Wall clock time and date at job start Wed Apr 15 2020 11:43:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.36919 * 125.07816 * 2 1 4 4 O 1.35679 * 125.09125 * 359.93278 * 3 2 1 5 5 C 1.42904 * 116.99851 * 174.81174 * 4 3 2 6 6 H 1.09003 * 109.47211 * 20.91541 * 5 4 3 7 7 C 1.50703 * 109.46931 * 140.91236 * 5 4 3 8 8 H 1.07995 * 120.00329 * 0.02562 * 7 5 4 9 9 C 1.37880 * 119.99874 * 180.02562 * 7 5 4 10 10 N 1.31509 * 119.99873 * 359.97438 * 9 7 5 11 11 Si 1.86801 * 119.99716 * 179.97438 * 9 7 5 12 12 H 1.48497 * 109.47108 * 90.00040 * 11 9 7 13 13 H 1.48508 * 109.46867 * 209.99758 * 11 9 7 14 14 H 1.48496 * 109.47340 * 329.99705 * 11 9 7 15 15 C 1.52993 * 109.47678 * 260.91227 * 5 4 3 16 16 Cl 1.80302 * 109.46978 * 65.45963 * 15 5 4 17 17 C 1.34952 * 109.80879 * 179.97438 * 3 2 1 18 18 C 1.46435 * 106.98478 * 0.02562 * 17 3 2 19 19 C 1.39652 * 133.96065 * 180.02562 * 18 17 3 20 20 C 1.36665 * 119.76270 * 180.02562 * 19 18 17 21 21 C 1.38782 * 120.51704 * 359.95163 * 20 19 18 22 22 C 1.37854 * 120.65785 * 0.02804 * 21 20 19 23 23 C 1.38015 * 125.07894 * 179.97438 * 2 1 3 24 24 H 1.08999 * 109.47022 * 85.10886 * 1 2 3 25 25 H 1.08994 * 109.47010 * 205.10853 * 1 2 3 26 26 H 1.08996 * 109.46967 * 325.10936 * 1 2 3 27 27 H 0.97000 * 120.00055 * 180.02562 * 10 9 7 28 28 H 1.08996 * 109.47694 * 185.46304 * 15 5 4 29 29 H 1.09001 * 109.47208 * 305.46594 * 15 5 4 30 30 H 1.08006 * 126.50742 * 179.74208 * 17 3 2 31 31 H 1.08006 * 120.11557 * 0.02562 * 19 18 17 32 32 H 1.08002 * 119.74516 * 179.97438 * 20 19 18 33 33 H 1.07998 * 119.67423 * 180.02562 * 21 20 19 34 34 H 1.08000 * 120.09977 * 180.02562 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2519 1.1205 0.0000 4 8 1.7916 2.3968 -0.0013 5 6 2.7643 3.4374 0.1141 6 1 3.7416 3.0556 -0.1814 7 6 2.3809 4.5852 -0.7841 8 1 1.4840 4.5262 -1.3827 9 6 3.1753 5.7107 -0.8415 10 7 4.2672 5.7827 -0.1121 11 14 2.7004 7.1331 -1.9553 12 1 1.8390 8.0825 -1.2058 13 1 3.9270 7.8337 -2.4137 14 1 1.9579 6.6141 -3.1319 15 6 2.8232 3.9221 1.5640 16 17 3.4362 2.5933 2.6174 17 6 3.5537 0.7651 0.0006 18 6 3.5976 -0.6986 0.0003 19 6 4.6314 -1.6375 0.0011 20 6 4.3360 -2.9718 0.0001 21 6 3.0164 -3.4015 -0.0008 22 6 1.9808 -2.4915 -0.0011 23 6 2.2582 -1.1295 0.0005 24 1 -0.3633 0.0876 -1.0239 25 1 -0.3633 -0.9305 0.4360 26 1 -0.3633 0.8429 0.5878 27 1 4.8258 6.5747 -0.1522 28 1 3.4929 4.7792 1.6337 29 1 1.8250 4.2134 1.8906 30 1 4.4022 1.4334 -0.0032 31 1 5.6607 -1.3102 0.0026 32 1 5.1357 -3.6977 0.0003 33 1 2.7985 -4.4593 -0.0012 34 1 0.9572 -2.8359 -0.0014 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001226234294.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 15 2020 11:43:27 Heat of formation + Delta-G solvation = 13.260055 kcal Electronic energy + Delta-G solvation = -19350.109076 eV Core-core repulsion = 16274.797230 eV Total energy + Delta-G solvation = -3075.311845 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 279.077 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -40.92955 -38.04686 -36.25064 -34.76626 -33.41909 -32.30977 -30.04809 -29.51274 -27.68781 -25.83745 -25.36858 -22.60684 -21.49500 -20.93902 -19.28446 -17.46751 -16.76953 -16.38573 -15.71109 -15.35480 -14.87202 -14.12026 -13.93299 -13.72048 -13.64438 -13.38174 -12.63030 -12.56900 -12.44489 -12.11951 -12.01523 -11.72811 -11.29495 -11.13095 -11.12037 -10.82897 -10.49968 -10.46651 -10.20776 -9.73044 -9.44222 -9.27781 -8.90776 -8.72850 -7.56040 -6.83472 -6.47096 -4.55850 1.58431 1.98822 2.76586 3.10165 3.18404 3.22443 3.36591 3.41930 4.06973 4.31318 4.48936 4.89481 5.04238 5.05238 5.31960 5.37904 5.46784 5.68741 5.78274 5.83194 5.90854 6.15249 6.18212 6.23361 6.34052 6.52734 6.71419 6.80372 6.95506 7.04886 7.10954 7.27031 7.45606 7.55062 7.63090 7.72723 8.34361 8.64164 9.12099 10.59678 Molecular weight = 279.08amu Principal moments of inertia in cm(-1) A = 0.023196 B = 0.005215 C = 0.005000 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1206.831543 B = 5367.768964 C = 5598.673311 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.084 3.916 2 N -0.486 5.486 3 C 0.319 3.681 4 O -0.312 6.312 5 C 0.224 3.776 6 H 0.057 0.943 7 C -0.526 4.526 8 H 0.076 0.924 9 C 0.066 3.934 10 N -0.886 5.886 11 Si 0.917 3.083 12 H -0.276 1.276 13 H -0.281 1.281 14 H -0.270 1.270 15 C -0.035 4.035 16 Cl -0.236 7.236 17 C -0.290 4.290 18 C -0.068 4.068 19 C -0.085 4.085 20 C -0.147 4.147 21 C -0.124 4.124 22 C -0.121 4.121 23 C 0.087 3.913 24 H 0.065 0.935 25 H 0.076 0.924 26 H 0.082 0.918 27 H 0.273 0.727 28 H 0.135 0.865 29 H 0.072 0.928 30 H 0.150 0.850 31 H 0.118 0.882 32 H 0.115 0.885 33 H 0.117 0.883 34 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.465 -10.628 0.954 11.219 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 N -0.179 5.179 3 C 0.167 3.833 4 O -0.223 6.223 5 C 0.169 3.831 6 H 0.074 0.926 7 C -0.564 4.564 8 H 0.094 0.906 9 C -0.138 4.138 10 N -0.523 5.523 11 Si 0.743 3.257 12 H -0.201 1.201 13 H -0.207 1.207 14 H -0.194 1.194 15 C -0.098 4.098 16 Cl -0.210 7.210 17 C -0.314 4.314 18 C -0.073 4.073 19 C -0.103 4.103 20 C -0.166 4.166 21 C -0.143 4.143 22 C -0.142 4.142 23 C -0.016 4.016 24 H 0.083 0.917 25 H 0.095 0.905 26 H 0.101 0.899 27 H 0.083 0.917 28 H 0.153 0.847 29 H 0.091 0.909 30 H 0.167 0.833 31 H 0.136 0.864 32 H 0.133 0.867 33 H 0.135 0.865 34 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges -3.785 -10.423 1.059 11.139 hybrid contribution -0.143 0.872 -0.355 0.952 sum -3.928 -9.551 0.704 10.351 Atomic orbital electron populations 1.21814 0.77583 1.03574 1.02785 1.43349 1.05548 1.02764 1.66252 1.18161 0.87535 0.81334 0.96246 1.85786 1.39811 1.09668 1.87052 1.20572 0.88527 0.82707 0.91300 0.92562 1.21038 1.11030 0.99620 1.24719 0.90633 1.24961 0.94287 0.98636 0.95907 1.69796 1.13403 1.29834 1.39269 0.86166 0.78220 0.80863 0.80418 1.20140 1.20663 1.19419 1.25677 1.01575 0.91554 0.90983 1.98654 1.90693 1.58295 1.73380 1.21277 0.94687 0.92783 1.22657 1.19004 0.91825 0.93336 1.03095 1.20217 0.97875 0.91975 1.00277 1.20491 0.96173 0.95284 1.04668 1.20584 0.92291 0.98186 1.03281 1.19858 0.99044 0.89007 1.06306 1.17975 0.89870 0.87308 1.06487 0.91672 0.90550 0.89917 0.91690 0.84702 0.90938 0.83280 0.86439 0.86731 0.86498 0.86994 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.17 10.96 59.85 0.66 1.83 16 2 N -0.49 -8.89 3.19 -121.90 -0.39 -9.28 16 3 C 0.32 6.76 6.92 -16.45 -0.11 6.64 16 4 O -0.31 -7.14 9.63 -18.74 -0.18 -7.33 16 5 C 0.22 5.39 2.21 -27.89 -0.06 5.33 16 6 H 0.06 1.45 5.70 -51.93 -0.30 1.15 16 7 C -0.53 -13.47 8.89 -34.44 -0.31 -13.78 16 8 H 0.08 1.94 7.81 -52.49 -0.41 1.53 16 9 C 0.07 1.65 5.29 -17.82 -0.09 1.55 16 10 N -0.89 -22.74 11.29 55.43 0.63 -22.12 16 11 Si 0.92 19.59 29.54 -169.99 -5.02 14.57 16 12 H -0.28 -5.80 7.11 56.52 0.40 -5.40 16 13 H -0.28 -5.97 7.11 56.52 0.40 -5.56 16 14 H -0.27 -5.76 7.11 56.52 0.40 -5.36 16 15 C -0.04 -0.80 6.18 37.15 0.23 -0.57 16 16 Cl -0.24 -4.99 27.18 -51.86 -1.41 -6.40 16 17 C -0.29 -6.11 8.86 -37.45 -0.33 -6.44 16 18 C -0.07 -1.29 6.37 -105.14 -0.67 -1.96 16 19 C -0.08 -1.38 10.05 -39.62 -0.40 -1.78 16 20 C -0.15 -2.05 9.97 -39.95 -0.40 -2.45 16 21 C -0.12 -1.66 10.02 -39.52 -0.40 -2.06 16 22 C -0.12 -1.78 9.89 -39.44 -0.39 -2.17 16 23 C 0.09 1.54 6.81 -83.87 -0.57 0.97 16 24 H 0.06 0.83 8.14 -51.93 -0.42 0.41 16 25 H 0.08 0.84 7.85 -51.93 -0.41 0.44 16 26 H 0.08 1.16 8.14 -51.93 -0.42 0.74 16 27 H 0.27 6.64 8.31 -40.82 -0.34 6.30 16 28 H 0.14 3.26 5.94 -51.93 -0.31 2.96 16 29 H 0.07 1.59 8.14 -51.93 -0.42 1.16 16 30 H 0.15 3.27 6.54 -52.48 -0.34 2.92 16 31 H 0.12 1.72 8.06 -52.48 -0.42 1.30 16 32 H 0.11 1.28 8.06 -52.49 -0.42 0.85 16 33 H 0.12 1.21 8.06 -52.49 -0.42 0.79 16 34 H 0.11 1.35 7.91 -52.49 -0.41 0.93 16 LS Contribution 303.24 15.07 4.57 4.57 Total: -1.00 -27.19 303.24 -8.50 -35.69 By element: Atomic # 1 Polarization: 9.01 SS G_CDS: -3.85 Total: 5.16 kcal Atomic # 6 Polarization: -12.02 SS G_CDS: -2.85 Total: -14.87 kcal Atomic # 7 Polarization: -31.63 SS G_CDS: 0.24 Total: -31.39 kcal Atomic # 8 Polarization: -7.14 SS G_CDS: -0.18 Total: -7.33 kcal Atomic # 14 Polarization: 19.59 SS G_CDS: -5.02 Total: 14.57 kcal Atomic # 17 Polarization: -4.99 SS G_CDS: -1.41 Total: -6.40 kcal Total LS contribution 4.57 Total: 4.57 kcal Total: -27.19 -8.50 -35.69 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001226234294.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.955 kcal (2) G-P(sol) polarization free energy of solvation -27.192 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.763 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.503 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.695 kcal (6) G-S(sol) free energy of system = (1) + (5) 13.260 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds