Wall clock time and date at job start Wed Apr 15 2020 11:43:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.46497 * 119.99766 * 2 1 4 4 C 1.50699 * 109.47282 * 269.99917 * 3 2 1 5 5 H 1.08000 * 120.00053 * 0.02562 * 4 3 2 6 6 C 1.37878 * 120.00431 * 180.02562 * 4 3 2 7 7 N 1.31512 * 119.99611 * 0.02562 * 6 4 3 8 8 Si 1.86794 * 120.00130 * 180.02562 * 6 4 3 9 9 H 1.48499 * 109.47280 * 359.97438 * 8 6 4 10 10 H 1.48494 * 109.47260 * 120.00199 * 8 6 4 11 11 H 1.48507 * 109.47078 * 239.99988 * 8 6 4 12 12 C 1.38734 * 119.99756 * 180.02562 * 2 1 3 13 13 C 1.40562 * 119.75346 * 4.99618 * 12 2 1 14 14 N 1.31135 * 120.61568 * 179.97438 * 13 12 2 15 15 C 1.33890 * 119.86536 * 0.02562 * 14 13 12 16 16 C 1.40529 * 120.92086 * 179.97438 * 15 14 13 17 17 C 1.36243 * 119.76414 * 180.02562 * 16 15 14 18 18 F 1.35104 * 119.57090 * 179.97438 * 17 16 15 19 19 C 1.39814 * 120.86250 * 0.25350 * 17 16 15 20 20 F 1.35095 * 119.57523 * 179.72717 * 19 17 16 21 21 C 1.36284 * 120.85122 * 359.47582 * 19 17 16 22 22 C 1.40488 * 119.74862 * 0.51824 * 21 19 17 23 23 N 1.31956 * 119.75012 * 184.97401 * 12 2 1 24 24 H 1.09004 * 109.46869 * 269.99989 * 1 2 3 25 25 H 1.08999 * 109.47277 * 29.99408 * 1 2 3 26 26 H 1.09003 * 109.47249 * 150.00133 * 1 2 3 27 27 H 1.09000 * 109.47714 * 29.99964 * 3 2 1 28 28 H 1.09007 * 109.46928 * 150.00276 * 3 2 1 29 29 H 0.97002 * 119.99756 * 179.97438 * 7 6 4 30 30 H 1.08002 * 119.69340 * 0.02562 * 13 12 2 31 31 H 1.08002 * 120.12127 * 0.02562 * 16 15 14 32 32 H 1.08001 * 120.12388 * 180.27942 * 21 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4486 1.7038 -1.4208 5 1 2.0974 1.0962 -2.2417 6 6 3.1268 2.8775 -1.6728 7 7 3.5550 3.6171 -0.6732 8 14 3.4375 3.4170 -3.4339 9 1 2.8596 2.4170 -4.3673 10 1 2.8005 4.7381 -3.6666 11 1 4.9001 3.5247 -3.6680 12 6 2.1587 -1.2015 -0.0005 13 6 1.4546 -2.4134 -0.1074 14 7 2.0931 -3.5587 -0.1101 15 6 3.4281 -3.5780 -0.0099 16 6 4.1348 -4.7927 -0.0100 17 6 5.4933 -4.7849 0.0937 18 9 6.1687 -5.9550 0.0937 19 6 6.1971 -3.5820 0.2060 20 9 7.5436 -3.6049 0.3129 21 6 5.5427 -2.3866 0.2038 22 6 4.1421 -2.3588 0.0985 23 7 3.4745 -1.1980 0.0988 24 1 -0.3633 0.0000 1.0277 25 1 -0.3634 0.8900 -0.5137 26 1 -0.3634 -0.8900 -0.5138 27 1 1.6084 2.0284 0.5138 28 1 3.1500 1.1384 0.5138 29 1 4.0324 4.4427 -0.8505 30 1 0.3777 -2.4011 -0.1888 31 1 3.6030 -5.7291 -0.0920 32 1 6.0985 -1.4643 0.2867 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000268152688.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 15 2020 11:43:49 Heat of formation + Delta-G solvation = -7.162522 kcal Electronic energy + Delta-G solvation = -20812.194226 eV Core-core repulsion = 17216.492862 eV Total energy + Delta-G solvation = -3595.701364 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 279.088 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -49.42826 -48.50151 -41.06384 -37.69163 -35.72541 -34.13857 -32.76844 -30.40844 -29.59860 -28.16056 -25.82551 -24.79980 -23.43312 -22.60718 -21.42046 -18.91245 -18.25967 -17.69592 -16.63976 -16.52937 -16.30007 -15.90933 -15.60202 -14.93239 -14.87172 -14.71040 -14.29859 -14.03312 -13.72164 -13.51328 -13.40382 -12.78438 -12.27652 -11.89639 -11.69081 -11.52271 -11.43363 -11.28762 -11.12421 -10.95971 -10.66005 -10.25854 -9.83610 -9.02558 -8.72562 -8.60007 -8.55246 -7.09394 -6.15519 -4.22909 0.26816 0.74804 2.08755 2.69240 3.21553 3.29119 3.30685 3.37317 3.78031 4.06490 4.20909 4.31026 4.36615 4.43343 4.69267 4.90162 5.14468 5.18781 5.28696 5.46124 5.49706 5.68558 5.73688 5.80998 5.93879 6.01749 6.24328 6.68163 6.73682 7.24588 7.46730 7.55803 7.77222 7.91886 8.06281 8.35547 8.81017 9.42487 10.90516 Molecular weight = 279.09amu Principal moments of inertia in cm(-1) A = 0.018263 B = 0.005187 C = 0.004356 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1532.776626 B = 5396.649180 C = 6426.156756 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.087 3.913 2 N -0.565 5.565 3 C 0.246 3.754 4 C -0.529 4.529 5 H 0.057 0.943 6 C 0.065 3.935 7 N -0.891 5.891 8 Si 0.897 3.103 9 H -0.274 1.274 10 H -0.283 1.283 11 H -0.282 1.282 12 C 0.391 3.609 13 C 0.046 3.954 14 N -0.398 5.398 15 C 0.007 3.993 16 C -0.060 4.060 17 C 0.043 3.957 18 F -0.132 7.132 19 C 0.101 3.899 20 F -0.127 7.127 21 C -0.113 4.113 22 C 0.169 3.831 23 N -0.492 5.492 24 H 0.053 0.947 25 H 0.084 0.916 26 H 0.063 0.937 27 H 0.035 0.965 28 H 0.055 0.945 29 H 0.264 0.736 30 H 0.172 0.828 31 H 0.153 0.847 32 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.557 -12.548 2.617 13.071 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.056 4.056 2 N -0.272 5.272 3 C 0.127 3.873 4 C -0.568 4.568 5 H 0.075 0.925 6 C -0.138 4.138 7 N -0.530 5.530 8 Si 0.725 3.275 9 H -0.199 1.199 10 H -0.209 1.209 11 H -0.208 1.208 12 C 0.139 3.861 13 C -0.140 4.140 14 N -0.109 5.109 15 C -0.118 4.118 16 C -0.081 4.081 17 C 0.020 3.980 18 F -0.111 7.111 19 C 0.079 3.921 20 F -0.105 7.105 21 C -0.134 4.134 22 C 0.040 3.960 23 N -0.218 5.218 24 H 0.071 0.929 25 H 0.102 0.898 26 H 0.081 0.919 27 H 0.053 0.947 28 H 0.073 0.927 29 H 0.074 0.926 30 H 0.189 0.811 31 H 0.170 0.830 32 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges -2.378 -12.282 2.676 12.793 hybrid contribution 0.581 0.335 -1.026 1.226 sum -1.797 -11.947 1.650 12.193 Atomic orbital electron populations 1.21805 0.79347 1.03299 1.01192 1.47303 1.05282 1.04552 1.70053 1.19515 0.92851 0.77124 0.97833 1.21408 1.36940 1.06491 0.91965 0.92456 1.24901 0.95205 0.96275 0.97423 1.69930 1.38033 1.14352 1.30687 0.86459 0.78187 0.78419 0.84470 1.19851 1.20860 1.20787 1.19633 0.89364 0.87754 0.89393 1.23660 1.01463 0.87406 1.01429 1.68408 1.07353 1.27964 1.07212 1.18840 0.90794 0.93062 1.09080 1.20385 0.90890 0.98502 0.98278 1.17017 0.90076 0.80410 1.10506 1.91513 1.80078 1.44933 1.94553 1.17223 0.77560 0.92955 1.04343 1.91534 1.28338 1.97250 1.93413 1.20548 0.92856 0.97401 1.02625 1.18945 0.93675 0.88709 0.94713 1.68519 1.06324 1.25617 1.21299 0.92874 0.89773 0.91886 0.94698 0.92750 0.92612 0.81078 0.82981 0.82291 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 1.18 10.28 59.85 0.62 1.80 16 2 N -0.57 -10.70 2.96 -182.84 -0.54 -11.24 16 3 C 0.25 5.83 5.22 -5.20 -0.03 5.80 16 4 C -0.53 -13.90 9.39 -34.44 -0.32 -14.22 16 5 H 0.06 1.53 7.81 -52.49 -0.41 1.12 16 6 C 0.06 1.74 5.46 -17.82 -0.10 1.64 16 7 N -0.89 -25.08 13.29 55.43 0.74 -24.34 16 8 Si 0.90 20.93 29.54 -169.99 -5.02 15.91 16 9 H -0.27 -6.35 7.11 56.52 0.40 -5.95 16 10 H -0.28 -6.47 7.11 56.52 0.40 -6.06 16 11 H -0.28 -6.62 7.11 56.52 0.40 -6.22 16 12 C 0.39 7.29 7.38 -155.12 -1.14 6.15 16 13 C 0.05 0.70 10.41 -16.97 -0.18 0.52 16 14 N -0.40 -6.30 10.45 -10.62 -0.11 -6.41 16 15 C 0.01 0.11 6.59 -84.78 -0.56 -0.45 16 16 C -0.06 -0.83 9.93 -39.44 -0.39 -1.22 16 17 C 0.04 0.60 7.24 -39.71 -0.29 0.31 16 18 F -0.13 -1.83 17.14 2.25 0.04 -1.79 16 19 C 0.10 1.50 7.24 -39.70 -0.29 1.22 16 20 F -0.13 -1.88 17.14 2.25 0.04 -1.84 16 21 C -0.11 -1.82 9.94 -39.44 -0.39 -2.21 16 22 C 0.17 3.04 6.59 -84.79 -0.56 2.49 16 23 N -0.49 -10.08 9.18 -10.03 -0.09 -10.17 16 24 H 0.05 0.61 8.14 -51.93 -0.42 0.19 16 25 H 0.08 1.18 8.07 -51.93 -0.42 0.76 16 26 H 0.06 0.67 5.96 -51.93 -0.31 0.36 16 27 H 0.04 0.85 8.07 -51.93 -0.42 0.43 16 28 H 0.05 1.44 7.30 -51.93 -0.38 1.06 16 29 H 0.26 7.05 8.31 -40.82 -0.34 6.71 16 30 H 0.17 1.96 5.99 -52.49 -0.31 1.64 16 31 H 0.15 1.73 8.06 -52.49 -0.42 1.31 16 32 H 0.16 2.50 8.06 -52.49 -0.42 2.08 16 LS Contribution 292.46 15.07 4.41 4.41 Total: -1.00 -29.41 292.46 -6.83 -36.24 By element: Atomic # 1 Polarization: 0.07 SS G_CDS: -2.65 Total: -2.59 kcal Atomic # 6 Polarization: 5.45 SS G_CDS: -3.63 Total: 1.82 kcal Atomic # 7 Polarization: -52.15 SS G_CDS: -0.01 Total: -52.16 kcal Atomic # 9 Polarization: -3.71 SS G_CDS: 0.08 Total: -3.63 kcal Atomic # 14 Polarization: 20.93 SS G_CDS: -5.02 Total: 15.91 kcal Total LS contribution 4.41 Total: 4.41 kcal Total: -29.41 -6.83 -36.24 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000268152688.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.080 kcal (2) G-P(sol) polarization free energy of solvation -29.414 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.334 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.829 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.243 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.163 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds