Wall clock time and date at job start Sat Apr 11 2020 06:18:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 N 1.30851 * 125.77982 * 2 1 4 4 N 1.40070 * 108.41294 * 179.97438 * 3 2 1 5 5 C 1.46505 * 126.09361 * 179.97438 * 4 3 2 6 6 C 1.35850 * 107.81697 * 359.97438 * 4 3 2 7 7 N 1.39588 * 126.26485 * 179.97438 * 6 4 3 8 8 C 1.34784 * 119.99858 * 311.90306 * 7 6 4 9 9 O 1.21582 * 119.99670 * 5.98442 * 8 7 6 10 10 N 1.34775 * 119.99976 * 185.97896 * 8 7 6 11 11 C 1.47082 * 120.88024 * 355.45561 * 10 8 7 12 12 C 1.53698 * 108.27480 * 128.75548 * 11 10 8 13 13 N 1.46898 * 109.25918 * 54.08253 * 12 11 10 14 14 C 1.46897 * 111.00422 * 172.60729 * 13 12 11 15 15 C 1.50697 * 109.46791 * 294.30376 * 14 13 12 16 16 H 1.07999 * 120.00379 * 359.97438 * 15 14 13 17 17 C 1.37880 * 119.99855 * 180.02562 * 15 14 13 18 18 N 1.31515 * 119.99879 * 359.97438 * 17 15 14 19 19 Si 1.86805 * 120.00096 * 179.97438 * 17 15 14 20 20 H 1.48501 * 109.47122 * 89.99644 * 19 17 15 21 21 H 1.48503 * 109.46617 * 209.99365 * 19 17 15 22 22 H 1.48499 * 109.46963 * 329.99250 * 19 17 15 23 23 C 1.46903 * 111.26770 * 296.75889 * 13 12 11 24 24 C 1.47075 * 120.88174 * 175.73306 * 10 8 7 25 25 C 1.36147 * 107.47421 * 0.23058 * 6 4 3 26 26 Cl 1.73596 * 126.07415 * 179.77002 * 25 6 4 27 27 H 1.09000 * 109.46359 * 90.03267 * 1 2 3 28 28 H 1.08998 * 109.47222 * 210.03126 * 1 2 3 29 29 H 1.09000 * 109.46866 * 330.03681 * 1 2 3 30 30 H 1.08992 * 109.47351 * 267.25418 * 5 4 3 31 31 H 1.09001 * 109.47039 * 27.25488 * 5 4 3 32 32 H 1.09001 * 109.46763 * 147.24847 * 5 4 3 33 33 H 0.97002 * 120.00326 * 131.91014 * 7 6 4 34 34 H 1.09003 * 109.62672 * 248.52297 * 11 10 8 35 35 H 1.09004 * 109.62988 * 9.10098 * 11 10 8 36 36 H 1.09000 * 109.64863 * 294.07781 * 12 11 10 37 37 H 1.08996 * 109.43947 * 173.96011 * 12 11 10 38 38 H 1.08998 * 109.46759 * 54.29763 * 14 13 12 39 39 H 1.08998 * 109.46940 * 174.29802 * 14 13 12 40 40 H 0.97001 * 120.00251 * 180.02562 * 18 17 15 41 41 H 1.09004 * 109.48965 * 303.14136 * 23 13 12 42 42 H 1.08999 * 109.49379 * 183.06130 * 23 13 12 43 43 H 1.08998 * 109.62781 * 350.90039 * 24 10 8 44 44 H 1.09006 * 109.62790 * 111.47296 * 24 10 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 7 2.2721 1.0616 0.0000 4 7 3.6090 0.6435 0.0006 5 6 4.7860 1.5157 0.0003 6 6 3.6196 -0.7150 0.0015 7 7 4.7516 -1.5318 0.0019 8 6 5.7540 -1.2946 -0.8673 9 8 5.7231 -0.3073 -1.5762 10 7 6.7908 -2.1517 -0.9505 11 6 6.8982 -3.2976 -0.0347 12 6 7.1235 -4.5656 -0.8737 13 7 8.2818 -4.3644 -1.7545 14 6 8.6398 -5.6098 -2.4463 15 6 9.1176 -6.6241 -1.4394 16 1 9.1523 -6.3690 -0.3905 17 6 9.5116 -7.8776 -1.8573 18 7 9.4699 -8.1882 -3.1346 19 14 10.1046 -9.1348 -0.6093 20 1 8.9500 -9.9320 -0.1229 21 1 11.0952 -10.0376 -1.2487 22 1 10.7399 -8.4341 0.5355 23 6 8.0388 -3.2797 -2.7150 24 6 7.8478 -1.9626 -1.9555 25 6 2.3242 -1.1340 -0.0037 26 17 1.7835 -2.7836 -0.0106 27 1 -0.3632 -0.0006 -1.0277 28 1 -0.3633 -0.8897 0.5143 29 1 -0.3633 0.8903 0.5133 30 1 5.1075 1.6918 -1.0262 31 1 4.5339 2.4664 0.4702 32 1 5.5924 1.0379 0.5568 33 1 4.8167 -2.2702 0.6275 34 1 7.7398 -3.1481 0.6416 35 1 5.9766 -3.3955 0.5391 36 1 6.2385 -4.7679 -1.4771 37 1 7.3128 -5.4101 -0.2111 38 1 7.7659 -5.9997 -2.9681 39 1 9.4337 -5.4103 -3.1660 40 1 9.7467 -9.0701 -3.4286 41 1 7.1410 -3.4999 -3.2927 42 1 8.8920 -3.1914 -3.3875 43 1 7.5544 -1.1774 -2.6522 44 1 8.7789 -1.6872 -1.4602 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000888627911.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:18:17 Heat of formation + Delta-G solvation = 67.601466 kcal Electronic energy + Delta-G solvation = -27815.752947 eV Core-core repulsion = 23831.631924 eV Total energy + Delta-G solvation = -3984.121023 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 341.136 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -41.87137 -40.31285 -37.87366 -36.58861 -35.29270 -34.67202 -33.68319 -32.46931 -30.96667 -29.98614 -29.19043 -28.12232 -25.66965 -25.58124 -23.53446 -22.82215 -21.54309 -21.08445 -20.19799 -19.34657 -18.42591 -17.67774 -16.46018 -16.28288 -15.98025 -15.66492 -15.30534 -14.79685 -14.65040 -14.52025 -14.23419 -13.90458 -13.74427 -13.66002 -13.58260 -13.16441 -12.88935 -12.63968 -12.48894 -12.40518 -12.02280 -11.73089 -11.60535 -11.39285 -11.20683 -11.11632 -10.96674 -10.88098 -10.72869 -10.64563 -10.48474 -10.20277 -9.95709 -9.36475 -9.18344 -8.68591 -8.53009 -8.38157 -7.43562 -6.12042 -4.14616 1.36137 1.67911 2.15434 2.23660 2.60066 2.96370 3.25059 3.32211 3.35140 3.51855 4.23433 4.32903 4.60445 4.67408 4.92593 5.04360 5.05473 5.11591 5.20915 5.24229 5.27077 5.37189 5.46753 5.50460 5.50741 5.56973 5.62661 5.66014 5.73532 5.88247 6.16464 6.18041 6.25337 6.32398 6.40492 6.62320 6.73055 7.13049 7.20309 7.30698 7.56838 7.66598 7.92395 8.03410 8.20729 8.38924 8.92273 9.50272 10.98703 Molecular weight = 341.14amu Principal moments of inertia in cm(-1) A = 0.017426 B = 0.002664 C = 0.002429 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1606.435102 B =10507.219597 C =11524.280696 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 C 0.100 3.900 3 N -0.276 5.276 4 N -0.353 5.353 5 C 0.114 3.886 6 C 0.354 3.646 7 N -0.668 5.668 8 C 0.709 3.291 9 O -0.580 6.580 10 N -0.613 5.613 11 C 0.111 3.889 12 C 0.051 3.949 13 N -0.535 5.535 14 C 0.194 3.806 15 C -0.511 4.511 16 H 0.064 0.936 17 C 0.056 3.944 18 N -0.897 5.897 19 Si 0.898 3.102 20 H -0.281 1.281 21 H -0.286 1.286 22 H -0.273 1.273 23 C 0.039 3.961 24 C 0.136 3.864 25 C -0.204 4.204 26 Cl -0.035 7.035 27 H 0.082 0.918 28 H 0.082 0.918 29 H 0.077 0.923 30 H 0.095 0.905 31 H 0.085 0.915 32 H 0.078 0.922 33 H 0.420 0.580 34 H 0.083 0.917 35 H 0.069 0.931 36 H 0.028 0.972 37 H 0.099 0.901 38 H -0.008 1.008 39 H 0.033 0.967 40 H 0.262 0.738 41 H 0.028 0.972 42 H 0.084 0.916 43 H 0.090 0.910 44 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.358 16.066 8.429 22.530 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C -0.066 4.066 3 N -0.101 5.101 4 N -0.137 5.137 5 C -0.026 4.026 6 C 0.130 3.870 7 N -0.326 5.326 8 C 0.411 3.589 9 O -0.457 6.457 10 N -0.349 5.349 11 C -0.012 4.012 12 C -0.079 4.079 13 N -0.260 5.260 14 C 0.069 3.931 15 C -0.550 4.550 16 H 0.082 0.918 17 C -0.145 4.145 18 N -0.536 5.536 19 Si 0.726 3.274 20 H -0.207 1.207 21 H -0.212 1.212 22 H -0.197 1.197 23 C -0.090 4.090 24 C 0.014 3.986 25 C -0.246 4.246 26 Cl -0.007 7.007 27 H 0.100 0.900 28 H 0.100 0.900 29 H 0.096 0.904 30 H 0.113 0.887 31 H 0.103 0.897 32 H 0.097 0.903 33 H 0.262 0.738 34 H 0.101 0.899 35 H 0.087 0.913 36 H 0.046 0.954 37 H 0.118 0.882 38 H 0.010 0.990 39 H 0.051 0.949 40 H 0.072 0.928 41 H 0.046 0.954 42 H 0.103 0.897 43 H 0.108 0.892 44 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -12.710 17.948 8.037 23.415 hybrid contribution -0.110 -2.592 0.343 2.617 sum -12.820 15.356 8.380 21.688 Atomic orbital electron populations 1.20245 0.85742 1.03737 1.03568 1.21984 0.97298 0.88382 0.98937 1.77501 0.85158 1.21035 1.26408 1.48552 1.06191 1.02899 1.56081 1.21985 0.82639 0.93098 1.04914 1.16996 0.86432 0.82678 1.00886 1.42193 1.16826 1.33507 1.40067 1.15794 0.79480 0.83263 0.80368 1.90912 1.79305 1.28486 1.47005 1.47433 1.23293 1.27306 1.36870 1.22096 1.01151 0.85810 0.92168 1.22396 0.92567 0.96041 0.96867 1.62092 1.34118 1.08771 1.20994 1.19730 0.95264 0.84124 0.93960 1.21113 1.43433 0.96440 0.94015 0.91805 1.24998 0.95777 0.98446 0.95316 1.69952 1.48052 1.21407 1.14160 0.86499 0.78575 0.81096 0.81256 1.20702 1.21221 1.19737 1.22446 1.00374 0.91646 0.94584 1.21751 0.88782 0.98128 0.89978 1.19994 0.90817 0.87787 1.25982 1.98326 1.89525 1.15003 1.97877 0.89978 0.89962 0.90383 0.88669 0.89674 0.90342 0.73846 0.89925 0.91266 0.95404 0.88248 0.99041 0.94935 0.92799 0.95383 0.89746 0.89154 0.90645 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.59 10.30 36.01 0.37 -0.22 16 2 C 0.10 1.17 7.20 -82.43 -0.59 0.58 16 3 N -0.28 -3.62 12.56 33.66 0.42 -3.20 16 4 N -0.35 -4.56 3.96 -66.98 -0.27 -4.83 16 5 C 0.11 1.21 9.52 59.85 0.57 1.78 16 6 C 0.35 4.59 6.99 -152.50 -1.07 3.52 16 7 N -0.67 -7.97 5.31 -15.67 -0.08 -8.06 16 8 C 0.71 9.85 7.68 -86.91 -0.67 9.18 16 9 O -0.58 -9.31 12.42 5.29 0.07 -9.24 16 10 N -0.61 -8.32 3.00 -177.91 -0.53 -8.85 16 11 C 0.11 1.40 6.62 -3.36 -0.02 1.37 16 12 C 0.05 0.85 5.47 -3.46 -0.02 0.83 16 13 N -0.53 -10.41 4.62 -235.47 -1.09 -11.50 16 14 C 0.19 4.75 4.72 -4.98 -0.02 4.72 16 15 C -0.51 -13.47 8.41 -34.44 -0.29 -13.76 16 16 H 0.06 1.64 7.13 -52.49 -0.37 1.26 16 17 C 0.06 1.53 5.46 -17.82 -0.10 1.44 16 18 N -0.90 -25.79 13.29 55.43 0.74 -25.05 16 19 Si 0.90 20.69 29.54 -169.99 -5.02 15.67 16 20 H -0.28 -6.39 7.11 56.52 0.40 -5.98 16 21 H -0.29 -6.62 7.11 56.52 0.40 -6.21 16 22 H -0.27 -6.15 7.11 56.52 0.40 -5.75 16 23 C 0.04 0.65 5.62 -3.70 -0.02 0.63 16 24 C 0.14 1.91 6.58 -3.61 -0.02 1.89 16 25 C -0.20 -2.53 6.66 -39.76 -0.26 -2.79 16 26 Cl -0.04 -0.40 28.99 -51.86 -1.50 -1.90 16 27 H 0.08 0.58 8.14 -51.93 -0.42 0.16 16 28 H 0.08 0.56 8.00 -51.93 -0.42 0.14 16 29 H 0.08 0.52 8.14 -51.93 -0.42 0.10 16 30 H 0.09 1.14 6.81 -51.93 -0.35 0.78 16 31 H 0.08 0.72 8.14 -51.93 -0.42 0.29 16 32 H 0.08 0.78 7.68 -51.93 -0.40 0.38 16 33 H 0.42 4.13 6.33 -40.82 -0.26 3.87 16 34 H 0.08 1.00 8.14 -51.93 -0.42 0.58 16 35 H 0.07 0.68 5.64 -51.93 -0.29 0.38 16 36 H 0.03 0.50 8.14 -51.93 -0.42 0.07 16 37 H 0.10 1.78 6.67 -51.93 -0.35 1.44 16 38 H -0.01 -0.22 8.12 -51.93 -0.42 -0.64 16 39 H 0.03 0.86 7.97 -51.93 -0.41 0.44 16 40 H 0.26 7.16 8.31 -40.82 -0.34 6.82 16 41 H 0.03 0.50 8.14 -51.93 -0.42 0.08 16 42 H 0.08 1.37 7.99 -51.93 -0.41 0.95 16 43 H 0.09 1.26 7.09 -51.93 -0.37 0.89 16 44 H 0.08 1.00 8.14 -51.93 -0.42 0.58 16 LS Contribution 370.98 15.07 5.59 5.59 Total: -1.00 -31.58 370.98 -9.98 -41.56 By element: Atomic # 1 Polarization: 6.79 SS G_CDS: -6.15 Total: 0.63 kcal Atomic # 6 Polarization: 11.32 SS G_CDS: -2.15 Total: 9.18 kcal Atomic # 7 Polarization: -60.67 SS G_CDS: -0.81 Total: -61.48 kcal Atomic # 8 Polarization: -9.31 SS G_CDS: 0.07 Total: -9.24 kcal Atomic # 14 Polarization: 20.69 SS G_CDS: -5.02 Total: 15.67 kcal Atomic # 17 Polarization: -0.40 SS G_CDS: -1.50 Total: -1.90 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -31.58 -9.98 -41.56 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000888627911.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 109.157 kcal (2) G-P(sol) polarization free energy of solvation -31.577 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 77.580 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.979 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.556 kcal (6) G-S(sol) free energy of system = (1) + (5) 67.601 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds