Wall clock time and date at job start Sat Apr 11 2020 06:33:53
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
*******************************************************************************
* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= -1
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* DEV - DEVELOPER OPTIONS ARE ALLOWED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS USER-SPECIFIED
* DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06
* IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345
* ALPHA - THE SOLVENT ALPHA IS 0.00
* BETA - THE SOLVENT BETA IS 0.00
* GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS
* 38.93 CAL MOL^-1 ANGSTROM^-2
* FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00
* FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 C
2 2 C 1.53007 * 1
3 3 C 1.52993 * 109.47043 * 2 1
4 4 C 1.52999 * 109.46974 * 119.99920 * 2 1 3
5 5 H 1.09001 * 109.47496 * 300.00171 * 4 2 1
6 6 C 1.53006 * 109.47149 * 59.99989 * 4 2 1
7 7 O 1.42900 * 109.47149 * 54.99993 * 6 4 2
8 8 O 1.42900 * 109.47212 * 179.97438 * 4 2 1
9 9 N 1.41605 * 114.00011 * 155.00041 * 8 4 2
10 10 C 1.34773 * 119.99772 * 180.02562 * 9 8 4
11 11 O 1.21589 * 120.00057 * 0.02562 * 10 9 8
12 12 N 1.34784 * 119.99775 * 179.97438 * 10 9 8
13 13 C 1.40135 * 119.99664 * 185.65910 * 12 10 9
14 14 C 1.38693 * 120.07546 * 34.00107 * 13 12 10
15 15 C 1.38200 * 120.02177 * 179.97438 * 14 13 12
16 16 C 1.38549 * 120.17167 * 359.97438 * 15 14 13
17 17 F 1.35100 * 119.92325 * 180.02562 * 16 15 14
18 18 C 1.38346 * 120.15396 * 0.04633 * 16 15 14
19 19 C 1.38738 * 119.97554 * 359.92684 * 18 16 15
20 20 O 1.35779 * 120.08566 * 180.31900 * 19 18 16
21 21 C 1.34807 * 117.00182 * 354.13304 * 20 19 18
22 22 H 1.07999 * 119.99676 * 354.47718 * 21 20 19
23 23 C 1.38630 * 120.00023 * 174.47641 * 21 20 19
24 24 N 1.31574 * 119.99975 * 359.97438 * 23 21 20
25 25 Si 1.86800 * 120.00138 * 180.02562 * 23 21 20
26 26 H 1.48502 * 109.46864 * 59.99843 * 25 23 21
27 27 H 1.48500 * 109.47313 * 179.97438 * 25 23 21
28 28 H 1.48505 * 109.47176 * 300.00177 * 25 23 21
29 29 H 1.08996 * 109.46739 * 299.99881 * 1 2 3
30 30 H 1.08998 * 109.46680 * 60.00545 * 1 2 3
31 31 H 1.09003 * 109.47028 * 179.97438 * 1 2 3
32 32 H 1.08997 * 109.46988 * 239.99380 * 2 1 3
33 33 H 1.09008 * 109.47272 * 60.00013 * 3 2 1
34 34 H 1.09006 * 109.47346 * 179.97438 * 3 2 1
35 35 H 1.09001 * 109.47132 * 300.00047 * 3 2 1
36 36 H 1.09006 * 109.46810 * 174.99906 * 6 4 2
37 37 H 1.08998 * 109.47406 * 294.99996 * 6 4 2
38 38 H 0.96695 * 114.00320 * 179.97438 * 7 6 4
39 39 H 0.96999 * 119.99614 * 359.97438 * 9 8 4
40 40 H 0.96998 * 120.00068 * 5.66725 * 12 10 9
41 41 H 1.07994 * 119.99108 * 359.97268 * 14 13 12
42 42 H 1.07993 * 119.91546 * 180.02562 * 15 14 13
43 43 H 1.07993 * 120.01474 * 180.02562 * 18 16 15
44 44 H 0.97004 * 120.00199 * 179.97438 * 24 23 21
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 6 0.0000 0.0000 0.0000
2 6 1.5301 0.0000 0.0000
3 6 2.0400 1.4424 0.0000
4 6 2.0400 -0.7212 1.2493
5 1 1.6767 -0.2074 2.1393
6 6 1.5300 -2.1638 1.2493
7 8 1.9080 -2.8027 0.0282
8 8 3.4690 -0.7218 1.2490
9 7 4.0452 -0.8346 2.5376
10 6 5.3855 -0.8468 2.6777
11 8 6.1000 -0.7606 1.6977
12 7 5.9339 -0.9536 3.9043
13 6 7.3222 -0.8473 4.0627
14 6 8.0520 0.0030 3.2455
15 6 9.4210 0.1074 3.4030
16 6 10.0685 -0.6356 4.3768
17 9 11.4069 -0.5293 4.5268
18 6 9.3477 -1.4864 5.1957
19 6 7.9730 -1.5955 5.0434
20 8 7.2626 -2.4250 5.8501
21 6 7.9644 -3.2047 6.6967
22 1 9.0433 -3.2176 6.6501
23 6 7.3013 -3.9900 7.6270
24 7 5.9869 -3.9739 7.6840
25 14 8.2739 -5.0700 8.8005
26 1 9.1737 -4.2220 9.6230
27 1 7.3375 -5.8041 9.6890
28 1 9.0838 -6.0419 8.0228
29 1 -0.3633 0.5138 0.8900
30 1 -0.3632 0.5138 -0.8900
31 1 -0.3633 -1.0277 -0.0005
32 1 1.8934 -0.5139 -0.8899
33 1 1.6767 1.9563 0.8900
34 1 3.1301 1.4425 0.0005
35 1 1.6767 1.9563 -0.8900
36 1 1.9647 -2.7028 2.0911
37 1 0.4437 -2.1651 1.3388
38 1 1.6175 -3.7224 -0.0408
39 1 3.4751 -0.9022 3.3195
40 1 5.3677 -1.1042 4.6773
41 1 7.5503 0.5838 2.4857
42 1 9.9875 0.7704 2.7660
43 1 9.8546 -2.0641 5.9543
44 1 5.5228 -4.5236 8.3347
RHF calculation, no. of doubly occupied orbitals= 64
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988).
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93
& DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV
ZINC000836456657.mol2 44
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Sat Apr 11 2020 06:33:53
Heat of formation + Delta-G solvation = -116.526245 kcal
Electronic energy + Delta-G solvation = -29868.973145 eV
Core-core repulsion = 25318.519957 eV
Total energy + Delta-G solvation = -4550.453188 eV
No. of doubly occupied orbitals = 64
Molecular weight
(most abundant/longest-lived isotopes) = 342.147 amu
Computer time = 1.07 seconds
Orbital eigenvalues (eV)
-48.23368 -40.16378 -39.17504 -38.44569 -36.53856 -36.08888 -35.08368 -34.04720
-32.41904 -31.69492 -29.39829 -28.97904 -27.94361 -27.12429 -25.50488 -23.50573
-22.60878 -21.77332 -20.92495 -20.16856 -18.55905 -18.31243 -18.26365 -17.56663
-17.19969 -16.33773 -16.02385 -15.49408 -15.40073 -15.23396 -14.96428 -14.87789
-14.42725 -14.27234 -13.99222 -13.75867 -13.61427 -13.51083 -13.24969 -13.13574
-12.92291 -12.44748 -12.40600 -12.35996 -12.13728 -11.82691 -11.64866 -11.36978
-11.33616 -10.98850 -10.91915 -10.73562 -10.61202 -10.56845 -10.23192 -9.89515
-9.80466 -9.50659 -8.96391 -8.77955 -7.87679 -7.10000 -6.61593 -4.18756
1.65378 1.91135 2.13174 3.07295 3.07596 3.09897 3.46878 3.82987
3.87159 4.07883 4.33328 4.35682 4.44974 4.51036 4.78737 4.87105
4.94712 4.97795 5.05610 5.11946 5.12623 5.25435 5.37144 5.50016
5.57621 5.58025 5.66869 5.75681 5.82889 6.02284 6.08223 6.13878
6.17256 6.54876 6.59861 6.85394 6.91445 6.96770 7.06523 7.08303
7.26543 7.40680 7.65740 7.82992 8.18124 8.84256 8.87881 9.46103
10.55622
Molecular weight = 342.15amu
Principal moments of inertia in cm(-1)
A = 0.010786 B = 0.002948 C = 0.002408
Principal moments of inertia in units of 10**(-40)*gram-cm**2
A = 2595.294866 B = 9494.341829 C =11624.672331
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 C -0.144 4.144
2 C -0.082 4.082
3 C -0.150 4.150
4 C 0.066 3.934
5 H 0.088 0.912
6 C 0.050 3.950
7 O -0.558 6.558
8 O -0.105 6.105
9 N -0.618 5.618
10 C 0.721 3.279
11 O -0.564 6.564
12 N -0.657 5.657
13 C 0.083 3.917
14 C -0.049 4.049
15 C -0.225 4.225
16 C 0.129 3.871
17 F -0.151 7.151
18 C -0.256 4.256
19 C 0.159 3.841
20 O -0.169 6.169
21 C -0.391 4.391
22 H 0.094 0.906
23 C 0.043 3.957
24 N -0.861 5.861
25 Si 0.942 3.058
26 H -0.268 1.268
27 H -0.277 1.277
28 H -0.269 1.269
29 H 0.055 0.945
30 H 0.063 0.937
31 H 0.059 0.941
32 H 0.092 0.908
33 H 0.052 0.948
34 H 0.066 0.934
35 H 0.057 0.943
36 H 0.051 0.949
37 H 0.058 0.942
38 H 0.378 0.622
39 H 0.402 0.598
40 H 0.412 0.588
41 H 0.138 0.862
42 H 0.124 0.876
43 H 0.143 0.857
44 H 0.272 0.728
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges -11.833 6.221 -8.434 15.807
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 C -0.202 4.202
2 C -0.101 4.101
3 C -0.207 4.207
4 C 0.007 3.993
5 H 0.106 0.894
6 C -0.029 4.029
7 O -0.363 6.363
8 O -0.108 6.108
9 N -0.323 5.323
10 C 0.422 3.578
11 O -0.439 6.439
12 N -0.309 5.309
13 C -0.011 4.011
14 C -0.070 4.070
15 C -0.246 4.246
16 C 0.109 3.891
17 F -0.130 7.130
18 C -0.277 4.277
19 C 0.102 3.898
20 O -0.072 6.072
21 C -0.467 4.467
22 H 0.111 0.889
23 C -0.162 4.162
24 N -0.496 5.496
25 Si 0.766 3.234
26 H -0.193 1.193
27 H -0.202 1.202
28 H -0.194 1.194
29 H 0.074 0.926
30 H 0.082 0.918
31 H 0.078 0.922
32 H 0.110 0.890
33 H 0.071 0.929
34 H 0.085 0.915
35 H 0.076 0.924
36 H 0.070 0.930
37 H 0.076 0.924
38 H 0.225 0.775
39 H 0.241 0.759
40 H 0.247 0.753
41 H 0.155 0.845
42 H 0.142 0.858
43 H 0.161 0.839
44 H 0.082 0.918
Dipole moment (debyes) X Y Z Total
from point charges -11.261 6.752 -9.488 16.200
hybrid contribution -0.394 -1.379 1.667 2.199
sum -11.656 5.373 -7.821 15.030
Atomic orbital electron populations
1.21859 0.93925 1.02125 1.02250 1.21027 0.95551 0.96236 0.97329
1.21850 1.02459 0.94846 1.01574 1.22845 0.81571 0.94454 1.00460
0.89414 1.22802 0.98404 0.93949 0.87705 1.86549 1.81633 1.29951
1.38144 1.90687 1.18501 1.96123 1.05489 1.46184 1.04300 1.82633
0.99199 1.15251 0.79997 0.78509 0.84053 1.90932 1.59424 1.56285
1.37210 1.41942 1.06146 1.75489 1.07289 1.16537 0.81371 1.02182
1.01011 1.20520 0.92797 0.95789 0.97871 1.20454 0.94684 1.06560
1.02860 1.17448 0.76383 0.98180 0.97099 1.91412 1.31160 1.95177
1.95242 1.20846 0.94021 1.06893 1.05977 1.18773 0.89567 0.89599
0.91814 1.83929 1.33879 1.44917 1.44474 1.21292 0.91824 1.20166
1.13369 0.88884 1.25265 0.96061 0.97645 0.97188 1.69996 1.06780
1.38246 1.34552 0.85755 0.78815 0.79454 0.79359 1.19341 1.20230
1.19359 0.92585 0.91795 0.92211 0.88992 0.92879 0.91454 0.92392
0.93039 0.92399 0.77527 0.75851 0.75258 0.84468 0.85844 0.83901
0.91844
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 15.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 C -0.14 -0.97 8.84 37.16 0.33 -0.64 16
2 C -0.08 -0.76 2.52 -90.62 -0.23 -0.99 16
3 C -0.15 -1.39 9.05 37.15 0.34 -1.05 16
4 C 0.07 0.67 2.22 -26.73 -0.06 0.61 16
5 H 0.09 0.71 7.94 -51.93 -0.41 0.29 16
6 C 0.05 0.46 6.41 37.16 0.24 0.70 16
7 O -0.56 -6.01 12.74 -40.13 -0.51 -6.52 16
8 O -0.11 -1.57 10.04 -34.82 -0.35 -1.92 16
9 N -0.62 -8.99 6.38 27.64 0.18 -8.82 16
10 C 0.72 13.37 8.44 -86.91 -0.73 12.63 16
11 O -0.56 -12.55 14.50 -12.86 -0.19 -12.73 16
12 N -0.66 -12.15 5.21 -14.07 -0.07 -12.22 16
13 C 0.08 1.74 6.29 -83.44 -0.52 1.21 16
14 C -0.05 -0.96 8.65 -39.43 -0.34 -1.30 16
15 C -0.23 -4.22 10.02 -39.48 -0.40 -4.61 16
16 C 0.13 2.58 7.29 -39.43 -0.29 2.29 16
17 F -0.15 -2.89 17.26 2.25 0.04 -2.85 16
18 C -0.26 -5.57 9.11 -39.36 -0.36 -5.93 16
19 C 0.16 3.64 6.66 -38.94 -0.26 3.38 16
20 O -0.17 -4.36 9.30 0.02 0.00 -4.36 16
21 C -0.39 -10.21 9.44 30.88 0.29 -9.92 16
22 H 0.09 2.29 5.30 -52.49 -0.28 2.01 16
23 C 0.04 1.11 5.49 -17.52 -0.10 1.01 16
24 N -0.86 -23.14 13.67 55.48 0.76 -22.38 16
25 Si 0.94 19.54 29.55 -169.99 -5.02 14.51 16
26 H -0.27 -5.43 7.11 56.52 0.40 -5.02 16
27 H -0.28 -5.62 7.11 56.52 0.40 -5.22 16
28 H -0.27 -5.49 7.11 56.52 0.40 -5.09 16
29 H 0.06 0.33 8.14 -51.93 -0.42 -0.10 16
30 H 0.06 0.39 8.14 -51.93 -0.42 -0.03 16
31 H 0.06 0.38 6.55 -51.93 -0.34 0.04 16
32 H 0.09 1.03 7.56 -51.93 -0.39 0.64 16
33 H 0.05 0.44 8.14 -51.92 -0.42 0.01 16
34 H 0.07 0.78 7.68 -51.93 -0.40 0.38 16
35 H 0.06 0.46 8.14 -51.93 -0.42 0.04 16
36 H 0.05 0.51 8.14 -51.93 -0.42 0.08 16
37 H 0.06 0.39 6.71 -51.93 -0.35 0.04 16
38 H 0.38 2.44 9.12 45.56 0.42 2.86 16
39 H 0.40 4.40 8.45 -40.82 -0.34 4.06 16
40 H 0.41 6.97 8.57 -40.82 -0.35 6.62 16
41 H 0.14 2.62 6.47 -52.49 -0.34 2.28 16
42 H 0.12 2.00 8.06 -52.49 -0.42 1.57 16
43 H 0.14 3.09 5.71 -52.49 -0.30 2.79 16
44 H 0.27 6.76 8.31 -40.82 -0.34 6.42 16
LS Contribution 377.55 15.07 5.69 5.69
Total: -1.00 -33.19 377.55 -6.33 -39.52
By element:
Atomic # 1 Polarization: 19.45 SS G_CDS: -4.76 Total: 14.69 kcal
Atomic # 6 Polarization: -0.52 SS G_CDS: -2.09 Total: -2.61 kcal
Atomic # 7 Polarization: -44.28 SS G_CDS: 0.86 Total: -43.42 kcal
Atomic # 8 Polarization: -24.48 SS G_CDS: -1.05 Total: -25.53 kcal
Atomic # 9 Polarization: -2.89 SS G_CDS: 0.04 Total: -2.85 kcal
Atomic # 14 Polarization: 19.54 SS G_CDS: -5.02 Total: 14.51 kcal
Total LS contribution 5.69 Total: 5.69 kcal
Total: -33.19 -6.33 -39.52 kcal
The number of atoms in the molecule is 44
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
ZINC000836456657.mol2 44
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute -77.005 kcal
(2) G-P(sol) polarization free energy of solvation -33.191 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system -110.196 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.330 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.521 kcal
(6) G-S(sol) free energy of system = (1) + (5) -116.526 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 1.07 seconds