Wall clock time and date at job start Wed Apr 15 2020 11:43:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35668 * 116.99978 * 2 1 4 4 C 1.39482 * 120.01048 * 179.97438 * 3 2 1 5 5 N 1.31951 * 120.11363 * 180.02562 * 4 3 2 6 6 C 1.32192 * 120.14308 * 359.66181 * 5 4 3 7 7 C 1.39243 * 120.02154 * 0.61310 * 6 5 4 8 8 C 1.48126 * 120.05935 * 179.68584 * 7 6 5 9 9 O 1.21523 * 119.99837 * 359.72468 * 8 7 6 10 10 N 1.34773 * 120.00168 * 179.97438 * 8 7 6 11 11 C 1.47071 * 136.05574 * 359.36038 * 10 8 7 12 12 C 1.53242 * 88.08077 * 207.20007 * 11 10 8 13 13 O 1.42896 * 114.19955 * 87.72930 * 12 11 10 14 14 C 1.50703 * 114.32063 * 220.46984 * 12 11 10 15 15 H 1.08002 * 119.99892 * 93.76189 * 14 12 11 16 16 C 1.37875 * 119.99736 * 273.75358 * 14 12 11 17 17 N 1.31509 * 120.00289 * 0.02562 * 16 14 12 18 18 Si 1.86804 * 119.99882 * 180.02562 * 16 14 12 19 19 H 1.48498 * 109.47018 * 89.99921 * 18 16 14 20 20 H 1.48501 * 109.47014 * 210.00041 * 18 16 14 21 21 H 1.48497 * 109.47019 * 330.00258 * 18 16 14 22 22 C 1.47068 * 136.05956 * 179.72205 * 10 8 7 23 23 N 1.32160 * 120.00911 * 359.97438 * 3 2 1 24 24 H 1.08996 * 109.47187 * 300.00269 * 1 2 3 25 25 H 1.08998 * 109.46995 * 60.00051 * 1 2 3 26 26 H 1.09005 * 109.46762 * 180.02562 * 1 2 3 27 27 H 1.08000 * 119.94938 * 0.02562 * 4 3 2 28 28 H 1.08001 * 119.99331 * 180.32133 * 6 5 4 29 29 H 1.09003 * 113.46733 * 321.92543 * 11 10 8 30 30 H 1.09001 * 113.47022 * 92.37268 * 11 10 8 31 31 H 0.96691 * 114.00338 * 86.30407 * 13 12 11 32 32 H 0.97002 * 120.00686 * 179.97438 * 17 16 14 33 33 H 1.09001 * 113.46879 * 267.62846 * 22 10 8 34 34 H 1.08998 * 113.46582 * 38.00771 * 22 10 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0450 1.2088 0.0000 4 6 3.4379 1.2821 0.0005 5 7 4.0390 2.4567 0.0011 6 6 3.3239 3.5684 -0.0057 7 6 1.9330 3.5021 -0.0005 8 6 1.1308 4.7473 -0.0010 9 8 1.6865 5.8281 -0.0009 10 7 -0.2153 4.6818 0.0036 11 6 -1.2234 3.6109 -0.0019 12 6 -2.1827 4.5880 -0.6899 13 8 -2.0838 4.5999 -2.1154 14 6 -3.6033 4.5173 -0.1918 15 1 -3.9341 5.1816 0.5928 16 6 -4.4807 3.6047 -0.7381 17 7 -4.0777 2.7956 -1.6933 18 14 -6.2418 3.5175 -0.1213 19 1 -7.0916 4.4380 -0.9186 20 1 -6.7478 2.1286 -0.2633 21 1 -6.2858 3.9168 1.3083 22 6 -1.3226 5.6496 0.0097 23 7 1.3254 2.3173 -0.0005 24 1 -0.3633 0.5139 0.8899 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 4.0255 0.3759 0.0005 28 1 3.8184 4.5285 -0.0105 29 1 -0.9501 2.7607 -0.6269 30 1 -1.5473 3.3146 0.9958 31 1 -2.6268 3.9301 -2.5529 32 1 -4.6949 2.1533 -2.0774 33 1 -1.6732 5.9018 1.0105 34 1 -1.1332 6.5298 -0.6046 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000356581137.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 15 2020 11:43:18 Heat of formation + Delta-G solvation = -22.017560 kcal Electronic energy + Delta-G solvation = -21991.081863 eV Core-core repulsion = 18505.823852 eV Total energy + Delta-G solvation = -3485.258011 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 279.105 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -41.38360 -39.55517 -38.44388 -37.36851 -34.35914 -33.92879 -32.24029 -31.17446 -28.92686 -27.55356 -25.95185 -25.13842 -24.58430 -23.58082 -20.74967 -19.14134 -18.28840 -17.80002 -17.20515 -16.85371 -16.30686 -16.10165 -15.58115 -15.11842 -14.89533 -14.52887 -14.20512 -13.94822 -13.25975 -13.05134 -12.74135 -12.56021 -12.07639 -12.02497 -11.64135 -11.60127 -11.53480 -11.12732 -11.04868 -10.87599 -10.52638 -10.32962 -10.20377 -9.46485 -9.18290 -8.83691 -8.81404 -8.40572 -7.94515 -6.45567 -4.55693 0.42705 1.04913 2.85958 2.97594 3.10671 3.17971 3.19896 3.25230 3.85241 3.94600 4.12993 4.19461 4.40990 4.75924 4.96629 5.12621 5.27009 5.36977 5.42566 5.51935 5.73901 5.86639 6.01686 6.09848 6.35554 6.49030 6.52753 6.76979 6.94848 7.04243 7.06300 7.57600 7.59448 7.74916 8.28009 8.47199 8.54275 9.15479 9.43976 10.61194 Molecular weight = 279.11amu Principal moments of inertia in cm(-1) A = 0.020659 B = 0.005820 C = 0.004801 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1355.017925 B = 4809.790545 C = 5830.444563 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.301 6.301 3 C 0.273 3.727 4 C 0.055 3.945 5 N -0.408 5.408 6 C 0.056 3.944 7 C 0.094 3.906 8 C 0.587 3.413 9 O -0.550 6.550 10 N -0.609 5.609 11 C 0.086 3.914 12 C 0.236 3.764 13 O -0.571 6.571 14 C -0.532 4.532 15 H 0.073 0.927 16 C 0.073 3.927 17 N -0.898 5.898 18 Si 0.909 3.091 19 H -0.276 1.276 20 H -0.284 1.284 21 H -0.271 1.271 22 C 0.106 3.894 23 N -0.460 5.460 24 H 0.064 0.936 25 H 0.069 0.931 26 H 0.100 0.900 27 H 0.179 0.821 28 H 0.185 0.815 29 H 0.075 0.925 30 H 0.078 0.922 31 H 0.394 0.606 32 H 0.274 0.726 33 H 0.090 0.910 34 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.375 -6.054 3.453 10.147 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 O -0.206 6.206 3 C 0.088 3.912 4 C -0.110 4.110 5 N -0.122 5.122 6 C -0.102 4.102 7 C -0.046 4.046 8 C 0.373 3.627 9 O -0.429 6.429 10 N -0.339 5.339 11 C -0.037 4.037 12 C 0.194 3.806 13 O -0.385 6.385 14 C -0.571 4.571 15 H 0.091 0.909 16 C -0.130 4.130 17 N -0.538 5.538 18 Si 0.735 3.265 19 H -0.202 1.202 20 H -0.209 1.209 21 H -0.195 1.195 22 C -0.015 4.015 23 N -0.192 5.192 24 H 0.082 0.918 25 H 0.088 0.912 26 H 0.119 0.881 27 H 0.196 0.804 28 H 0.201 0.799 29 H 0.094 0.906 30 H 0.097 0.903 31 H 0.251 0.749 32 H 0.084 0.916 33 H 0.108 0.892 34 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges 8.283 -5.389 3.448 10.466 hybrid contribution -1.590 -0.688 0.214 1.746 sum 6.693 -6.078 3.661 9.754 Atomic orbital electron populations 1.23074 0.75883 1.03542 1.03631 1.86242 1.23893 1.23127 1.87338 1.21052 0.90991 0.85755 0.93411 1.23131 0.89722 0.97716 1.00395 1.68586 1.38034 0.97664 1.07878 1.23583 0.90697 0.98459 0.97451 1.22073 0.93182 0.91640 0.97743 1.17075 0.80678 0.86550 0.78372 1.90753 1.70606 1.28193 1.53392 1.49565 1.02534 1.14596 1.67226 1.24185 0.84847 0.93581 1.01099 1.19553 0.91524 0.89106 0.80412 1.86041 1.72080 1.62088 1.18251 1.21411 0.94602 1.19919 1.21125 0.90898 1.25062 0.99576 0.94083 0.94234 1.69263 1.36507 1.21818 1.26247 0.86317 0.83158 0.77537 0.79438 1.20204 1.20909 1.19536 1.23461 0.82562 0.95034 1.00470 1.68265 1.39492 0.97988 1.13467 0.91757 0.91234 0.88133 0.80360 0.79851 0.90632 0.90342 0.74944 0.91583 0.89234 0.91144 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.43 10.39 101.05 1.05 1.48 16 2 O -0.30 -4.05 10.49 -18.71 -0.20 -4.25 16 3 C 0.27 4.01 7.50 -16.95 -0.13 3.88 16 4 C 0.06 0.70 11.18 -17.04 -0.19 0.51 16 5 N -0.41 -5.76 10.48 -12.58 -0.13 -5.89 16 6 C 0.06 0.87 10.76 -17.02 -0.18 0.68 16 7 C 0.09 1.67 6.75 -82.86 -0.56 1.11 16 8 C 0.59 12.10 8.06 -12.20 -0.10 12.00 16 9 O -0.55 -12.16 17.11 5.35 0.09 -12.07 16 10 N -0.61 -12.94 3.69 -186.37 -0.69 -13.63 16 11 C 0.09 1.82 6.90 -8.63 -0.06 1.76 16 12 C 0.24 5.54 1.57 -91.39 -0.14 5.39 16 13 O -0.57 -14.55 13.54 -35.23 -0.48 -15.02 16 14 C -0.53 -12.91 8.69 -34.44 -0.30 -13.20 16 15 H 0.07 1.71 7.81 -52.49 -0.41 1.30 16 16 C 0.07 1.75 5.39 -17.82 -0.10 1.66 16 17 N -0.90 -21.93 11.01 55.43 0.61 -21.32 16 18 Si 0.91 18.81 29.54 -169.99 -5.02 13.79 16 19 H -0.28 -5.79 7.11 56.52 0.40 -5.39 16 20 H -0.28 -5.84 7.11 56.52 0.40 -5.44 16 21 H -0.27 -5.55 7.11 56.52 0.40 -5.15 16 22 C 0.11 2.27 8.04 -8.50 -0.07 2.20 16 23 N -0.46 -7.89 7.10 -9.69 -0.07 -7.96 16 24 H 0.06 0.85 8.11 -51.93 -0.42 0.43 16 25 H 0.07 1.01 7.87 -51.93 -0.41 0.60 16 26 H 0.10 0.98 8.14 -51.93 -0.42 0.55 16 27 H 0.18 1.62 8.06 -52.49 -0.42 1.20 16 28 H 0.18 2.57 7.64 -52.49 -0.40 2.17 16 29 H 0.08 1.65 6.95 -51.93 -0.36 1.29 16 30 H 0.08 1.61 8.10 -51.93 -0.42 1.19 16 31 H 0.39 10.12 6.32 45.56 0.29 10.41 16 32 H 0.27 6.35 8.31 -40.82 -0.34 6.01 16 33 H 0.09 1.73 8.10 -51.93 -0.42 1.31 16 34 H 0.07 1.52 8.14 -51.93 -0.42 1.10 16 LS Contribution 303.08 15.07 4.57 4.57 Total: -1.00 -27.67 303.08 -5.05 -32.71 By element: Atomic # 1 Polarization: 14.54 SS G_CDS: -2.96 Total: 11.58 kcal Atomic # 6 Polarization: 18.26 SS G_CDS: -0.78 Total: 17.49 kcal Atomic # 7 Polarization: -48.52 SS G_CDS: -0.28 Total: -48.80 kcal Atomic # 8 Polarization: -30.76 SS G_CDS: -0.58 Total: -31.34 kcal Atomic # 14 Polarization: 18.81 SS G_CDS: -5.02 Total: 13.79 kcal Total LS contribution 4.57 Total: 4.57 kcal Total: -27.67 -5.05 -32.71 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000356581137.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.696 kcal (2) G-P(sol) polarization free energy of solvation -27.668 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.971 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.046 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.714 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.018 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds