Wall clock time and date at job start Wed Apr 15 2020 11:43:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17406 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 N 1.46495 * 109.47127 * 329.37562 * 3 2 1 5 5 C 1.36945 * 119.99571 * 273.42241 * 4 3 2 6 6 H 1.08000 * 120.00153 * 186.85159 * 5 4 3 7 7 C 1.38807 * 119.99916 * 6.85885 * 5 4 3 8 8 N 1.31620 * 120.00600 * 24.25897 * 7 5 4 9 9 Si 1.86800 * 119.99996 * 204.26166 * 7 5 4 10 10 H 1.48495 * 109.47184 * 59.99501 * 9 7 5 11 11 H 1.48497 * 109.47514 * 179.97438 * 9 7 5 12 12 H 1.48509 * 109.46920 * 299.99853 * 9 7 5 13 13 C 1.46496 * 120.00453 * 93.42860 * 4 3 2 14 14 C 1.50697 * 109.47060 * 269.99694 * 13 4 3 15 15 C 1.38170 * 120.02349 * 260.02450 * 14 13 4 16 16 C 1.38345 * 120.04334 * 179.97438 * 15 14 13 17 17 Cl 1.73598 * 119.95823 * 179.97438 * 16 15 14 18 18 C 1.38386 * 120.08522 * 359.97438 * 16 15 14 19 19 C 1.38123 * 120.04409 * 359.74411 * 18 16 15 20 20 C 1.38702 * 120.02278 * 79.99654 * 14 13 4 21 21 O 1.35924 * 120.03882 * 0.02562 * 20 14 13 22 22 C 1.42903 * 116.99986 * 179.97438 * 21 20 14 23 23 H 4.40635 * 5.51425 * 179.97438 * 4 1 2 24 24 H 1.08993 * 109.46909 * 209.37009 * 3 2 1 25 25 H 1.09001 * 109.46624 * 89.37150 * 3 2 1 26 26 H 0.96999 * 120.00355 * 180.02562 * 8 7 5 27 27 H 1.09003 * 109.47082 * 149.99855 * 13 4 3 28 28 H 1.08996 * 109.46983 * 29.99615 * 13 4 3 29 29 H 1.07999 * 119.97459 * 359.95297 * 15 14 13 30 30 H 1.08000 * 119.97742 * 180.02562 * 18 16 15 31 31 H 1.08002 * 120.02516 * 180.27336 * 19 18 16 32 32 H 1.08999 * 109.47133 * 60.00125 * 22 21 20 33 33 H 1.08991 * 109.47216 * 180.02562 * 22 21 20 34 34 H 1.09000 * 109.47014 * 300.00231 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1741 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1349 -1.1877 0.7036 5 6 3.2963 -1.1603 2.0632 6 1 3.7596 -1.9945 2.5689 7 6 2.8644 -0.0603 2.7913 8 7 1.9117 0.7123 2.3139 9 14 3.6354 0.3238 4.4489 10 1 5.0915 0.5577 4.2753 11 1 3.0035 1.5409 5.0187 12 1 3.4244 -0.8217 5.3703 13 6 3.4512 -2.4052 -0.0472 14 6 2.2227 -3.2734 -0.1369 15 6 2.0735 -4.3503 0.7158 16 6 0.9456 -5.1473 0.6342 17 17 0.7607 -6.5002 1.7062 18 6 -0.0354 -4.8675 -0.3008 19 6 0.1074 -3.7884 -1.1511 20 6 1.2407 -2.9916 -1.0750 21 8 1.3857 -1.9326 -1.9147 22 6 0.3353 -1.7024 -2.8559 23 1 -1.0498 -0.0002 0.0004 24 1 3.0089 0.8964 0.5040 25 1 3.0093 -0.0105 -1.0276 26 1 1.6102 1.4812 2.8226 27 1 4.2451 -2.9507 0.4629 28 1 3.7810 -2.1377 -1.0510 29 1 2.8380 -4.5702 1.4463 30 1 -0.9153 -5.4906 -0.3628 31 1 -0.6605 -3.5676 -1.8778 32 1 -0.5988 -1.5272 -2.3222 33 1 0.5764 -0.8299 -3.4631 34 1 0.2275 -2.5747 -3.5005 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000281380032.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 15 2020 11:43:16 Heat of formation + Delta-G solvation = 73.501093 kcal Electronic energy + Delta-G solvation = -19921.745940 eV Core-core repulsion = 16849.046342 eV Total energy + Delta-G solvation = -3072.699598 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 279.077 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -39.81855 -37.23410 -36.19582 -35.59606 -32.25653 -31.31168 -30.09508 -29.41461 -27.09977 -26.03629 -25.61316 -22.27227 -21.75826 -20.47606 -17.66681 -17.40584 -16.30524 -15.92512 -15.75648 -15.40904 -14.79769 -14.16783 -13.68428 -13.61265 -13.34491 -13.18304 -12.84205 -12.43006 -11.92189 -11.71948 -11.52772 -11.32680 -11.26796 -10.93309 -10.78753 -10.57255 -10.40580 -10.28816 -10.24076 -9.88949 -8.76531 -8.73952 -8.48359 -8.18750 -7.58318 -7.07256 -5.75733 -3.10783 1.70049 1.72420 2.55102 3.39911 3.46424 3.47220 3.72050 4.06288 4.38820 4.55750 4.70117 5.08030 5.15651 5.31732 5.37566 5.47691 5.59010 5.72831 5.76326 5.82439 5.95974 6.03773 6.11107 6.32998 6.51391 6.58761 6.67098 6.82573 6.85965 7.13904 7.38162 7.56242 7.76341 7.82656 8.25157 9.12924 9.43521 9.78649 10.22239 11.24655 Molecular weight = 279.08amu Principal moments of inertia in cm(-1) A = 0.014572 B = 0.007903 C = 0.005838 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1921.016885 B = 3542.032286 C = 4795.176976 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.326 4.326 2 C -0.056 4.056 3 C 0.271 3.729 4 N -0.576 5.576 5 C -0.260 4.260 6 H 0.078 0.922 7 C 0.003 3.997 8 N -0.885 5.885 9 Si 0.899 3.101 10 H -0.284 1.284 11 H -0.292 1.292 12 H -0.285 1.285 13 C 0.189 3.811 14 C -0.104 4.104 15 C -0.064 4.064 16 C -0.071 4.071 17 Cl -0.092 7.092 18 C -0.089 4.089 19 C -0.204 4.204 20 C 0.153 3.847 21 O -0.294 6.294 22 C 0.032 3.968 23 H 0.179 0.821 24 H 0.091 0.909 25 H 0.040 0.960 26 H 0.254 0.746 27 H 0.060 0.940 28 H 0.058 0.942 29 H 0.132 0.868 30 H 0.123 0.877 31 H 0.126 0.874 32 H 0.054 0.946 33 H 0.094 0.906 34 H 0.045 0.955 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.034 -7.746 -9.164 12.171 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.346 4.346 2 C -0.059 4.059 3 C 0.147 3.853 4 N -0.294 5.294 5 C -0.388 4.388 6 H 0.096 0.904 7 C -0.196 4.196 8 N -0.528 5.528 9 Si 0.729 3.271 10 H -0.210 1.210 11 H -0.218 1.218 12 H -0.211 1.211 13 C 0.062 3.938 14 C -0.109 4.109 15 C -0.084 4.084 16 C -0.098 4.098 17 Cl -0.064 7.064 18 C -0.109 4.109 19 C -0.223 4.223 20 C 0.107 3.893 21 O -0.206 6.206 22 C -0.064 4.064 23 H 0.197 0.803 24 H 0.109 0.891 25 H 0.058 0.942 26 H 0.065 0.935 27 H 0.079 0.921 28 H 0.076 0.924 29 H 0.150 0.850 30 H 0.141 0.859 31 H 0.144 0.856 32 H 0.073 0.927 33 H 0.112 0.888 34 H 0.063 0.937 Dipole moment (debyes) X Y Z Total from point charges -1.888 -7.512 -8.977 11.857 hybrid contribution -0.804 -0.022 1.240 1.478 sum -2.692 -7.534 -7.737 11.130 Atomic orbital electron populations 1.23836 0.94997 1.05986 1.09776 1.23877 0.94785 0.95064 0.92141 1.17961 0.83279 0.91138 0.92959 1.44507 1.74182 1.06584 1.04114 1.19235 1.33612 1.03318 0.82671 0.90409 1.24810 0.97330 0.99354 0.98111 1.70141 1.25560 1.18441 1.38666 0.86401 0.79331 0.77569 0.83798 1.21035 1.21805 1.21095 1.19871 0.91083 0.86655 0.96239 1.20535 1.00529 0.95827 0.93964 1.20699 0.96371 0.93215 0.98132 1.20684 0.98411 0.93564 0.97149 1.98315 1.97659 1.45227 1.65168 1.20550 0.97890 0.97500 0.94926 1.21011 0.98819 0.98535 1.03940 1.18818 0.93441 0.86633 0.90453 1.86179 1.44300 1.44637 1.45504 1.22936 0.91151 1.01078 0.91199 0.80322 0.89095 0.94249 0.93491 0.92120 0.92377 0.85028 0.85872 0.85586 0.92730 0.88794 0.93659 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 20. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.33 -7.50 18.50 29.55 0.55 -6.96 16 2 C -0.06 -1.33 8.61 -37.12 -0.32 -1.65 16 3 C 0.27 6.38 4.98 -6.83 -0.03 6.34 16 4 N -0.58 -13.69 2.48 -177.96 -0.44 -14.14 16 5 C -0.26 -6.82 9.70 -15.06 -0.15 -6.96 16 6 H 0.08 2.00 7.93 -52.49 -0.42 1.58 16 7 C 0.00 0.07 4.95 -17.43 -0.09 -0.01 16 8 N -0.89 -24.85 8.90 55.49 0.49 -24.36 16 9 Si 0.90 21.48 29.62 -169.99 -5.03 16.44 16 10 H -0.28 -6.68 7.11 56.52 0.40 -6.28 16 11 H -0.29 -7.11 7.11 56.52 0.40 -6.71 16 12 H -0.28 -6.83 7.11 56.52 0.40 -6.43 16 13 C 0.19 3.75 5.51 -5.20 -0.03 3.72 16 14 C -0.10 -2.01 5.48 -104.48 -0.57 -2.58 16 15 C -0.06 -1.18 9.45 -39.57 -0.37 -1.56 16 16 C -0.07 -1.22 6.32 -39.49 -0.25 -1.47 16 17 Cl -0.09 -1.41 28.95 -51.86 -1.50 -2.91 16 18 C -0.09 -1.42 9.82 -39.57 -0.39 -1.81 16 19 C -0.20 -3.28 9.04 -39.44 -0.36 -3.64 16 20 C 0.15 2.78 6.04 -39.22 -0.24 2.54 16 21 O -0.29 -5.08 6.73 -19.50 -0.13 -5.21 16 22 C 0.03 0.41 9.52 101.05 0.96 1.38 16 23 H 0.18 3.63 7.80 -54.10 -0.42 3.21 16 24 H 0.09 2.34 6.41 -51.93 -0.33 2.01 16 25 H 0.04 0.83 7.73 -51.93 -0.40 0.43 16 26 H 0.25 7.10 8.31 -40.82 -0.34 6.76 16 27 H 0.06 1.13 7.89 -51.93 -0.41 0.72 16 28 H 0.06 1.07 7.58 -51.93 -0.39 0.67 16 29 H 0.13 2.32 8.04 -52.49 -0.42 1.90 16 30 H 0.12 1.65 8.06 -52.49 -0.42 1.23 16 31 H 0.13 1.70 6.30 -52.49 -0.33 1.36 16 32 H 0.05 0.72 7.40 -51.93 -0.38 0.34 16 33 H 0.09 1.06 8.14 -51.93 -0.42 0.63 16 34 H 0.04 0.49 7.68 -51.93 -0.40 0.09 16 LS Contribution 305.15 15.07 4.60 4.60 Total: -1.00 -29.52 305.15 -7.19 -36.71 By element: Atomic # 1 Polarization: 5.41 SS G_CDS: -3.89 Total: 1.52 kcal Atomic # 6 Polarization: -11.37 SS G_CDS: -1.28 Total: -12.65 kcal Atomic # 7 Polarization: -38.55 SS G_CDS: 0.05 Total: -38.49 kcal Atomic # 8 Polarization: -5.08 SS G_CDS: -0.13 Total: -5.21 kcal Atomic # 14 Polarization: 21.48 SS G_CDS: -5.03 Total: 16.44 kcal Atomic # 17 Polarization: -1.41 SS G_CDS: -1.50 Total: -2.91 kcal Total LS contribution 4.60 Total: 4.60 kcal Total: -29.52 -7.19 -36.71 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000281380032.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 110.216 kcal (2) G-P(sol) polarization free energy of solvation -29.524 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 80.691 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.190 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.715 kcal (6) G-S(sol) free energy of system = (1) + (5) 73.501 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds