Wall clock time and date at job start Wed Apr 15 2020 11:43:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46912 * 1 3 3 C 1.46898 * 110.99351 * 2 1 4 4 C 1.50698 * 109.47406 * 66.04678 * 3 2 1 5 5 H 1.08003 * 120.00060 * 359.97438 * 4 3 2 6 6 C 1.37878 * 120.00506 * 179.97438 * 4 3 2 7 7 N 1.31516 * 119.99613 * 0.02562 * 6 4 3 8 8 Si 1.86794 * 120.00295 * 180.02562 * 6 4 3 9 9 H 1.48499 * 109.47206 * 0.02562 * 8 6 4 10 10 H 1.48501 * 109.47030 * 120.00593 * 8 6 4 11 11 H 1.48504 * 109.47042 * 240.00317 * 8 6 4 12 12 C 1.46898 * 111.00116 * 236.04684 * 2 1 3 13 13 C 1.50698 * 109.47139 * 293.95153 * 12 2 1 14 14 C 1.34171 * 126.91714 * 270.04473 * 13 12 2 15 15 Cl 1.73603 * 124.93346 * 359.95837 * 14 13 12 16 16 O 1.34438 * 110.12599 * 179.97438 * 14 13 12 17 17 C 1.34838 * 110.89851 * 359.97438 * 16 14 13 18 18 C 1.38916 * 133.47668 * 180.02562 * 17 16 14 19 19 C 1.37868 * 119.82216 * 179.97438 * 18 17 16 20 20 C 1.38735 * 120.68900 * 0.02562 * 19 18 17 21 21 C 1.36743 * 120.41209 * 359.97438 * 20 19 18 22 22 C 1.39414 * 119.71302 * 359.97438 * 21 20 19 23 23 H 1.08997 * 109.46563 * 183.95618 * 1 2 3 24 24 H 1.08994 * 109.47172 * 303.95144 * 1 2 3 25 25 H 1.08997 * 109.46832 * 63.95784 * 1 2 3 26 26 H 1.09003 * 109.46730 * 186.04767 * 3 2 1 27 27 H 1.09004 * 109.47490 * 306.04431 * 3 2 1 28 28 H 0.97004 * 120.00203 * 179.97438 * 7 6 4 29 29 H 1.08997 * 109.47320 * 173.94883 * 12 2 1 30 30 H 1.09004 * 109.47134 * 53.95224 * 12 2 1 31 31 H 1.08003 * 120.08639 * 0.02562 * 18 17 16 32 32 H 1.08003 * 119.65389 * 180.27581 * 19 18 17 33 33 H 1.08004 * 119.79110 * 179.97438 * 20 19 18 34 34 H 1.07996 * 120.14518 * 180.02562 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4691 0.0000 0.0000 3 6 1.9954 1.3715 0.0000 4 6 1.6369 2.0472 1.2984 5 1 1.0739 1.5115 2.0485 6 6 2.0274 3.3492 1.5289 7 7 2.7125 4.0017 0.6154 8 14 1.5836 4.1865 3.1386 9 1 0.8165 3.2438 3.9919 10 1 2.8256 4.5932 3.8439 11 1 0.7564 5.3879 2.8601 12 6 1.9956 -0.7659 -1.1376 13 6 1.6371 -2.2204 -0.9728 14 6 2.3603 -3.1630 -0.3494 15 17 3.8962 -2.8948 0.4140 16 8 1.7227 -4.3454 -0.4020 17 6 0.5523 -4.2318 -1.0619 18 6 -0.4553 -5.1326 -1.3831 19 6 -1.5610 -4.7027 -2.0856 20 6 -1.6797 -3.3771 -2.4772 21 6 -0.6992 -2.4744 -2.1711 22 6 0.4257 -2.8904 -1.4604 23 1 -0.3632 -1.0252 0.0709 24 1 -0.3633 0.5739 0.8524 25 1 -0.3633 0.4512 -0.9233 26 1 3.0797 1.3445 -0.1083 27 1 1.5610 1.9274 -0.8309 28 1 2.9870 4.9179 0.7773 29 1 3.0798 -0.6610 -1.1757 30 1 1.5612 -0.3872 -2.0628 31 1 -0.3730 -6.1667 -1.0827 32 1 -2.3448 -5.4044 -2.3300 33 1 -2.5519 -3.0561 -3.0274 34 1 -0.7963 -1.4434 -2.4777 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000611249369.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 15 2020 11:43:12 Heat of formation + Delta-G solvation = 34.474920 kcal Electronic energy + Delta-G solvation = -19060.975330 eV Core-core repulsion = 15986.583430 eV Total energy + Delta-G solvation = -3074.391900 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 279.077 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -42.48756 -37.98694 -36.98578 -36.57272 -33.25453 -32.12553 -30.57503 -29.48120 -27.31774 -26.54446 -23.89512 -23.32503 -22.33769 -20.89052 -19.59148 -17.64091 -17.09397 -16.40759 -16.25228 -15.91789 -14.84256 -14.42509 -14.35176 -13.98851 -13.90635 -13.48062 -13.15048 -12.58386 -12.32296 -12.00271 -11.90428 -11.84572 -11.41787 -11.30348 -11.08271 -10.89241 -10.78290 -10.64492 -10.47081 -9.92445 -9.78613 -9.21718 -8.69923 -8.43743 -8.05623 -7.25669 -6.02449 -4.03277 0.80873 1.23677 1.27539 2.24360 3.30631 3.31503 3.39040 3.44348 3.63974 4.43477 4.53916 4.72357 4.83188 4.92178 5.14607 5.21018 5.31819 5.34221 5.44758 5.68782 5.93673 5.99746 6.08475 6.20207 6.22224 6.35508 6.36554 6.38436 6.52953 6.76567 7.03440 7.26725 7.32237 7.79974 8.06701 8.18803 8.53299 9.04557 9.60860 11.08502 Molecular weight = 279.08amu Principal moments of inertia in cm(-1) A = 0.020779 B = 0.004876 C = 0.004256 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1347.164075 B = 5741.213314 C = 6577.794539 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.038 3.962 2 N -0.531 5.531 3 C 0.193 3.807 4 C -0.504 4.504 5 H 0.064 0.936 6 C 0.055 3.945 7 N -0.899 5.899 8 Si 0.897 3.103 9 H -0.272 1.272 10 H -0.284 1.284 11 H -0.285 1.285 12 C 0.118 3.882 13 C -0.114 4.114 14 C 0.071 3.929 15 Cl 0.039 6.961 16 O -0.191 6.191 17 C 0.061 3.939 18 C -0.108 4.108 19 C -0.094 4.094 20 C -0.137 4.137 21 C -0.060 4.060 22 C -0.114 4.114 23 H 0.046 0.954 24 H 0.074 0.926 25 H 0.010 0.990 26 H 0.031 0.969 27 H -0.008 1.008 28 H 0.260 0.740 29 H 0.084 0.916 30 H 0.039 0.961 31 H 0.131 0.869 32 H 0.134 0.866 33 H 0.129 0.871 34 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.403 -16.902 -6.515 18.903 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 N -0.256 5.256 3 C 0.068 3.932 4 C -0.543 4.543 5 H 0.082 0.918 6 C -0.146 4.146 7 N -0.539 5.539 8 Si 0.725 3.275 9 H -0.197 1.197 10 H -0.210 1.210 11 H -0.211 1.211 12 C -0.010 4.010 13 C -0.118 4.118 14 C -0.003 4.003 15 Cl 0.068 6.932 16 O -0.095 6.095 17 C 0.013 3.987 18 C -0.126 4.126 19 C -0.112 4.112 20 C -0.155 4.155 21 C -0.078 4.078 22 C -0.116 4.116 23 H 0.064 0.936 24 H 0.093 0.907 25 H 0.029 0.971 26 H 0.049 0.951 27 H 0.010 0.990 28 H 0.070 0.930 29 H 0.102 0.898 30 H 0.057 0.943 31 H 0.149 0.851 32 H 0.152 0.848 33 H 0.147 0.853 34 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -4.912 -17.152 -5.928 18.800 hybrid contribution -0.215 1.033 0.240 1.082 sum -5.126 -16.119 -5.688 17.846 Atomic orbital electron populations 1.22270 0.88783 0.99667 1.00381 1.62161 1.07125 1.17660 1.38655 1.19761 0.95477 0.81156 0.96787 1.21183 1.34641 0.96842 1.01634 0.91787 1.24974 0.95315 0.97334 0.96951 1.69968 1.38499 1.11395 1.34015 0.86458 0.78162 0.79300 0.83613 1.19657 1.21017 1.21138 1.20451 1.00611 0.86238 0.93671 1.20900 0.92851 0.96596 1.01408 1.21984 0.91530 0.84167 1.02627 1.98452 1.21348 1.93962 1.79481 1.83834 1.29135 1.32350 1.64151 1.19483 0.86510 0.95399 0.97281 1.19897 0.91848 0.98603 1.02253 1.20904 0.96600 0.96241 0.97440 1.20773 0.99475 0.93244 1.02043 1.20369 0.91483 1.00190 0.95796 1.19706 0.96293 0.92874 1.02705 0.93556 0.90732 0.97140 0.95071 0.99019 0.93002 0.89794 0.94322 0.85064 0.84806 0.85275 0.85299 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.75 9.05 60.07 0.54 1.29 16 2 N -0.53 -11.57 4.74 -245.82 -1.17 -12.74 16 3 C 0.19 4.99 4.72 -4.98 -0.02 4.97 16 4 C -0.50 -14.14 8.46 -34.44 -0.29 -14.43 16 5 H 0.06 1.80 7.12 -52.48 -0.37 1.42 16 6 C 0.06 1.57 5.46 -17.82 -0.10 1.47 16 7 N -0.90 -26.59 13.29 55.43 0.74 -25.85 16 8 Si 0.90 21.68 29.54 -169.99 -5.02 16.66 16 9 H -0.27 -6.48 7.11 56.52 0.40 -6.08 16 10 H -0.28 -6.82 7.11 56.52 0.40 -6.42 16 11 H -0.29 -6.81 7.11 56.52 0.40 -6.41 16 12 C 0.12 2.19 5.30 -4.98 -0.03 2.16 16 13 C -0.11 -1.94 5.13 -102.61 -0.53 -2.46 16 14 C 0.07 1.17 7.83 29.30 0.23 1.40 16 15 Cl 0.04 0.59 28.80 -51.86 -1.49 -0.90 16 16 O -0.19 -3.02 10.58 3.85 0.04 -2.98 16 17 C 0.06 0.88 7.42 -38.48 -0.29 0.59 16 18 C -0.11 -1.20 10.07 -39.47 -0.40 -1.60 16 19 C -0.09 -0.89 10.01 -39.53 -0.40 -1.29 16 20 C -0.14 -1.42 9.98 -39.94 -0.40 -1.81 16 21 C -0.06 -0.78 9.42 -39.68 -0.37 -1.15 16 22 C -0.11 -1.74 5.36 -105.16 -0.56 -2.31 16 23 H 0.05 0.84 5.92 -51.93 -0.31 0.54 16 24 H 0.07 1.59 6.76 -51.93 -0.35 1.24 16 25 H 0.01 0.19 8.14 -51.93 -0.42 -0.23 16 26 H 0.03 0.85 7.93 -51.93 -0.41 0.44 16 27 H -0.01 -0.22 8.12 -51.93 -0.42 -0.64 16 28 H 0.26 7.27 8.31 -40.82 -0.34 6.93 16 29 H 0.08 1.54 7.66 -51.93 -0.40 1.14 16 30 H 0.04 0.69 8.12 -51.93 -0.42 0.27 16 31 H 0.13 1.15 8.06 -52.48 -0.42 0.73 16 32 H 0.13 0.84 8.06 -52.48 -0.42 0.42 16 33 H 0.13 0.99 8.06 -52.48 -0.42 0.57 16 34 H 0.13 1.60 8.06 -52.49 -0.42 1.18 16 LS Contribution 306.80 15.07 4.62 4.62 Total: -1.00 -30.45 306.80 -8.82 -39.27 By element: Atomic # 1 Polarization: -0.97 SS G_CDS: -3.93 Total: -4.90 kcal Atomic # 6 Polarization: -10.57 SS G_CDS: -2.61 Total: -13.17 kcal Atomic # 7 Polarization: -38.16 SS G_CDS: -0.43 Total: -38.59 kcal Atomic # 8 Polarization: -3.02 SS G_CDS: 0.04 Total: -2.98 kcal Atomic # 14 Polarization: 21.68 SS G_CDS: -5.02 Total: 16.66 kcal Atomic # 17 Polarization: 0.59 SS G_CDS: -1.49 Total: -0.90 kcal Total LS contribution 4.62 Total: 4.62 kcal Total: -30.45 -8.82 -39.27 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000611249369.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 73.744 kcal (2) G-P(sol) polarization free energy of solvation -30.448 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.295 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.820 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.269 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.475 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds