Wall clock time and date at job start Wed Apr 15 2020 11:43:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.37101 * 119.99714 * 2 1 4 4 H 1.08001 * 119.99379 * 185.50194 * 3 2 1 5 5 C 1.38948 * 120.00306 * 5.50518 * 3 2 1 6 6 N 1.31413 * 119.99833 * 5.50802 * 5 3 2 7 7 Si 1.86800 * 119.99766 * 185.51571 * 5 3 2 8 8 H 1.48499 * 109.47314 * 59.99900 * 7 5 3 9 9 H 1.48500 * 109.46894 * 179.97438 * 7 5 3 10 10 H 1.48496 * 109.47051 * 299.99480 * 7 5 3 11 11 C 1.34769 * 119.99994 * 179.97438 * 2 1 3 12 12 O 1.21295 * 120.00134 * 185.60472 * 11 2 1 13 13 C 1.50698 * 120.00000 * 5.60905 * 11 2 1 14 14 C 1.50701 * 115.55018 * 65.67877 * 13 11 2 15 15 C 1.38264 * 119.99515 * 29.54594 * 14 13 11 16 16 C 1.38218 * 120.03053 * 179.72523 * 15 14 13 17 17 C 1.38240 * 120.01082 * 0.27547 * 16 15 14 18 18 C 1.38333 * 119.98576 * 359.97438 * 17 16 15 19 19 Cl 1.73598 * 120.01016 * 180.02562 * 18 17 16 20 20 C 1.38192 * 119.99493 * 209.82217 * 14 13 11 21 21 C 1.53005 * 117.50187 * 211.34726 * 13 11 2 22 22 C 1.53003 * 117.50107 * 280.01025 * 13 11 2 23 23 H 1.08995 * 109.47237 * 174.90059 * 1 2 3 24 24 H 1.09003 * 109.47186 * 294.90808 * 1 2 3 25 25 H 1.09006 * 109.47165 * 54.90239 * 1 2 3 26 26 H 0.97000 * 119.99326 * 180.02562 * 6 5 3 27 27 H 1.08004 * 119.98316 * 0.02562 * 15 14 13 28 28 H 1.07997 * 119.99708 * 180.25451 * 16 15 14 29 29 H 1.07997 * 120.00748 * 180.02562 * 17 16 15 30 30 H 1.07999 * 120.01217 * 0.02562 * 20 14 13 31 31 H 1.08991 * 117.49944 * 215.00493 * 21 13 11 32 32 H 1.08997 * 117.49264 * 0.02597 * 21 13 11 33 33 H 1.08995 * 117.49563 * 359.97438 * 22 13 11 34 34 H 1.08998 * 117.49756 * 144.97518 * 22 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1505 1.1874 0.0000 4 1 3.2267 1.1895 -0.0897 5 6 1.4605 2.3879 0.1154 6 7 0.1646 2.3827 0.3331 7 14 2.3752 4.0093 -0.0390 8 1 3.0159 4.0909 -1.3762 9 1 1.4190 5.1342 0.1206 10 1 3.4177 4.0919 1.0153 11 6 2.1389 -1.1671 0.0005 12 8 3.3475 -1.1696 0.1031 13 6 1.3908 -2.4691 -0.1265 14 6 0.6892 -2.6901 -1.4418 15 6 1.1942 -2.1247 -2.5981 16 6 0.5546 -2.3316 -3.8057 17 6 -0.5939 -3.0993 -3.8572 18 6 -1.1026 -3.6609 -2.6999 19 17 -2.5444 -4.6256 -2.7640 20 6 -0.4620 -3.4530 -1.4912 21 6 1.9816 -3.6947 0.5736 22 6 0.7231 -3.0261 1.1325 23 1 -0.3633 -1.0235 -0.0913 24 1 -0.3634 0.4328 0.9321 25 1 -0.3634 0.5909 -0.8408 26 1 -0.3171 3.2208 0.4133 27 1 2.0917 -1.5252 -2.5583 28 1 0.9518 -1.8931 -4.7092 29 1 -1.0935 -3.2612 -4.8010 30 1 -0.8592 -3.8906 -0.5872 31 1 1.8630 -4.6605 0.0828 32 1 2.9112 -3.5590 1.1263 33 1 0.8254 -2.4509 2.0527 34 1 -0.2237 -3.5519 1.0094 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000299545652.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 15 2020 11:43:20 Heat of formation + Delta-G solvation = 25.919535 kcal Electronic energy + Delta-G solvation = -19656.468357 eV Core-core repulsion = 16581.705468 eV Total energy + Delta-G solvation = -3074.762889 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 279.077 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -40.07850 -38.23456 -36.47831 -35.84397 -34.60151 -31.53954 -30.57871 -30.43798 -26.51226 -25.12363 -23.60267 -22.65514 -21.90383 -21.23527 -18.53109 -17.27576 -16.86481 -15.98710 -15.22924 -15.01620 -14.78349 -14.34712 -14.13703 -13.78212 -13.46661 -13.29093 -13.04501 -12.19316 -11.81496 -11.66493 -11.56852 -11.48158 -11.23815 -11.13415 -10.97768 -10.82054 -10.77962 -10.45189 -10.37670 -10.14834 -9.94332 -9.06347 -8.71277 -8.48254 -8.30090 -7.86897 -6.26014 -3.83692 1.32597 1.38951 2.17549 3.14990 3.22026 3.25764 3.62853 3.77625 4.05129 4.30336 4.71382 4.77966 4.92032 5.08154 5.15368 5.32888 5.44491 5.49341 5.52922 5.62281 5.80476 5.89647 6.04575 6.15808 6.19907 6.35330 6.46321 6.49680 6.56302 6.76581 6.95288 7.11802 7.42838 7.53897 8.03996 8.46284 9.15719 9.42645 9.96693 10.67380 Molecular weight = 279.08amu Principal moments of inertia in cm(-1) A = 0.020807 B = 0.005569 C = 0.005079 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1345.384792 B = 5026.812057 C = 5511.323756 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.117 3.883 2 N -0.433 5.433 3 C -0.302 4.302 4 H 0.103 0.897 5 C 0.028 3.972 6 N -0.884 5.884 7 Si 0.931 3.069 8 H -0.273 1.273 9 H -0.283 1.283 10 H -0.273 1.273 11 C 0.470 3.530 12 O -0.593 6.593 13 C -0.101 4.101 14 C -0.012 4.012 15 C -0.094 4.094 16 C -0.103 4.103 17 C -0.121 4.121 18 C -0.032 4.032 19 Cl -0.082 7.082 20 C -0.114 4.114 21 C -0.139 4.139 22 C -0.163 4.163 23 H 0.028 0.972 24 H 0.073 0.927 25 H 0.060 0.940 26 H 0.267 0.733 27 H 0.132 0.868 28 H 0.131 0.869 29 H 0.129 0.871 30 H 0.133 0.867 31 H 0.095 0.905 32 H 0.105 0.895 33 H 0.101 0.899 34 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.237 -10.526 -5.011 12.780 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.027 4.027 2 N -0.149 5.149 3 C -0.430 4.430 4 H 0.121 0.879 5 C -0.174 4.174 6 N -0.525 5.525 7 Si 0.758 3.242 8 H -0.199 1.199 9 H -0.209 1.209 10 H -0.198 1.198 11 C 0.257 3.743 12 O -0.479 6.479 13 C -0.105 4.105 14 C -0.012 4.012 15 C -0.112 4.112 16 C -0.121 4.121 17 C -0.139 4.139 18 C -0.059 4.059 19 Cl -0.053 7.053 20 C -0.132 4.132 21 C -0.176 4.176 22 C -0.201 4.201 23 H 0.046 0.954 24 H 0.091 0.909 25 H 0.078 0.922 26 H 0.077 0.923 27 H 0.150 0.850 28 H 0.149 0.851 29 H 0.147 0.853 30 H 0.151 0.849 31 H 0.114 0.886 32 H 0.124 0.876 33 H 0.120 0.880 34 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -4.958 -10.403 -4.939 12.538 hybrid contribution -0.051 0.893 -0.106 0.901 sum -5.009 -9.510 -5.045 11.873 Atomic orbital electron populations 1.21767 0.80098 0.96735 1.04077 1.43603 1.06140 1.04416 1.60775 1.19774 0.93503 0.81995 1.47713 0.87881 1.25325 0.95832 0.99758 0.96504 1.70157 1.07018 1.27317 1.47963 0.85913 0.78800 0.80383 0.79107 1.19878 1.20873 1.19808 1.18595 0.87032 0.83009 0.85690 1.90513 1.13972 1.86448 1.56939 1.20111 1.03310 0.96093 0.90986 1.18865 0.93444 0.95598 0.93330 1.21225 1.00215 0.98126 0.91625 1.21073 0.94904 0.97961 0.98183 1.20965 0.97124 0.98776 0.97075 1.20760 0.90630 0.99169 0.95313 1.98346 1.37678 1.70453 1.98806 1.20877 0.95460 1.00220 0.96678 1.22991 0.98032 0.94534 1.02035 1.23154 0.96882 1.03292 0.96727 0.95370 0.90854 0.92180 0.92268 0.85036 0.85123 0.85318 0.84890 0.88619 0.87637 0.88047 0.88318 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.12 2.70 8.51 59.85 0.51 3.21 16 2 N -0.43 -11.02 3.03 -122.19 -0.37 -11.39 16 3 C -0.30 -8.33 9.55 -14.93 -0.14 -8.47 16 4 H 0.10 2.97 7.20 -52.49 -0.38 2.59 16 5 C 0.03 0.73 5.42 -17.47 -0.09 0.64 16 6 N -0.88 -23.12 9.54 55.50 0.53 -22.59 16 7 Si 0.93 20.62 29.56 -169.99 -5.02 15.60 16 8 H -0.27 -6.00 7.11 56.52 0.40 -5.60 16 9 H -0.28 -6.13 7.11 56.52 0.40 -5.73 16 10 H -0.27 -6.05 7.11 56.52 0.40 -5.65 16 11 C 0.47 11.34 5.70 -10.99 -0.06 11.28 16 12 O -0.59 -16.33 16.31 5.54 0.09 -16.24 16 13 C -0.10 -1.90 1.23 -156.81 -0.19 -2.09 16 14 C -0.01 -0.20 4.02 -104.63 -0.42 -0.62 16 15 C -0.09 -1.61 9.32 -39.58 -0.37 -1.98 16 16 C -0.10 -1.45 10.05 -39.59 -0.40 -1.85 16 17 C -0.12 -1.58 9.83 -39.55 -0.39 -1.97 16 18 C -0.03 -0.44 6.32 -39.50 -0.25 -0.69 16 19 Cl -0.08 -0.99 28.96 -51.86 -1.50 -2.49 16 20 C -0.11 -1.68 9.08 -39.55 -0.36 -2.04 16 21 C -0.14 -2.22 9.73 -26.69 -0.26 -2.48 16 22 C -0.16 -2.56 8.93 -26.69 -0.24 -2.80 16 23 H 0.03 0.57 4.77 -51.93 -0.25 0.32 16 24 H 0.07 1.80 6.88 -51.93 -0.36 1.44 16 25 H 0.06 1.47 7.25 -51.93 -0.38 1.10 16 26 H 0.27 6.65 8.31 -40.82 -0.34 6.31 16 27 H 0.13 2.53 7.33 -52.48 -0.38 2.14 16 28 H 0.13 1.52 8.06 -52.49 -0.42 1.10 16 29 H 0.13 1.38 8.06 -52.49 -0.42 0.96 16 30 H 0.13 1.75 5.95 -52.49 -0.31 1.44 16 31 H 0.10 1.30 8.14 -51.93 -0.42 0.88 16 32 H 0.11 1.80 8.00 -51.93 -0.42 1.38 16 33 H 0.10 1.67 8.14 -51.93 -0.42 1.24 16 34 H 0.10 1.28 6.10 -51.93 -0.32 0.97 16 LS Contribution 300.59 15.07 4.53 4.53 Total: -1.00 -29.54 300.59 -8.03 -37.57 By element: Atomic # 1 Polarization: 8.50 SS G_CDS: -3.61 Total: 4.89 kcal Atomic # 6 Polarization: -7.20 SS G_CDS: -2.67 Total: -9.86 kcal Atomic # 7 Polarization: -34.15 SS G_CDS: 0.16 Total: -33.99 kcal Atomic # 8 Polarization: -16.33 SS G_CDS: 0.09 Total: -16.24 kcal Atomic # 14 Polarization: 20.62 SS G_CDS: -5.02 Total: 15.60 kcal Atomic # 17 Polarization: -0.99 SS G_CDS: -1.50 Total: -2.49 kcal Total LS contribution 4.53 Total: 4.53 kcal Total: -29.54 -8.03 -37.57 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000299545652.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.492 kcal (2) G-P(sol) polarization free energy of solvation -29.544 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.947 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.028 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.572 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.920 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds