Wall clock time and date at job start Wed Apr 15 2020 11:45:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.47198 * 179.97438 * 2 1 4 4 C 1.53000 * 109.47410 * 48.91588 * 3 2 1 5 5 N 1.46501 * 109.47040 * 179.97438 * 4 3 2 6 6 C 1.30346 * 119.99637 * 121.48957 * 5 4 3 7 7 N 1.37289 * 119.61245 * 6.98159 * 6 5 4 8 8 H 0.96991 * 119.33297 * 0.25314 * 7 6 5 9 9 C 1.37280 * 121.33136 * 179.97438 * 7 6 5 10 10 C 1.34443 * 120.50185 * 0.02650 * 9 7 6 11 11 Cl 1.73593 * 120.39357 * 179.97438 * 10 9 7 12 12 C 1.46795 * 119.21517 * 359.97272 * 10 9 7 13 13 N 1.30891 * 120.62492 * 179.97438 * 12 10 9 14 14 C 1.46504 * 119.99481 * 359.31565 * 13 12 10 15 15 C 1.50705 * 109.46919 * 180.70075 * 14 13 12 16 16 H 1.07997 * 120.00078 * 0.02562 * 15 14 13 17 17 C 1.37877 * 120.00026 * 180.02562 * 15 14 13 18 18 N 1.31520 * 119.99683 * 359.97438 * 17 15 14 19 19 Si 1.86797 * 120.00187 * 180.02562 * 17 15 14 20 20 H 1.48502 * 109.47103 * 359.97438 * 19 17 15 21 21 H 1.48503 * 109.47238 * 119.99815 * 19 17 15 22 22 H 1.48501 * 109.47285 * 239.99901 * 19 17 15 23 23 N 1.37630 * 119.60952 * 186.96250 * 6 5 4 24 24 H 0.97006 * 120.28881 * 0.03901 * 23 6 5 25 25 H 1.09001 * 109.47141 * 288.91109 * 3 2 1 26 26 H 1.08998 * 109.46976 * 168.91876 * 3 2 1 27 27 H 1.09005 * 109.46893 * 59.99708 * 4 3 2 28 28 H 1.09001 * 109.46835 * 299.99867 * 4 3 2 29 29 H 1.07992 * 119.74658 * 179.97438 * 9 7 6 30 30 H 1.09000 * 109.47119 * 300.69614 * 14 13 12 31 31 H 1.09001 * 109.47218 * 60.70149 * 14 13 12 32 32 H 0.97003 * 119.99574 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1185 -0.9471 -1.0873 5 7 4.5835 -0.9459 -1.0876 6 6 5.2361 -2.0584 -0.8994 7 7 4.5502 -3.2464 -0.8455 8 1 3.5861 -3.2438 -0.9520 9 6 5.2018 -4.4387 -0.6494 10 6 6.5380 -4.4702 -0.5040 11 17 7.3591 -5.9793 -0.2556 12 6 7.2944 -3.2132 -0.5578 13 7 8.5959 -3.2118 -0.4191 14 6 9.3098 -4.4710 -0.1928 15 6 10.7843 -4.1940 -0.0509 16 1 11.1528 -3.1813 -0.1217 17 6 11.6630 -5.2334 0.1694 18 7 11.2141 -6.4666 0.2561 19 14 13.4906 -4.8901 0.3461 20 1 13.7356 -3.4317 0.2104 21 1 13.9536 -5.3483 1.6806 22 1 14.2355 -5.6172 -0.7130 23 7 6.6047 -2.0283 -0.7575 24 1 7.0822 -1.1848 -0.7965 25 1 2.9715 -0.3322 0.9722 26 1 2.9708 1.0093 -0.1975 27 1 2.7549 -0.6141 -2.0595 28 1 2.7556 -1.9557 -0.8896 29 1 4.6368 -5.3582 -0.6109 30 1 8.9389 -4.9402 0.7184 31 1 9.1453 -5.1389 -1.0384 32 1 11.8323 -7.1979 0.4114 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000362661635.