Wall clock time and date at job start Wed Apr 15 2020 11:43:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46492 * 1 3 3 C 1.36941 * 125.06348 * 2 1 4 4 C 1.34214 * 109.89388 * 179.97438 * 3 2 1 5 5 C 1.46491 * 106.98955 * 359.73699 * 4 3 2 6 6 C 1.37691 * 125.07053 * 179.97438 * 2 1 3 7 7 C 1.39181 * 133.38390 * 0.04341 * 6 2 1 8 8 C 1.37756 * 120.02532 * 179.97438 * 7 6 2 9 9 C 1.38747 * 120.72060 * 359.97438 * 8 7 6 10 10 C 1.38160 * 120.31729 * 0.03761 * 9 8 7 11 11 O 1.35877 * 120.22341 * 179.97438 * 10 9 8 12 12 C 1.42906 * 116.99983 * 5.64632 * 11 10 9 13 13 H 1.09001 * 109.46795 * 21.64604 * 12 11 10 14 14 C 1.50699 * 109.46889 * 141.64489 * 12 11 10 15 15 H 1.07996 * 120.00479 * 0.02562 * 14 12 11 16 16 C 1.37885 * 119.99493 * 179.97438 * 14 12 11 17 17 N 1.31521 * 119.99552 * 179.97438 * 16 14 12 18 18 Si 1.86793 * 119.99966 * 0.02562 * 16 14 12 19 19 H 1.48493 * 109.47184 * 269.99401 * 18 16 14 20 20 H 1.48495 * 109.47313 * 29.99988 * 18 16 14 21 21 H 1.48509 * 109.47017 * 149.99938 * 18 16 14 22 22 C 1.52995 * 109.46942 * 261.64504 * 12 11 10 23 23 Cl 1.80308 * 109.46806 * 65.00164 * 22 12 11 24 24 H 1.08997 * 109.47481 * 270.04345 * 1 2 3 25 25 H 1.09008 * 109.47504 * 30.04537 * 1 2 3 26 26 H 1.09005 * 109.46998 * 150.04494 * 1 2 3 27 27 H 1.07993 * 125.05509 * 359.97438 * 3 2 1 28 28 H 1.07996 * 126.50257 * 180.02562 * 4 3 2 29 29 H 1.07997 * 119.98239 * 0.02562 * 7 6 2 30 30 H 1.08003 * 119.63638 * 180.02562 * 8 7 6 31 31 H 1.08006 * 119.83694 * 180.02562 * 9 8 7 32 32 H 0.97001 * 119.99673 * 180.02562 * 17 16 14 33 33 H 1.08997 * 109.46829 * 184.99775 * 22 12 11 34 34 H 1.08996 * 109.47182 * 305.00077 * 22 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2516 1.1209 0.0000 4 6 3.5470 0.7697 0.0006 5 6 3.5935 -0.6945 0.0074 6 6 2.2561 -1.1269 0.0005 7 6 1.9775 -2.4906 0.0003 8 6 3.0081 -3.4047 0.0005 9 6 4.3298 -2.9826 0.0002 10 6 4.6314 -1.6343 0.0006 11 8 5.9265 -1.2232 0.0009 12 6 6.9283 -2.2345 -0.1246 13 1 6.4911 -3.1248 -0.5766 14 6 8.0481 -1.7269 -0.9959 15 1 7.9999 -0.7314 -1.4120 16 6 9.1349 -2.5331 -1.2612 17 7 10.1119 -2.0902 -2.0221 18 14 9.2185 -4.2545 -0.5410 19 1 9.8918 -4.2056 0.7816 20 1 7.8432 -4.7899 -0.3768 21 1 9.9873 -5.1368 -1.4553 22 6 7.4775 -2.5828 1.2603 23 17 6.1706 -3.3267 2.2553 24 1 -0.3634 0.0008 1.0276 25 1 -0.3634 0.8896 -0.5146 26 1 -0.3633 -0.8904 -0.5132 27 1 1.8844 2.1364 -0.0004 28 1 4.3942 1.4394 0.0011 29 1 0.9530 -2.8321 -0.0007 30 1 2.7848 -4.4613 -0.0001 31 1 5.1267 -3.7117 -0.0001 32 1 10.8763 -2.6575 -2.2090 33 1 8.3019 -3.2884 1.1573 34 1 7.8342 -1.6759 1.7484 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001229039938.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 15 2020 11:43:30 Heat of formation + Delta-G solvation = 26.274249 kcal Electronic energy + Delta-G solvation = -19424.160210 eV Core-core repulsion = 16349.412702 eV Total energy + Delta-G solvation = -3074.747508 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 279.077 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -40.95013 -38.66276 -35.84512 -35.12708 -33.33898 -32.45048 -30.55942 -29.16760 -28.08925 -26.08191 -25.18539 -22.67258 -21.79673 -20.71033 -19.55597 -17.64587 -16.76425 -16.38741 -15.69913 -15.30856 -15.16102 -14.73877 -14.48964 -13.70019 -13.45228 -13.20125 -13.09207 -12.72899 -12.53827 -12.44213 -12.19528 -12.05967 -11.42254 -11.17277 -11.00887 -10.88440 -10.65246 -10.60157 -10.06363 -9.78689 -9.54266 -9.28189 -8.90203 -8.56279 -7.82599 -6.82165 -6.39923 -4.43886 1.66555 2.07979 2.94461 3.00687 3.01789 3.06504 3.15228 3.18919 4.07090 4.13386 4.38349 4.77358 4.88588 5.03175 5.12369 5.14920 5.31842 5.50082 5.60772 5.70593 5.75381 5.83966 5.91986 5.98510 6.11587 6.30761 6.48739 6.59074 6.86644 6.99706 7.03128 7.12455 7.25029 7.47629 7.61496 7.99964 8.43238 8.73934 9.14710 10.71606 Molecular weight = 279.08amu Principal moments of inertia in cm(-1) A = 0.025084 B = 0.005722 C = 0.005218 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1115.959432 B = 4892.289249 C = 5364.671144 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.085 3.915 2 N -0.495 5.495 3 C 0.018 3.982 4 C -0.168 4.168 5 C -0.146 4.146 6 C 0.132 3.868 7 C -0.194 4.194 8 C -0.051 4.051 9 C -0.242 4.242 10 C 0.207 3.793 11 O -0.290 6.290 12 C 0.182 3.818 13 H 0.052 0.948 14 C -0.524 4.524 15 H 0.094 0.906 16 C 0.082 3.918 17 N -0.876 5.876 18 Si 0.861 3.139 19 H -0.268 1.268 20 H -0.256 1.256 21 H -0.281 1.281 22 C -0.052 4.052 23 Cl -0.218 7.218 24 H 0.063 0.937 25 H 0.078 0.922 26 H 0.076 0.924 27 H 0.163 0.837 28 H 0.147 0.853 29 H 0.110 0.890 30 H 0.119 0.881 31 H 0.134 0.866 32 H 0.273 0.727 33 H 0.087 0.913 34 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.658 0.931 4.826 16.411 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 N -0.180 5.180 3 C -0.105 4.105 4 C -0.192 4.192 5 C -0.150 4.150 6 C 0.026 3.974 7 C -0.215 4.215 8 C -0.071 4.071 9 C -0.262 4.262 10 C 0.159 3.841 11 O -0.202 6.202 12 C 0.126 3.874 13 H 0.069 0.931 14 C -0.562 4.562 15 H 0.112 0.888 16 C -0.123 4.123 17 N -0.512 5.512 18 Si 0.688 3.312 19 H -0.195 1.195 20 H -0.180 1.180 21 H -0.207 1.207 22 C -0.115 4.115 23 Cl -0.192 7.192 24 H 0.081 0.919 25 H 0.096 0.904 26 H 0.095 0.905 27 H 0.180 0.820 28 H 0.164 0.836 29 H 0.128 0.872 30 H 0.137 0.863 31 H 0.152 0.848 32 H 0.083 0.917 33 H 0.105 0.895 34 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -15.803 1.098 4.811 16.556 hybrid contribution 0.243 -1.158 0.471 1.273 sum -15.561 -0.059 5.282 16.433 Atomic orbital electron populations 1.21805 0.77819 1.03658 1.02391 1.43694 1.05353 1.04355 1.64624 1.21614 0.90384 0.90668 1.07798 1.21661 0.95736 0.92963 1.08888 1.18340 0.90467 0.93194 1.13032 1.17889 0.89063 0.88042 1.02392 1.19633 0.98778 0.88976 1.14098 1.20470 0.91554 0.98298 0.96733 1.21126 0.97595 0.94819 1.12694 1.18480 0.83973 0.91159 0.90516 1.86128 1.11528 1.37227 1.85274 1.20873 0.87009 0.89011 0.90529 0.93111 1.20827 1.01865 1.04476 1.29018 0.88780 1.24826 0.94993 0.97859 0.94634 1.69818 1.08528 1.37158 1.35661 0.87227 0.79753 0.85021 0.79159 1.19501 1.18038 1.20700 1.26186 0.90819 0.99937 0.94528 1.98670 1.58551 1.86140 1.75853 0.91866 0.90370 0.90475 0.81985 0.83574 0.87234 0.86304 0.84845 0.91710 0.89525 0.88161 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.75 11.02 59.84 0.66 1.41 16 2 N -0.49 -6.80 3.18 -121.80 -0.39 -7.19 16 3 C 0.02 0.24 11.29 -16.69 -0.19 0.05 16 4 C -0.17 -2.83 11.08 -37.68 -0.42 -3.25 16 5 C -0.15 -2.83 6.32 -105.03 -0.66 -3.49 16 6 C 0.13 2.23 6.80 -84.01 -0.57 1.66 16 7 C -0.19 -3.02 9.94 -39.41 -0.39 -3.41 16 8 C -0.05 -0.84 10.01 -39.57 -0.40 -1.24 16 9 C -0.24 -4.73 7.21 -39.42 -0.28 -5.01 16 10 C 0.21 4.38 6.25 -38.94 -0.24 4.13 16 11 O -0.29 -6.78 9.70 -19.35 -0.19 -6.97 16 12 C 0.18 4.31 1.74 -27.89 -0.05 4.26 16 13 H 0.05 1.21 4.55 -51.93 -0.24 0.98 16 14 C -0.52 -14.27 9.47 -34.44 -0.33 -14.60 16 15 H 0.09 2.82 8.06 -52.49 -0.42 2.40 16 16 C 0.08 2.22 5.45 -17.81 -0.10 2.12 16 17 N -0.88 -25.15 13.96 55.43 0.77 -24.38 16 18 Si 0.86 19.79 24.41 -169.99 -4.15 15.64 16 19 H -0.27 -5.92 6.83 56.52 0.39 -5.54 16 20 H -0.26 -5.64 6.53 56.52 0.37 -5.27 16 21 H -0.28 -6.42 7.11 56.52 0.40 -6.02 16 22 C -0.05 -1.12 5.83 37.16 0.22 -0.91 16 23 Cl -0.22 -4.27 25.69 -51.86 -1.33 -5.61 16 24 H 0.06 0.48 8.14 -51.93 -0.42 0.06 16 25 H 0.08 0.51 8.14 -51.92 -0.42 0.08 16 26 H 0.08 0.61 8.10 -51.93 -0.42 0.19 16 27 H 0.16 1.54 8.06 -52.49 -0.42 1.11 16 28 H 0.15 2.36 8.06 -52.49 -0.42 1.93 16 29 H 0.11 1.38 8.06 -52.49 -0.42 0.95 16 30 H 0.12 1.62 8.06 -52.48 -0.42 1.20 16 31 H 0.13 2.69 4.81 -52.48 -0.25 2.44 16 32 H 0.27 7.26 8.31 -40.82 -0.34 6.92 16 33 H 0.09 1.88 3.21 -51.93 -0.17 1.71 16 34 H 0.10 2.08 8.14 -51.93 -0.42 1.66 16 LS Contribution 293.51 15.07 4.42 4.42 Total: -1.00 -30.28 293.51 -7.25 -37.53 By element: Atomic # 1 Polarization: 8.46 SS G_CDS: -3.64 Total: 4.82 kcal Atomic # 6 Polarization: -15.52 SS G_CDS: -2.75 Total: -18.27 kcal Atomic # 7 Polarization: -31.95 SS G_CDS: 0.39 Total: -31.57 kcal Atomic # 8 Polarization: -6.78 SS G_CDS: -0.19 Total: -6.97 kcal Atomic # 14 Polarization: 19.79 SS G_CDS: -4.15 Total: 15.64 kcal Atomic # 17 Polarization: -4.27 SS G_CDS: -1.33 Total: -5.61 kcal Total LS contribution 4.42 Total: 4.42 kcal Total: -30.28 -7.25 -37.53 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001229039938.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.807 kcal (2) G-P(sol) polarization free energy of solvation -30.279 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.527 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.253 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.532 kcal (6) G-S(sol) free energy of system = (1) + (5) 26.274 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds