Wall clock time and date at job start Sat Apr 11 2020 06:18:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.35635 * 125.67575 * 2 1 4 4 C 1.35515 * 108.85049 * 179.97438 * 3 2 1 5 5 Cl 1.73605 * 126.07201 * 180.02562 * 4 3 2 6 6 C 1.39886 * 107.84992 * 359.73649 * 4 3 2 7 7 C 1.37633 * 125.67711 * 179.97438 * 2 1 3 8 8 C 1.46674 * 126.22392 * 0.02793 * 7 2 1 9 9 O 1.21688 * 119.99836 * 173.36244 * 8 7 2 10 10 N 1.34771 * 119.99583 * 353.36111 * 8 7 2 11 11 C 1.46504 * 119.99953 * 183.94448 * 10 8 7 12 12 C 1.53001 * 109.46236 * 60.59225 * 11 10 8 13 13 O 1.42895 * 109.46862 * 54.76361 * 12 11 10 14 14 C 1.53041 * 109.45115 * 180.56320 * 11 10 8 15 15 C 1.53188 * 109.31290 * 58.64646 * 14 11 10 16 16 N 1.46919 * 108.77841 * 54.63358 * 15 14 11 17 17 C 1.36943 * 120.63198 * 126.37197 * 16 15 14 18 18 H 1.08002 * 119.99991 * 197.90310 * 17 16 15 19 19 C 1.38812 * 119.99664 * 17.89786 * 17 16 15 20 20 N 1.31611 * 120.00120 * 31.93345 * 19 17 16 21 21 Si 1.86805 * 119.99789 * 211.93102 * 19 17 16 22 22 H 1.48502 * 109.46926 * 95.00108 * 21 19 17 23 23 H 1.48500 * 109.46844 * 215.00140 * 21 19 17 24 24 H 1.48501 * 109.47108 * 335.00172 * 21 19 17 25 25 C 1.46930 * 118.74041 * 306.39190 * 16 15 14 26 26 C 1.53047 * 109.45714 * 300.62200 * 11 10 8 27 27 H 1.09000 * 109.47348 * 257.14670 * 1 2 3 28 28 H 1.08998 * 109.47144 * 17.14222 * 1 2 3 29 29 H 1.08990 * 109.47046 * 137.14778 * 1 2 3 30 30 H 1.07999 * 125.57382 * 359.97438 * 3 2 1 31 31 H 1.08010 * 126.45088 * 180.27115 * 6 4 3 32 32 H 0.97003 * 120.00463 * 3.93778 * 10 8 7 33 33 H 1.09001 * 109.47096 * 294.77178 * 12 11 10 34 34 H 1.08998 * 109.47022 * 174.76783 * 12 11 10 35 35 H 0.96706 * 113.99900 * 179.97438 * 13 12 11 36 36 H 1.09004 * 109.49572 * 178.59437 * 14 11 10 37 37 H 1.09003 * 109.49391 * 298.69249 * 14 11 10 38 38 H 1.09010 * 109.58733 * 294.84757 * 15 14 11 39 39 H 1.08998 * 109.58925 * 174.42373 * 15 14 11 40 40 H 0.97003 * 120.00434 * 179.97438 * 20 19 17 41 41 H 1.08995 * 109.58826 * 293.81867 * 25 16 15 42 42 H 1.09000 * 109.58482 * 173.39374 * 25 16 15 43 43 H 1.09003 * 109.49794 * 61.30806 * 26 11 10 44 44 H 1.08997 * 109.49718 * 181.40382 * 26 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2560 1.1018 0.0000 4 6 3.5532 0.7096 0.0006 5 17 4.9378 1.7568 0.0014 6 6 3.5782 -0.6891 0.0071 7 6 2.2677 -1.1180 0.0005 8 6 1.8121 -2.5122 0.0005 9 8 2.6181 -3.4157 -0.1208 10 7 0.5007 -2.7924 0.1350 11 6 0.0544 -4.1851 0.2219 12 6 0.6902 -4.8488 1.4452 13 8 0.3963 -4.0778 2.6119 14 6 -1.4697 -4.2246 0.3549 15 6 -2.1019 -3.5288 -0.8546 16 7 -1.5869 -4.1521 -2.0813 17 6 -2.4459 -4.6348 -3.0324 18 1 -2.0916 -5.3345 -3.7749 19 6 -3.7720 -4.2247 -3.0420 20 7 -4.0891 -3.0129 -2.6382 21 14 -5.1066 -5.3930 -3.6283 22 1 -5.7008 -6.0917 -2.4603 23 1 -6.1624 -4.6238 -4.3347 24 1 -4.5176 -6.3920 -4.5557 25 6 -0.1327 -4.2481 -2.2682 26 6 0.4774 -4.9359 -1.0429 27 1 -0.3634 -0.2286 1.0019 28 1 -0.3633 0.9820 -0.3029 29 1 -0.3633 -0.7533 -0.6989 30 1 1.9089 2.1245 -0.0004 31 1 4.4583 -1.3151 0.0133 32 1 -0.1478 -2.0720 0.1743 33 1 1.7702 -4.9036 1.3086 34 1 0.2872 -5.8546 1.5633 35 1 0.7687 -4.4407 3.4272 36 1 -1.8047 -5.2611 0.3945 37 1 -1.7686 -3.7099 1.2681 38 1 -1.8409 -2.4705 -0.8451 39 1 -3.1855 -3.6403 -0.8152 40 1 -5.0158 -2.7262 -2.6452 41 1 0.2889 -3.2486 -2.3740 42 1 0.0829 -4.8343 -3.1615 43 1 1.5643 -4.9275 -1.1246 44 1 0.1241 -5.9657 -0.9900 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001725019931.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:18:32 Heat of formation + Delta-G solvation = -3.002104 kcal Electronic energy + Delta-G solvation = -29191.849877 eV Core-core repulsion = 25172.374502 eV Total energy + Delta-G solvation = -4019.475375 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 341.129 amu Computer time = 3.00 seconds Orbital eigenvalues (eV) -41.62093 -39.91855 -37.42686 -36.48495 -36.19642 -34.33457 -33.06429 -31.93964 -30.67008 -30.08537 -28.92647 -26.87405 -26.68003 -23.97462 -23.15694 -22.43205 -21.00804 -20.67465 -19.96650 -18.84770 -17.87315 -17.17876 -16.82824 -15.99635 -15.79846 -15.20006 -14.87554 -14.74518 -14.54210 -14.07674 -14.00494 -13.95845 -13.52232 -13.35807 -13.23581 -12.98265 -12.97980 -12.68591 -12.52012 -12.28693 -11.86648 -11.58909 -11.49936 -11.40969 -11.11402 -10.89135 -10.77791 -10.51573 -10.40123 -10.10143 -9.99881 -9.80839 -9.71298 -9.24784 -8.84791 -8.69321 -8.46426 -8.27955 -6.93176 -5.94391 -3.16501 1.41077 2.01688 2.40238 2.81687 3.34300 3.38280 3.44021 3.45196 3.49048 4.37102 4.46272 4.55671 4.61477 4.82433 4.96369 5.15112 5.16863 5.23724 5.28119 5.36009 5.46144 5.54046 5.63931 5.70595 5.83048 5.88385 5.99338 6.14994 6.20547 6.37379 6.42024 6.47808 6.54515 6.68611 6.70843 6.81349 6.87410 6.92707 7.11827 7.36595 7.71800 7.73885 7.78062 8.26312 8.39957 9.07940 9.76164 10.29278 11.15319 Molecular weight = 341.13amu Principal moments of inertia in cm(-1) A = 0.015189 B = 0.003374 C = 0.003057 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1843.020870 B = 8296.476023 C = 9158.084691 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.051 3.949 2 N -0.419 5.419 3 C 0.032 3.968 4 C -0.127 4.127 5 Cl -0.054 7.054 6 C -0.104 4.104 7 C -0.031 4.031 8 C 0.593 3.407 9 O -0.533 6.533 10 N -0.703 5.703 11 C 0.192 3.808 12 C 0.064 3.936 13 O -0.568 6.568 14 C -0.143 4.143 15 C 0.167 3.833 16 N -0.591 5.591 17 C -0.255 4.255 18 H 0.072 0.928 19 C 0.003 3.997 20 N -0.891 5.891 21 Si 0.887 3.113 22 H -0.288 1.288 23 H -0.294 1.294 24 H -0.279 1.279 25 C 0.154 3.846 26 C -0.146 4.146 27 H 0.088 0.912 28 H 0.102 0.898 29 H 0.099 0.901 30 H 0.176 0.824 31 H 0.155 0.845 32 H 0.397 0.603 33 H 0.062 0.938 34 H 0.049 0.951 35 H 0.372 0.628 36 H 0.073 0.927 37 H 0.063 0.937 38 H 0.009 0.991 39 H 0.093 0.907 40 H 0.253 0.747 41 H 0.015 0.985 42 H 0.056 0.944 43 H 0.081 0.919 44 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.632 6.413 10.085 15.996 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 N -0.094 5.094 3 C -0.104 4.104 4 C -0.160 4.160 5 Cl -0.026 7.026 6 C -0.130 4.130 7 C -0.144 4.144 8 C 0.379 3.621 9 O -0.411 6.411 10 N -0.357 5.357 11 C 0.106 3.894 12 C -0.015 4.015 13 O -0.372 6.372 14 C -0.182 4.182 15 C 0.041 3.959 16 N -0.314 5.314 17 C -0.383 4.383 18 H 0.090 0.910 19 C -0.195 4.195 20 N -0.535 5.535 21 Si 0.717 3.283 22 H -0.215 1.215 23 H -0.220 1.220 24 H -0.204 1.204 25 C 0.027 3.973 26 C -0.186 4.186 27 H 0.107 0.893 28 H 0.120 0.880 29 H 0.117 0.883 30 H 0.194 0.806 31 H 0.173 0.827 32 H 0.237 0.763 33 H 0.080 0.920 34 H 0.067 0.933 35 H 0.217 0.783 36 H 0.092 0.908 37 H 0.082 0.918 38 H 0.027 0.973 39 H 0.111 0.889 40 H 0.063 0.937 41 H 0.032 0.968 42 H 0.074 0.926 43 H 0.099 0.901 44 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges 10.406 6.236 9.531 15.428 hybrid contribution -0.735 -0.359 0.160 0.833 sum 9.671 5.877 9.691 14.899 Atomic orbital electron populations 1.22521 0.75650 1.06247 1.04582 1.44009 1.06751 1.05333 1.53285 1.21667 0.88927 0.92164 1.07663 1.19865 0.87833 0.91298 1.16976 1.98312 1.40945 1.65594 1.97758 1.21070 0.95453 0.92467 1.04025 1.20600 0.90245 0.87011 1.16549 1.16856 0.82699 0.85958 0.76543 1.90743 1.54112 1.45509 1.50755 1.46340 1.06914 1.09352 1.73132 1.20363 0.95267 0.80500 0.93258 1.22718 1.00026 0.93519 0.85200 1.86464 1.79260 1.54115 1.17379 1.22444 0.92050 1.03032 1.00696 1.20806 1.00029 0.92277 0.82775 1.44207 0.99662 1.69679 1.17838 1.19224 0.90253 1.19149 1.09717 0.91047 1.24688 0.98417 0.95582 1.00843 1.70210 1.17580 1.14453 1.51298 0.86488 0.82206 0.81499 0.78147 1.21523 1.22044 1.20380 1.20773 0.85083 0.96779 0.94645 1.22426 1.01777 0.99408 0.94990 0.89333 0.87950 0.88283 0.80634 0.82727 0.76276 0.92021 0.93264 0.78273 0.90821 0.91849 0.97348 0.88864 0.93681 0.96750 0.92566 0.90090 0.91362 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 46. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.51 9.41 59.85 0.56 1.08 16 2 N -0.42 -5.08 3.16 -120.19 -0.38 -5.46 16 3 C 0.03 0.35 11.33 -16.84 -0.19 0.16 16 4 C -0.13 -1.56 6.66 -39.94 -0.27 -1.83 16 5 Cl -0.05 -0.60 29.30 -51.86 -1.52 -2.12 16 6 C -0.10 -1.45 10.65 -39.09 -0.42 -1.87 16 7 C -0.03 -0.46 6.88 -81.98 -0.56 -1.02 16 8 C 0.59 9.82 7.19 -12.86 -0.09 9.72 16 9 O -0.53 -9.87 13.18 5.20 0.07 -9.81 16 10 N -0.70 -11.17 3.73 -48.86 -0.18 -11.35 16 11 C 0.19 3.18 0.44 -131.77 -0.06 3.12 16 12 C 0.06 0.94 5.65 37.16 0.21 1.15 16 13 O -0.57 -7.69 12.94 -35.23 -0.46 -8.14 16 14 C -0.14 -2.53 4.87 -26.61 -0.13 -2.66 16 15 C 0.17 3.60 5.26 -3.72 -0.02 3.58 16 16 N -0.59 -13.91 3.02 -172.32 -0.52 -14.43 16 17 C -0.25 -6.72 9.58 -15.06 -0.14 -6.86 16 18 H 0.07 1.89 7.93 -52.49 -0.42 1.47 16 19 C 0.00 0.09 4.60 -17.43 -0.08 0.01 16 20 N -0.89 -24.37 11.50 55.49 0.64 -23.73 16 21 Si 0.89 20.88 29.66 -169.99 -5.04 15.84 16 22 H -0.29 -6.79 7.11 56.52 0.40 -6.39 16 23 H -0.29 -7.02 7.11 56.52 0.40 -6.62 16 24 H -0.28 -6.50 7.11 56.52 0.40 -6.10 16 25 C 0.15 3.19 6.26 -3.71 -0.02 3.17 16 26 C -0.15 -2.62 4.65 -26.61 -0.12 -2.75 16 27 H 0.09 0.79 7.92 -51.93 -0.41 0.38 16 28 H 0.10 0.75 8.09 -51.93 -0.42 0.33 16 29 H 0.10 1.23 6.00 -51.93 -0.31 0.91 16 30 H 0.18 1.34 8.06 -52.49 -0.42 0.91 16 31 H 0.16 2.09 8.06 -52.48 -0.42 1.67 16 32 H 0.40 5.94 2.99 -40.82 -0.12 5.82 16 33 H 0.06 0.96 6.49 -51.93 -0.34 0.62 16 34 H 0.05 0.66 8.14 -51.93 -0.42 0.24 16 35 H 0.37 3.36 9.12 45.56 0.42 3.78 16 36 H 0.07 1.34 8.14 -51.93 -0.42 0.92 16 37 H 0.06 1.05 7.80 -51.93 -0.40 0.65 16 38 H 0.01 0.18 6.53 -51.92 -0.34 -0.16 16 39 H 0.09 2.29 5.78 -51.93 -0.30 1.99 16 40 H 0.25 6.72 8.31 -40.82 -0.34 6.38 16 41 H 0.01 0.31 7.74 -51.93 -0.40 -0.09 16 42 H 0.06 1.17 7.88 -51.93 -0.41 0.76 16 43 H 0.08 1.47 6.03 -51.93 -0.31 1.16 16 44 H 0.07 1.21 8.14 -51.93 -0.42 0.78 16 LS Contribution 360.41 15.07 5.43 5.43 Total: -1.00 -31.04 360.41 -8.32 -39.36 By element: Atomic # 1 Polarization: 14.44 SS G_CDS: -5.02 Total: 9.42 kcal Atomic # 6 Polarization: 6.33 SS G_CDS: -1.34 Total: 5.00 kcal Atomic # 7 Polarization: -54.53 SS G_CDS: -0.45 Total: -54.98 kcal Atomic # 8 Polarization: -17.56 SS G_CDS: -0.39 Total: -17.95 kcal Atomic # 14 Polarization: 20.88 SS G_CDS: -5.04 Total: 15.84 kcal Atomic # 17 Polarization: -0.60 SS G_CDS: -1.52 Total: -2.12 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -31.04 -8.32 -39.36 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001725019931.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.356 kcal (2) G-P(sol) polarization free energy of solvation -31.039 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.317 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.319 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.358 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.002 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.00 seconds