Wall clock time and date at job start Sat Apr 11 2020 06:23:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34232 * 116.99957 * 2 1 4 4 O 1.20827 * 120.00159 * 0.02562 * 3 2 1 5 5 C 1.50699 * 120.00096 * 180.02562 * 3 2 1 6 6 N 1.46494 * 109.47266 * 185.06799 * 5 3 2 7 7 C 1.36942 * 120.00186 * 263.87016 * 6 5 3 8 8 H 1.08005 * 119.99936 * 145.77698 * 7 6 5 9 9 C 1.38809 * 119.99589 * 325.77604 * 7 6 5 10 10 N 1.31617 * 119.99870 * 157.77379 * 9 7 6 11 11 Si 1.86805 * 119.99928 * 337.76749 * 9 7 6 12 12 H 1.48496 * 109.46932 * 95.36789 * 11 9 7 13 13 H 1.48499 * 109.46849 * 215.36521 * 11 9 7 14 14 H 1.48491 * 109.47409 * 335.36475 * 11 9 7 15 15 C 1.46503 * 120.00114 * 83.86364 * 6 5 3 16 16 C 1.50700 * 109.46875 * 95.19334 * 15 6 5 17 17 O 1.21281 * 120.00067 * 354.86193 * 16 15 6 18 18 N 1.34784 * 120.00288 * 174.86581 * 16 15 6 19 19 C 1.46501 * 120.00281 * 179.97438 * 18 16 15 20 20 C 1.52999 * 109.47006 * 180.02562 * 19 18 16 21 21 C 1.52998 * 109.46865 * 180.02562 * 20 19 18 22 22 N 1.46503 * 109.47061 * 180.02562 * 21 20 19 23 23 C 1.46765 * 124.34548 * 89.99801 * 22 21 20 24 24 C 1.54484 * 105.54501 * 197.07862 * 23 22 21 25 25 C 1.54634 * 101.76583 * 334.54138 * 24 23 22 26 26 C 1.34613 * 124.46743 * 270.02442 * 22 21 20 27 27 O 1.21285 * 124.91058 * 359.55434 * 26 22 21 28 28 H 1.09003 * 109.47123 * 180.02562 * 1 2 3 29 29 H 1.09007 * 109.46976 * 299.99489 * 1 2 3 30 30 H 1.08999 * 109.47594 * 59.99512 * 1 2 3 31 31 H 1.08995 * 109.47477 * 65.06292 * 5 3 2 32 32 H 1.09000 * 109.46819 * 305.06283 * 5 3 2 33 33 H 0.97000 * 120.00194 * 179.97438 * 10 9 7 34 34 H 1.08995 * 109.47166 * 335.19393 * 15 6 5 35 35 H 1.09002 * 109.47752 * 215.19258 * 15 6 5 36 36 H 0.96998 * 119.99545 * 359.97438 * 18 16 15 37 37 H 1.09002 * 109.46239 * 60.00087 * 19 18 16 38 38 H 1.08999 * 109.46752 * 300.00364 * 19 18 16 39 39 H 1.09002 * 109.47101 * 60.00269 * 20 19 18 40 40 H 1.09004 * 109.47073 * 300.00240 * 20 19 18 41 41 H 1.09002 * 109.47325 * 60.00059 * 21 20 19 42 42 H 1.09004 * 109.47188 * 299.99823 * 21 20 19 43 43 H 1.09000 * 110.24814 * 78.03912 * 23 22 21 44 44 H 1.08998 * 110.25102 * 316.11972 * 23 22 21 45 45 H 1.08995 * 110.97142 * 92.65819 * 24 23 22 46 46 H 1.08998 * 110.96985 * 216.42140 * 24 23 22 47 47 H 1.08999 * 110.48645 * 143.47989 * 25 24 23 48 48 H 1.08998 * 110.48187 * 266.11905 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5663 1.2749 -0.0006 6 7 3.9820 2.6743 0.1215 7 6 4.2918 3.3970 -0.9997 8 1 4.0645 4.4520 -1.0421 9 6 4.8979 2.7735 -2.0816 10 7 4.8070 3.3042 -3.2826 11 14 5.8427 1.1812 -1.8330 12 1 4.9553 0.0278 -2.1285 13 1 7.0129 1.1523 -2.7468 14 1 6.3109 1.0979 -0.4264 15 6 4.0661 3.3008 1.4432 16 6 5.4826 3.2153 1.9503 17 8 6.3171 2.6027 1.3183 18 7 5.8223 3.8195 3.1063 19 6 7.1992 3.7359 3.5995 20 6 7.3153 4.5004 4.9197 21 6 8.7535 4.4136 5.4345 22 7 8.8646 5.1452 6.6989 23 6 8.6484 4.5487 8.0224 24 6 8.4372 5.7395 8.9836 25 6 9.1913 6.8735 8.2513 26 6 9.1773 6.4506 6.7988 27 8 9.4132 7.1817 5.8602 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5138 0.8901 30 1 -0.3634 0.5139 -0.8899 31 1 3.9515 0.8615 -0.9326 32 1 3.9603 0.7042 0.8403 33 1 5.2309 2.8687 -4.0387 34 1 3.4010 2.7827 2.1339 35 1 3.7693 4.3471 1.3690 36 1 5.1550 4.3097 3.6116 37 1 7.8754 4.1735 2.8650 38 1 7.4646 2.6910 3.7606 39 1 6.6392 4.0624 5.6539 40 1 7.0497 5.5453 4.7590 41 1 9.4294 4.8519 4.7002 42 1 9.0195 3.3688 5.5951 43 1 9.5226 3.9715 8.3234 44 1 7.7633 3.9128 8.0096 45 1 7.3781 5.9767 9.0839 46 1 8.8843 5.5389 9.9572 47 1 8.6696 7.8222 8.3775 48 1 10.2154 6.9487 8.6169 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000362229821.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 06:23:11 Heat of formation + Delta-G solvation = -117.585434 kcal Electronic energy + Delta-G solvation = -29692.346338 eV Core-core repulsion = 25363.026187 eV Total energy + Delta-G solvation = -4329.320151 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 341.183 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -40.67150 -39.70372 -38.97248 -36.80804 -36.28470 -35.58887 -34.86739 -33.40952 -31.70416 -30.70211 -29.05491 -27.96173 -27.45860 -26.17278 -25.36121 -22.60432 -22.26664 -21.75709 -20.60315 -19.89207 -19.46282 -17.31323 -17.20364 -16.95702 -16.92448 -16.39056 -16.06948 -15.92608 -15.64347 -15.34245 -15.20861 -14.85932 -14.30062 -14.17499 -14.05824 -13.74719 -13.63567 -13.32655 -13.06783 -12.93918 -12.74964 -12.59954 -12.49892 -12.23514 -12.15099 -11.92366 -11.71183 -11.63257 -11.48931 -11.40253 -11.08091 -10.77716 -10.39647 -10.25865 -10.15961 -10.08215 -9.81042 -9.71574 -9.14291 -8.96516 -8.65370 -8.51590 -7.12428 -6.01309 -3.45964 2.27057 2.61595 3.00645 3.24272 3.34726 3.40774 3.56507 3.67380 3.83463 3.93866 4.01514 4.33625 4.56527 4.56748 4.68399 4.79694 4.84190 4.89349 5.01543 5.08833 5.20603 5.22726 5.30976 5.31183 5.40209 5.41813 5.47337 5.48710 5.52710 5.61324 5.68446 5.84403 5.85881 5.92943 5.95803 6.05826 6.11694 6.20227 6.30873 6.77327 6.84211 7.01903 7.76279 7.86007 7.99034 8.27132 8.53234 8.81883 8.96270 9.62193 9.88162 11.12200 Molecular weight = 341.18amu Principal moments of inertia in cm(-1) A = 0.014887 B = 0.002242 C = 0.002070 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1880.400034 B =12485.058361 C =13520.377347 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.376 6.376 3 C 0.426 3.574 4 O -0.494 6.494 5 C 0.145 3.855 6 N -0.549 5.549 7 C -0.270 4.270 8 H 0.086 0.914 9 C 0.041 3.959 10 N -0.892 5.892 11 Si 0.853 3.147 12 H -0.289 1.289 13 H -0.300 1.300 14 H -0.223 1.223 15 C 0.135 3.865 16 C 0.479 3.521 17 O -0.511 6.511 18 N -0.746 5.746 19 C 0.124 3.876 20 C -0.145 4.145 21 C 0.129 3.871 22 N -0.621 5.621 23 C 0.100 3.900 24 C -0.132 4.132 25 C -0.156 4.156 26 C 0.513 3.487 27 O -0.528 6.528 28 H 0.090 0.910 29 H 0.054 0.946 30 H 0.057 0.943 31 H 0.101 0.899 32 H 0.083 0.917 33 H 0.265 0.735 34 H 0.073 0.927 35 H 0.085 0.915 36 H 0.393 0.607 37 H 0.065 0.935 38 H 0.062 0.938 39 H 0.069 0.931 40 H 0.073 0.927 41 H 0.087 0.913 42 H 0.083 0.917 43 H 0.072 0.928 44 H 0.080 0.920 45 H 0.083 0.917 46 H 0.090 0.910 47 H 0.102 0.898 48 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.288 -1.508 26.953 27.194 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.293 6.293 3 C 0.265 3.735 4 O -0.379 6.379 5 C 0.015 3.985 6 N -0.267 5.267 7 C -0.398 4.398 8 H 0.103 0.897 9 C -0.161 4.161 10 N -0.531 5.531 11 Si 0.682 3.318 12 H -0.218 1.218 13 H -0.228 1.228 14 H -0.145 1.145 15 C 0.005 3.995 16 C 0.264 3.736 17 O -0.384 6.384 18 N -0.402 5.402 19 C -0.001 4.001 20 C -0.184 4.184 21 C 0.006 3.994 22 N -0.356 5.356 23 C -0.023 4.023 24 C -0.170 4.170 25 C -0.196 4.196 26 C 0.301 3.699 27 O -0.404 6.404 28 H 0.108 0.892 29 H 0.073 0.927 30 H 0.076 0.924 31 H 0.119 0.881 32 H 0.101 0.899 33 H 0.075 0.925 34 H 0.091 0.909 35 H 0.103 0.897 36 H 0.227 0.773 37 H 0.083 0.917 38 H 0.080 0.920 39 H 0.088 0.912 40 H 0.091 0.909 41 H 0.105 0.895 42 H 0.101 0.899 43 H 0.090 0.910 44 H 0.098 0.902 45 H 0.101 0.899 46 H 0.109 0.891 47 H 0.120 0.880 48 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges 3.864 -1.286 25.682 26.003 hybrid contribution -0.045 -0.575 0.157 0.598 sum 3.819 -1.861 25.839 26.186 Atomic orbital electron populations 1.23075 0.78596 1.02439 1.01917 1.86621 1.22030 1.35728 1.84936 1.26525 0.94177 0.80844 0.71943 1.90570 1.66766 1.36340 1.44214 1.21209 0.84984 0.88680 1.03616 1.43457 1.72512 1.08624 1.02058 1.18708 1.35282 0.95127 0.90731 0.89692 1.25395 0.96969 0.98510 0.95178 1.69866 1.43424 1.41266 0.98533 0.87333 0.80363 0.82717 0.81430 1.21771 1.22787 1.14516 1.20971 0.90596 1.00283 0.87692 1.22847 0.93548 0.78024 0.79215 1.90727 1.51855 1.40525 1.55285 1.46306 1.10866 1.57459 1.25595 1.21069 0.85132 0.99847 0.94059 1.22153 0.97335 1.01870 0.97085 1.21303 0.96941 0.96791 0.84332 1.48367 1.69798 1.10547 1.06859 1.22099 1.02033 0.96303 0.81861 1.22602 1.01791 0.93935 0.98690 1.22340 1.03467 1.00666 0.93126 1.21029 0.75613 0.81810 0.91468 1.90766 1.49169 1.56338 1.44086 0.89173 0.92713 0.92432 0.88128 0.89944 0.92501 0.90891 0.89747 0.77349 0.91677 0.91996 0.91217 0.90868 0.89494 0.89906 0.90986 0.90207 0.89876 0.89116 0.88005 0.87842 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.49 10.56 101.05 1.07 1.55 16 2 O -0.38 -6.93 10.57 -39.26 -0.41 -7.34 16 3 C 0.43 9.12 8.01 36.01 0.29 9.41 16 4 O -0.49 -11.71 16.19 -18.75 -0.30 -12.02 16 5 C 0.14 3.21 4.85 -5.20 -0.03 3.19 16 6 N -0.55 -13.15 1.15 -175.99 -0.20 -13.35 16 7 C -0.27 -7.71 9.92 -15.06 -0.15 -7.86 16 8 H 0.09 2.61 8.06 -52.48 -0.42 2.19 16 9 C 0.04 1.23 5.30 -17.43 -0.09 1.13 16 10 N -0.89 -27.90 13.97 55.49 0.78 -27.13 16 11 Si 0.85 22.33 24.66 -169.99 -4.19 18.14 16 12 H -0.29 -7.21 6.66 56.52 0.38 -6.84 16 13 H -0.30 -8.09 7.11 56.52 0.40 -7.68 16 14 H -0.22 -5.79 5.40 56.52 0.31 -5.49 16 15 C 0.13 2.57 6.17 -5.19 -0.03 2.54 16 16 C 0.48 9.01 7.86 -10.98 -0.09 8.93 16 17 O -0.51 -11.97 14.54 5.56 0.08 -11.89 16 18 N -0.75 -10.30 5.56 -60.29 -0.33 -10.63 16 19 C 0.12 1.53 5.67 -4.04 -0.02 1.51 16 20 C -0.15 -1.33 5.65 -26.73 -0.15 -1.48 16 21 C 0.13 1.11 5.94 -4.04 -0.02 1.08 16 22 N -0.62 -5.01 2.94 -172.35 -0.51 -5.51 16 23 C 0.10 0.44 7.34 -3.12 -0.02 0.42 16 24 C -0.13 -0.43 7.18 -25.09 -0.18 -0.61 16 25 C -0.16 -0.88 6.86 -26.74 -0.18 -1.06 16 26 C 0.51 5.23 8.03 -10.77 -0.09 5.14 16 27 O -0.53 -7.97 17.60 5.55 0.10 -7.88 16 28 H 0.09 0.95 8.14 -51.93 -0.42 0.53 16 29 H 0.05 0.73 8.13 -51.93 -0.42 0.31 16 30 H 0.06 0.85 8.13 -51.93 -0.42 0.43 16 31 H 0.10 2.45 3.12 -51.93 -0.16 2.29 16 32 H 0.08 1.59 8.12 -51.93 -0.42 1.17 16 33 H 0.27 7.86 8.31 -40.82 -0.34 7.52 16 34 H 0.07 1.17 8.03 -51.93 -0.42 0.76 16 35 H 0.08 1.55 8.08 -51.93 -0.42 1.13 16 36 H 0.39 4.20 8.47 -40.82 -0.35 3.85 16 37 H 0.06 0.94 8.14 -51.93 -0.42 0.52 16 38 H 0.06 0.77 8.14 -51.93 -0.42 0.35 16 39 H 0.07 0.53 8.14 -51.93 -0.42 0.11 16 40 H 0.07 0.78 8.14 -51.93 -0.42 0.36 16 41 H 0.09 0.90 7.93 -51.93 -0.41 0.49 16 42 H 0.08 0.56 8.14 -51.93 -0.42 0.13 16 43 H 0.07 0.24 8.14 -51.93 -0.42 -0.18 16 44 H 0.08 0.28 8.14 -51.93 -0.42 -0.14 16 45 H 0.08 0.25 8.14 -51.93 -0.42 -0.18 16 46 H 0.09 0.12 8.14 -51.93 -0.42 -0.30 16 47 H 0.10 0.53 8.14 -51.93 -0.42 0.11 16 48 H 0.10 0.46 8.14 -51.93 -0.42 0.03 16 LS Contribution 399.79 15.07 6.02 6.02 Total: -1.00 -39.78 399.79 -6.45 -46.24 By element: Atomic # 1 Polarization: 9.24 SS G_CDS: -7.78 Total: 1.46 kcal Atomic # 6 Polarization: 23.59 SS G_CDS: 0.30 Total: 23.89 kcal Atomic # 7 Polarization: -56.35 SS G_CDS: -0.27 Total: -56.62 kcal Atomic # 8 Polarization: -38.59 SS G_CDS: -0.54 Total: -39.13 kcal Atomic # 14 Polarization: 22.33 SS G_CDS: -4.19 Total: 18.14 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -39.78 -6.45 -46.24 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000362229821.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.348 kcal (2) G-P(sol) polarization free energy of solvation -39.783 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.131 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.454 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -46.237 kcal (6) G-S(sol) free energy of system = (1) + (5) -117.585 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds