Wall clock time and date at job start Wed Apr 15 2020 11:43:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 N 1.46505 * 109.46754 * 2 1 4 4 C 1.37099 * 119.99946 * 263.88035 * 3 2 1 5 5 H 1.07996 * 119.99818 * 188.42309 * 4 3 2 6 6 C 1.38946 * 119.99837 * 8.42453 * 4 3 2 7 7 N 1.31415 * 120.00352 * 24.55335 * 6 4 3 8 8 Si 1.86808 * 119.99939 * 204.55572 * 6 4 3 9 9 H 1.48499 * 109.47064 * 84.98837 * 8 6 4 10 10 H 1.48502 * 109.46748 * 204.98800 * 8 6 4 11 11 H 1.48501 * 109.46766 * 324.98636 * 8 6 4 12 12 C 1.34773 * 119.99813 * 83.88690 * 3 2 1 13 13 O 1.21300 * 119.99802 * 179.97438 * 12 3 2 14 14 C 1.50700 * 120.00478 * 359.97438 * 12 3 2 15 15 H 1.09002 * 112.82361 * 311.11542 * 14 12 3 16 16 C 1.53520 * 113.58987 * 179.97438 * 14 12 3 17 17 C 1.51599 * 87.34054 * 245.36727 * 16 14 12 18 18 C 1.39216 * 92.65912 * 0.04313 * 17 16 14 19 19 C 1.38339 * 119.72144 * 180.02562 * 18 17 16 20 20 C 1.38141 * 120.36081 * 359.92669 * 19 18 17 21 21 C 1.38187 * 119.96388 * 0.02562 * 20 19 18 22 22 C 1.38250 * 119.94285 * 359.97438 * 21 20 19 23 23 Cl 1.73599 * 119.85299 * 180.02562 * 22 21 20 24 24 H 1.08999 * 109.47159 * 60.00033 * 1 2 3 25 25 H 1.09005 * 109.47107 * 180.02562 * 1 2 3 26 26 H 1.08999 * 109.46955 * 299.99645 * 1 2 3 27 27 H 1.08999 * 109.46955 * 240.00355 * 2 1 3 28 28 H 1.08999 * 109.47159 * 119.99967 * 2 1 3 29 29 H 0.96994 * 120.00096 * 179.97438 * 7 6 4 30 30 H 1.08995 * 113.58351 * 0.02562 * 16 14 12 31 31 H 1.09004 * 113.58521 * 130.73187 * 16 14 12 32 32 H 1.08003 * 119.82229 * 179.97438 * 19 18 17 33 33 H 1.07990 * 120.02145 * 180.02562 * 20 19 18 34 34 H 1.08005 * 120.02530 * 180.02562 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3813 0.0000 4 6 2.3661 1.9854 -1.1806 5 1 2.8520 2.9498 -1.1709 6 6 2.0933 1.3569 -2.3893 7 7 1.1217 0.4754 -2.4671 8 14 3.1077 1.7647 -3.9040 9 1 4.3392 0.9350 -3.9132 10 1 2.3107 1.4813 -5.1245 11 1 3.4795 3.2022 -3.8783 12 6 2.1257 2.0580 1.1606 13 8 2.5304 3.2015 1.1606 14 6 1.7430 1.3942 2.4582 15 1 0.7685 0.9079 2.4131 16 6 1.9233 2.2970 3.6867 17 6 2.9979 1.3330 4.1495 18 6 2.8351 0.5148 3.0350 19 6 3.6135 -0.6205 2.8979 20 6 4.5509 -0.9446 3.8595 21 6 4.7140 -0.1327 4.9657 22 6 3.9390 1.0033 5.1082 23 17 4.1463 2.0220 6.4985 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 1.8933 -0.5138 -0.8900 28 1 1.8934 -0.5138 0.8900 29 1 0.9311 0.0369 -3.3110 30 1 2.3021 3.2903 3.4461 31 1 1.0510 2.3241 4.3398 32 1 3.4883 -1.2566 2.0341 33 1 5.1559 -1.8320 3.7468 34 1 5.4469 -0.3849 5.7179 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000528175153.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 15 2020 11:43:08 Heat of formation + Delta-G solvation = 31.471461 kcal Electronic energy + Delta-G solvation = -19551.937832 eV Core-core repulsion = 16477.415692 eV Total energy + Delta-G solvation = -3074.522140 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 279.077 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -40.57700 -38.20986 -36.40370 -35.43956 -34.55833 -31.86060 -30.39348 -29.47382 -27.56060 -25.77629 -24.03553 -22.32824 -21.77409 -20.62445 -18.54314 -16.98758 -16.89198 -16.24873 -15.51279 -14.89284 -14.78944 -14.14025 -14.01691 -13.44821 -13.19867 -12.81428 -12.77779 -12.66078 -12.05094 -11.78883 -11.52773 -11.43841 -11.30984 -11.13867 -11.06118 -10.81227 -10.59726 -10.40588 -10.36241 -10.15077 -9.89735 -8.95036 -8.90526 -8.50584 -8.16051 -7.80690 -6.40912 -3.82448 1.30932 1.34222 2.27392 3.12082 3.23673 3.28289 3.62399 3.77536 4.08685 4.36472 4.55608 4.77052 4.93777 5.03592 5.11308 5.39959 5.56524 5.60473 5.73365 5.79900 5.90173 6.10730 6.16725 6.23352 6.41850 6.46932 6.52770 6.58130 6.72856 6.75654 6.97028 7.21615 7.42710 7.69419 8.03991 8.45830 9.12904 9.38923 9.93741 10.59160 Molecular weight = 279.08amu Principal moments of inertia in cm(-1) A = 0.026932 B = 0.004886 C = 0.004821 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1039.392210 B = 5729.394107 C = 5806.695865 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.118 3.882 3 N -0.432 5.432 4 C -0.307 4.307 5 H 0.105 0.895 6 C 0.032 3.968 7 N -0.864 5.864 8 Si 0.919 3.081 9 H -0.277 1.277 10 H -0.285 1.285 11 H -0.270 1.270 12 C 0.454 3.546 13 O -0.587 6.587 14 C -0.058 4.058 15 H 0.112 0.888 16 C -0.052 4.052 17 C -0.115 4.115 18 C -0.089 4.089 19 C -0.089 4.089 20 C -0.109 4.109 21 C -0.117 4.117 22 C -0.010 4.010 23 Cl -0.086 7.086 24 H 0.093 0.907 25 H 0.038 0.962 26 H 0.023 0.977 27 H 0.102 0.898 28 H 0.034 0.966 29 H 0.268 0.732 30 H 0.112 0.888 31 H 0.092 0.908 32 H 0.127 0.873 33 H 0.134 0.866 34 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.114 -5.601 11.219 12.716 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.006 4.006 3 N -0.149 5.149 4 C -0.434 4.434 5 H 0.123 0.877 6 C -0.172 4.172 7 N -0.504 5.504 8 Si 0.746 3.254 9 H -0.203 1.203 10 H -0.211 1.211 11 H -0.194 1.194 12 C 0.242 3.758 13 O -0.473 6.473 14 C -0.079 4.079 15 H 0.130 0.870 16 C -0.089 4.089 17 C -0.116 4.116 18 C -0.090 4.090 19 C -0.107 4.107 20 C -0.127 4.127 21 C -0.136 4.136 22 C -0.036 4.036 23 Cl -0.058 7.058 24 H 0.112 0.888 25 H 0.057 0.943 26 H 0.042 0.958 27 H 0.120 0.880 28 H 0.052 0.948 29 H 0.078 0.922 30 H 0.131 0.869 31 H 0.110 0.890 32 H 0.145 0.855 33 H 0.151 0.849 34 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 2.250 -5.088 11.152 12.463 hybrid contribution 0.437 -0.100 -0.656 0.794 sum 2.686 -5.187 10.497 12.013 Atomic orbital electron populations 1.22141 0.96636 0.99924 1.02043 1.21523 0.94557 0.83668 1.00857 1.43762 1.54658 1.11187 1.05268 1.19756 1.36020 1.05596 0.82016 0.87746 1.25192 0.95913 0.97075 0.98983 1.70106 1.25042 1.28406 1.26810 0.86048 0.79853 0.79291 0.80216 1.20344 1.21063 1.19439 1.19239 0.85914 0.86616 0.84076 1.90509 1.52149 1.18313 1.86306 1.21594 0.97252 0.93956 0.95092 0.86994 1.21804 0.94834 0.98818 0.93464 1.22212 0.96662 0.98965 0.93733 1.22105 0.97468 0.94005 0.95403 1.20534 0.94873 0.96108 0.99190 1.20891 0.98404 0.99816 0.93574 1.20827 0.99737 0.93684 0.99310 1.20246 0.99195 0.94401 0.89771 1.98341 1.96823 1.68450 1.42156 0.88844 0.94281 0.95757 0.87970 0.94760 0.92197 0.86946 0.88965 0.85536 0.84865 0.84927 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.99 9.58 37.16 0.36 -2.64 16 2 C 0.12 2.52 5.02 -4.04 -0.02 2.50 16 3 N -0.43 -10.69 2.64 -114.81 -0.30 -11.00 16 4 C -0.31 -8.29 9.43 -14.93 -0.14 -8.44 16 5 H 0.10 3.02 7.30 -52.49 -0.38 2.64 16 6 C 0.03 0.79 4.91 -17.47 -0.09 0.71 16 7 N -0.86 -21.37 8.59 55.50 0.48 -20.90 16 8 Si 0.92 20.07 29.62 -169.99 -5.03 15.04 16 9 H -0.28 -6.02 7.11 56.52 0.40 -5.62 16 10 H -0.28 -6.11 7.11 56.52 0.40 -5.71 16 11 H -0.27 -6.00 7.11 56.52 0.40 -5.60 16 12 C 0.45 10.92 7.12 -10.99 -0.08 10.84 16 13 O -0.59 -16.14 15.30 5.54 0.08 -16.06 16 14 C -0.06 -1.08 3.04 -92.22 -0.28 -1.36 16 15 H 0.11 1.91 6.23 -51.93 -0.32 1.59 16 16 C -0.05 -0.88 7.76 -27.19 -0.21 -1.09 16 17 C -0.11 -1.92 7.27 -103.79 -0.75 -2.68 16 18 C -0.09 -1.54 6.24 -103.79 -0.65 -2.19 16 19 C -0.09 -1.36 9.65 -39.58 -0.38 -1.74 16 20 C -0.11 -1.40 10.04 -39.64 -0.40 -1.80 16 21 C -0.12 -1.53 9.82 -39.60 -0.39 -1.92 16 22 C -0.01 -0.15 6.31 -39.54 -0.25 -0.40 16 23 Cl -0.09 -1.18 28.94 -51.86 -1.50 -2.68 16 24 H 0.09 2.16 6.36 -51.93 -0.33 1.83 16 25 H 0.04 0.68 8.14 -51.93 -0.42 0.26 16 26 H 0.02 0.45 6.53 -51.93 -0.34 0.11 16 27 H 0.10 2.37 5.83 -51.93 -0.30 2.07 16 28 H 0.03 0.64 5.18 -51.93 -0.27 0.38 16 29 H 0.27 6.30 8.31 -40.82 -0.34 5.96 16 30 H 0.11 2.10 7.04 -51.93 -0.37 1.73 16 31 H 0.09 1.27 8.14 -51.93 -0.42 0.85 16 32 H 0.13 1.80 7.21 -52.48 -0.38 1.43 16 33 H 0.13 1.29 8.06 -52.49 -0.42 0.87 16 34 H 0.13 1.39 8.06 -52.48 -0.42 0.96 16 LS Contribution 294.99 15.07 4.45 4.45 Total: -1.00 -28.98 294.99 -8.63 -37.61 By element: Atomic # 1 Polarization: 7.26 SS G_CDS: -3.52 Total: 3.74 kcal Atomic # 6 Polarization: -6.92 SS G_CDS: -3.28 Total: -10.21 kcal Atomic # 7 Polarization: -32.07 SS G_CDS: 0.17 Total: -31.89 kcal Atomic # 8 Polarization: -16.14 SS G_CDS: 0.08 Total: -16.06 kcal Atomic # 14 Polarization: 20.07 SS G_CDS: -5.03 Total: 15.04 kcal Atomic # 17 Polarization: -1.18 SS G_CDS: -1.50 Total: -2.68 kcal Total LS contribution 4.45 Total: 4.45 kcal Total: -28.98 -8.63 -37.61 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000528175153.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 69.083 kcal (2) G-P(sol) polarization free energy of solvation -28.980 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.102 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.631 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.611 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.471 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds