Wall clock time and date at job start Wed Apr 15 2020 11:43:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.52999 * 109.47274 * 2 1 4 4 H 1.09000 * 109.47302 * 55.00045 * 3 2 1 5 5 C 1.50699 * 109.47186 * 175.00587 * 3 2 1 6 6 H 1.07998 * 120.00646 * 119.99995 * 5 3 2 7 7 C 1.37882 * 119.99408 * 299.99630 * 5 3 2 8 8 N 1.31514 * 120.00039 * 0.02562 * 7 5 3 9 9 Si 1.86805 * 119.99617 * 180.02562 * 7 5 3 10 10 H 1.48500 * 109.47150 * 60.00020 * 9 7 5 11 11 H 1.48497 * 109.46854 * 180.02562 * 9 7 5 12 12 H 1.48498 * 109.47049 * 299.99613 * 9 7 5 13 13 N 1.46509 * 109.46771 * 295.00102 * 3 2 1 14 14 C 1.38647 * 119.99739 * 85.00441 * 13 3 2 15 15 N 1.32542 * 119.55015 * 0.02562 * 14 13 3 16 16 C 1.31659 * 121.79521 * 179.97438 * 15 14 13 17 17 C 1.50706 * 119.66787 * 180.02562 * 16 15 14 18 18 C 1.39584 * 120.65839 * 0.02562 * 16 15 14 19 19 C 1.43201 * 120.47574 * 180.02562 * 18 16 15 20 20 N 7.86534 * 40.95305 * 340.87849 * 2 1 3 21 21 C 1.40337 * 119.04028 * 359.97438 * 18 16 15 22 22 C 1.37995 * 118.36276 * 0.02562 * 21 18 16 23 23 Cl 1.73602 * 120.38226 * 179.97438 * 22 21 18 24 24 H 1.08994 * 109.47140 * 59.99840 * 1 2 3 25 25 H 1.08995 * 109.47194 * 180.02562 * 1 2 3 26 26 H 1.09002 * 109.46825 * 299.99852 * 1 2 3 27 27 H 1.08995 * 109.46841 * 239.99747 * 2 1 3 28 28 H 1.09002 * 109.46872 * 120.00039 * 2 1 3 29 29 H 0.97006 * 119.99433 * 180.02562 * 8 7 5 30 30 H 0.96996 * 119.99592 * 264.99819 * 13 3 2 31 31 H 1.08996 * 109.46884 * 90.00032 * 17 16 15 32 32 H 1.09003 * 109.46740 * 210.00296 * 17 16 15 33 33 H 1.08999 * 109.47115 * 330.00144 * 17 16 15 34 34 H 1.07997 * 120.82063 * 180.27471 * 21 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 1 1.6055 1.9815 0.8418 5 6 3.5420 1.4442 0.1237 6 1 4.1473 1.8888 -0.6524 7 6 4.1433 0.8783 1.2279 8 7 3.4063 0.3366 2.1728 9 14 6.0051 0.8811 1.3816 10 1 6.4996 2.2813 1.3819 11 1 6.3979 0.2166 2.6501 12 1 6.5975 0.1471 0.2347 13 7 1.6525 2.0974 -1.2519 14 6 0.4002 2.6807 -1.3702 15 7 -0.4389 2.6409 -0.3451 16 6 -1.6381 3.1807 -0.4088 17 6 -2.5534 3.1080 0.7863 18 6 -2.0701 3.8196 -1.5723 19 6 -3.3750 4.4059 -1.6372 20 7 -4.4102 4.8708 -1.6887 21 6 -1.2068 3.8800 -2.6770 22 6 0.0410 3.3011 -2.5663 23 17 1.1506 3.3446 -3.9007 24 1 -0.3633 0.5138 -0.8899 25 1 -0.3633 -1.0276 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 1.8933 -0.5139 -0.8899 28 1 1.8933 -0.5139 0.8900 29 1 3.8294 -0.0612 2.9497 30 1 2.2719 2.1231 -1.9978 31 1 -2.3922 3.9795 1.4207 32 1 -3.5899 3.0903 0.4494 33 1 -2.3399 2.2017 1.3528 34 1 -1.5098 4.3710 -3.5899 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000292662337.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 15 2020 11:43:30 Heat of formation + Delta-G solvation = 53.116914 kcal Electronic energy + Delta-G solvation = -19239.076697 eV Core-core repulsion = 16197.785925 eV Total energy + Delta-G solvation = -3041.290771 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 279.083 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -40.38355 -37.08424 -36.43058 -35.91277 -33.34696 -32.63294 -31.44151 -30.41748 -27.71384 -26.73405 -23.73137 -22.59515 -22.37177 -19.83305 -18.92202 -17.62433 -16.72110 -16.05423 -15.12403 -14.91867 -14.69432 -14.06046 -13.86454 -13.46610 -13.15691 -12.99433 -12.84250 -12.73565 -12.58047 -12.23505 -12.12557 -11.78060 -11.40098 -11.34920 -11.06606 -10.98696 -10.92042 -10.50050 -10.28145 -9.90057 -9.70084 -9.34571 -9.12988 -9.01177 -8.53015 -7.19726 -6.22694 -4.32399 1.00211 1.25788 2.19681 2.85404 3.16727 3.20445 3.26090 3.27214 3.65880 4.01608 4.11535 4.26204 4.55982 4.70907 5.08578 5.11375 5.41419 5.52933 5.65766 5.79938 5.97400 6.02903 6.27045 6.32079 6.39660 6.55758 6.90787 7.00758 7.22090 7.33405 7.53300 7.55481 7.66445 7.78429 8.05741 8.11440 8.50153 8.76459 9.34348 10.82310 Molecular weight = 279.08amu Principal moments of inertia in cm(-1) A = 0.020817 B = 0.005441 C = 0.004659 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1344.750068 B = 5144.405136 C = 6008.796773 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C -0.128 4.128 3 C 0.270 3.730 4 H 0.061 0.939 5 C -0.540 4.540 6 H 0.061 0.939 7 C 0.071 3.929 8 N -0.880 5.880 9 Si 0.901 3.099 10 H -0.276 1.276 11 H -0.285 1.285 12 H -0.276 1.276 13 N -0.666 5.666 14 C 0.457 3.543 15 N -0.511 5.511 16 C 0.247 3.753 17 C -0.113 4.113 18 C -0.181 4.181 19 C 0.282 3.718 20 N -0.448 5.448 21 C 0.030 3.970 22 C -0.186 4.186 23 Cl -0.064 7.064 24 H 0.033 0.967 25 H 0.023 0.977 26 H 0.056 0.944 27 H 0.031 0.969 28 H 0.102 0.898 29 H 0.266 0.734 30 H 0.405 0.595 31 H 0.087 0.913 32 H 0.072 0.928 33 H 0.090 0.910 34 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.387 3.503 -6.383 9.685 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.193 4.193 2 C -0.167 4.167 3 C 0.169 3.831 4 H 0.079 0.921 5 C -0.579 4.579 6 H 0.079 0.921 7 C -0.133 4.133 8 N -0.517 5.517 9 Si 0.728 3.272 10 H -0.201 1.201 11 H -0.211 1.211 12 H -0.201 1.201 13 N -0.286 5.286 14 C 0.213 3.787 15 N -0.230 5.230 16 C 0.099 3.901 17 C -0.170 4.170 18 C -0.192 4.192 19 C -0.032 4.032 20 N -0.125 5.125 21 C 0.003 3.997 22 C -0.221 4.221 23 Cl -0.035 7.035 24 H 0.052 0.948 25 H 0.042 0.958 26 H 0.075 0.925 27 H 0.050 0.950 28 H 0.120 0.880 29 H 0.076 0.924 30 H 0.242 0.758 31 H 0.106 0.894 32 H 0.091 0.909 33 H 0.109 0.891 34 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges -7.365 3.542 -5.448 9.822 hybrid contribution 1.580 0.181 -1.176 1.978 sum -5.785 3.724 -6.624 9.550 Atomic orbital electron populations 1.21852 0.98325 0.98147 1.00936 1.21950 0.92720 0.99480 1.02527 1.19031 0.94462 0.89396 0.80234 0.92142 1.21159 0.90525 1.39618 1.06555 0.92128 1.24827 0.98648 0.94546 0.95248 1.69863 1.35297 1.37245 1.09292 0.86512 0.84720 0.78416 0.77531 1.20119 1.21054 1.20127 1.45959 1.10235 1.53179 1.19252 1.18403 0.87598 0.86044 0.86698 1.67656 1.03528 1.24050 1.27783 1.21148 0.90207 0.86175 0.92581 1.20861 0.96571 1.04753 0.94800 1.16229 0.90712 1.14542 0.97692 1.25261 0.92213 0.92531 0.93227 1.81222 1.11738 1.11299 1.08198 1.20994 0.89678 0.91928 0.97145 1.20930 0.94960 1.14793 0.91462 1.98336 1.62084 1.97799 1.45318 0.94833 0.95757 0.92481 0.95047 0.87951 0.92385 0.75754 0.89436 0.90890 0.89143 0.83919 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.59 8.44 37.16 0.31 -2.28 16 2 C -0.13 -2.81 5.45 -26.73 -0.15 -2.96 16 3 C 0.27 6.09 2.24 -69.08 -0.15 5.94 16 4 H 0.06 1.53 7.52 -51.93 -0.39 1.14 16 5 C -0.54 -13.36 8.73 -34.44 -0.30 -13.66 16 6 H 0.06 1.47 7.74 -52.49 -0.41 1.06 16 7 C 0.07 1.79 5.29 -17.82 -0.09 1.70 16 8 N -0.88 -22.98 11.29 55.43 0.63 -22.35 16 9 Si 0.90 19.72 29.54 -169.99 -5.02 14.70 16 10 H -0.28 -6.04 7.11 56.52 0.40 -5.63 16 11 H -0.29 -6.24 7.11 56.52 0.40 -5.83 16 12 H -0.28 -5.99 7.11 56.52 0.40 -5.59 16 13 N -0.67 -12.66 5.10 -55.03 -0.28 -12.94 16 14 C 0.46 7.82 6.03 -155.13 -0.94 6.89 16 15 N -0.51 -8.69 6.26 -8.34 -0.05 -8.74 16 16 C 0.25 3.51 6.82 -82.16 -0.56 2.95 16 17 C -0.11 -1.31 9.77 36.01 0.35 -0.96 16 18 C -0.18 -2.39 5.75 -106.68 -0.61 -3.00 16 19 C 0.28 3.79 13.82 -22.47 -0.31 3.48 16 20 N -0.45 -6.68 18.54 41.84 0.78 -5.90 16 21 C 0.03 0.38 9.69 -38.88 -0.38 0.01 16 22 C -0.19 -2.71 6.35 -39.22 -0.25 -2.95 16 23 Cl -0.06 -0.85 27.59 -51.86 -1.43 -2.28 16 24 H 0.03 0.62 5.60 -51.93 -0.29 0.33 16 25 H 0.02 0.42 8.14 -51.93 -0.42 0.00 16 26 H 0.06 1.11 7.66 -51.93 -0.40 0.71 16 27 H 0.03 0.68 8.14 -51.93 -0.42 0.26 16 28 H 0.10 2.52 5.95 -51.93 -0.31 2.21 16 29 H 0.27 6.67 8.31 -40.82 -0.34 6.34 16 30 H 0.41 7.29 7.17 -40.82 -0.29 6.99 16 31 H 0.09 0.93 8.14 -51.93 -0.42 0.50 16 32 H 0.07 0.77 7.07 -51.93 -0.37 0.41 16 33 H 0.09 1.06 8.14 -51.93 -0.42 0.64 16 34 H 0.14 1.45 8.06 -52.49 -0.42 1.02 16 LS Contribution 305.67 15.07 4.61 4.61 Total: -1.00 -25.65 305.67 -7.56 -33.21 By element: Atomic # 1 Polarization: 8.26 SS G_CDS: -3.70 Total: 4.55 kcal Atomic # 6 Polarization: -1.78 SS G_CDS: -3.08 Total: -4.86 kcal Atomic # 7 Polarization: -51.00 SS G_CDS: 1.07 Total: -49.94 kcal Atomic # 14 Polarization: 19.72 SS G_CDS: -5.02 Total: 14.70 kcal Atomic # 17 Polarization: -0.85 SS G_CDS: -1.43 Total: -2.28 kcal Total LS contribution 4.61 Total: 4.61 kcal Total: -25.65 -7.56 -33.21 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000292662337.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 86.326 kcal (2) G-P(sol) polarization free energy of solvation -25.654 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 60.672 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.556 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.210 kcal (6) G-S(sol) free energy of system = (1) + (5) 53.117 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds