 39 H 0.05 0.83 8.13 -51.93 -0.42 0.41 16 40 H 0.04 0.78 8.14 -51.93 -0.42 0.36 16 41 H 0.08 1.33 8.14 -51.93 -0.42 0.91 16 42 H 0.10 2.43 6.35 -51.93 -0.33 2.10 16 43 H 0.03 0.70 8.14 -51.93 -0.42 0.28 16 44 H 0.26 6.91 8.31 -40.82 -0.34 6.58 16 LS Contribution 366.77 15.07 5.53 5.53 Total: -1.00 -31.12 366.77 -8.94 -40.06 By element: Atomic # 1 Polarization: 10.63 SS G_CDS: -5.97 Total: 4.65 kcal Atomic # 6 Polarization: 8.96 SS G_CDS: -1.19 Total: 7.77 kcal Atomic # 7 Polarization: -53.65 SS G_CDS: -0.47 Total: -54.12 kcal Atomic # 8 Polarization: -17.75 SS G_CDS: -0.29 Total: -18.04 kcal Atomic # 14 Polarization: 21.21 SS G_CDS: -5.02 Total: 16.18 kcal Atomic # 17 Polarization: -0.52 SS G_CDS: -1.52 Total: -2.04 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -31.12 -8.94 -40.06 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001051249539.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.840 kcal (2) G-P(sol) polarization free energy of solvation -31.123 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.718 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.942 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.065 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.225 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.34 seconds