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 15 2020 11:45:58 Heat of formation + Delta-G solvation = 118.860386 kcal Electronic energy + Delta-G solvation = -18449.242902 eV Core-core repulsion = 15279.951160 eV Total energy + Delta-G solvation = -3169.291742 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 281.074 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -40.60427 -37.47225 -36.79966 -35.82606 -34.99538 -33.81004 -32.50273 -31.15488 -29.09819 -27.19325 -24.78053 -23.54388 -22.57951 -20.32460 -19.59115 -17.93148 -17.88668 -16.71455 -16.29284 -15.80125 -15.53765 -15.16900 -14.76005 -14.38053 -14.21060 -13.61460 -13.34877 -13.08544 -12.99109 -12.76916 -12.39070 -12.22018 -11.97774 -11.54087 -11.14541 -10.86766 -10.68750 -10.46993 -10.28683 -10.06293 -9.67233 -9.52022 -8.50863 -8.01482 -7.83287 -7.29397 -6.01445 -4.01260 1.35585 2.03867 2.10266 2.48273 2.49197 2.89856 3.07579 3.32516 3.39811 3.46142 3.59659 3.73475 4.42926 4.45965 4.56129 4.78011 4.92056 5.01364 5.24967 5.34423 5.41843 5.49505 5.62598 5.93262 6.42554 6.51368 7.14599 7.18594 7.24510 7.42130 7.48932 7.91994 8.11329 8.24725 8.84197 9.06693 9.61627 11.08578 Molecular weight = 281.07amu Principal moments of inertia in cm(-1) A = 0.035666 B = 0.003453 C = 0.003208 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 784.875449 B = 8106.246275 C = 8726.953903 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.442 5.442 2 C 0.210 3.790 3 C -0.022 4.022 4 C 0.083 3.917 5 N -0.645 5.645 6 C 0.628 3.372 7 N -0.673 5.673 8 H 0.424 0.576 9 C 0.112 3.888 10 C -0.152 4.152 11 Cl 0.001 6.999 12 C 0.351 3.649 13 N -0.509 5.509 14 C 0.177 3.823 15 C -0.504 4.504 16 H 0.063 0.937 17 C 0.055 3.945 18 N -0.898 5.898 19 Si 0.899 3.101 20 H -0.272 1.272 21 H -0.285 1.285 22 H -0.285 1.285 23 N -0.610 5.610 24 H 0.437 0.563 25 H 0.108 0.892 26 H 0.119 0.881 27 H 0.082 0.918 28 H 0.034 0.966 29 H 0.165 0.835 30 H 0.045 0.955 31 H 0.045 0.955 32 H 0.260 0.740 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.934 5.214 -1.680 16.850 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.119 5.119 2 C -0.109 4.109 3 C -0.063 4.063 4 C -0.050 4.050 5 N -0.386 5.386 6 C 0.264 3.736 7 N -0.309 5.309 8 H 0.265 0.735 9 C -0.013 4.013 10 C -0.191 4.191 11 Cl 0.030 6.970 12 C 0.072 3.928 13 N -0.227 5.227 14 C 0.050 3.950 15 C -0.543 4.543 16 H 0.082 0.918 17 C -0.146 4.146 18 N -0.538 5.538 19 Si 0.727 3.273 20 H -0.197 1.197 21 H -0.211 1.211 22 H -0.211 1.211 23 N -0.250 5.250 24 H 0.279 0.721 25 H 0.126 0.874 26 H 0.137 0.863 27 H 0.100 0.900 28 H 0.053 0.947 29 H 0.182 0.818 30 H 0.062 0.938 31 H 0.062 0.938 32 H 0.069 0.931 Dipole moment (debyes) X Y Z Total from point charges -16.425 6.164 -1.718 17.628 hybrid contribution 0.449 -1.286 0.181 1.375 sum -15.976 4.878 -1.537 16.775 Atomic orbital electron populations 1.81247 1.13106 1.08861 1.08704 1.29272 0.95309 0.93126 0.93147 1.19285 0.80571 1.04331 1.02108 1.21411 0.88480 0.96635 0.98442 1.72626 1.06933 1.20191 1.38844 1.18897 0.84631 0.82326 0.87749 1.42488 1.11057 1.04042 1.73299 0.73484 1.21393 0.92395 0.89707 0.97770 1.22069 0.92109 0.89920 1.15046 1.98470 1.76285 1.27733 1.94544 1.19479 0.90288 0.82387 1.00606 1.72073 1.02909 1.35851 1.11841 1.20553 0.93324 0.83339 0.97735 1.21192 0.90956 0.94006 1.48096 0.91834 1.24928 0.99066 0.94942 0.95636 1.69960 1.34720 0.98792 1.50305 0.86417 0.84920 0.78434 0.77510 1.19668 1.21091 1.21100 1.41041 1.01603 1.09229 1.73118 0.72142 0.87442 0.86261 0.89978 0.94749 0.81819 0.93793 0.93762 0.93062 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.44 -5.00 18.54 42.15 0.78 -4.22 16 2 C 0.21 1.71 15.43 -20.76 -0.32 1.39 16 3 C -0.02 -0.12 6.03 -29.52 -0.18 -0.30 16 4 C 0.08 0.57 6.24 -4.04 -0.03 0.55 16 5 N -0.65 -6.50 10.62 -61.79 -0.66 -7.15 16 6 C 0.63 7.15 8.48 -320.15 -2.71 4.43 16 7 N -0.67 -6.16 5.24 -13.33 -0.07 -6.23 16 8 H 0.42 2.53 6.09 -40.82 -0.25 2.28 16 9 C 0.11 1.20 10.98 -16.45 -0.18 1.02 16 10 C -0.15 -2.37 6.42 -37.46 -0.24 -2.61 16 11 Cl 0.00 0.02 22.96 -51.86 -1.19 -1.17 16 12 C 0.35 6.25 7.86 -153.61 -1.21 5.04 16 13 N -0.51 -11.39 10.64 -59.71 -0.64 -12.03 16 14 C 0.18 4.52 3.93 -5.19 -0.02 4.50 16 15 C -0.50 -14.33 9.39 -34.44 -0.32 -14.65 16 16 H 0.06 1.83 7.81 -52.49 -0.41 1.42 16 17 C 0.06 1.55 5.46 -17.82 -0.10 1.45 16 18 N -0.90 -25.81 13.29 55.43 0.74 -25.07 16 19 Si 0.90 21.62 29.54 -169.99 -5.02 16.60 16 20 H -0.27 -6.49 7.11 56.52 0.40 -6.08 16 21 H -0.28 -6.76 7.11 56.52 0.40 -6.36 16 22 H -0.28 -6.77 7.11 56.52 0.40 -6.37 16 23 N -0.61 -8.61 5.53 -11.22 -0.06 -8.67 16 24 H 0.44 5.84 8.94 -40.82 -0.36 5.48 16 25 H 0.11 0.54 8.14 -51.93 -0.42 0.12 16 26 H 0.12 0.57 8.14 -51.93 -0.42 0.15 16 27 H 0.08 0.54 8.14 -51.93 -0.42 0.12 16 28 H 0.03 0.19 5.38 -51.93 -0.28 -0.09 16 29 H 0.16 1.19 8.06 -52.49 -0.42 0.77 16 30 H 0.04 1.17 6.28 -51.93 -0.33 0.85 16 31 H 0.04 1.18 6.26 -51.93 -0.33 0.86 16 32 H 0.26 7.08 8.31 -40.82 -0.34 6.74 16 LS Contribution 299.44 15.07 4.51 4.51 Total: -1.00 -33.05 299.44 -9.69 -42.74 By element: Atomic # 1 Polarization: 2.65 SS G_CDS: -2.78 Total: -0.13 kcal Atomic # 6 Polarization: 6.13 SS G_CDS: -5.31 Total: 0.82 kcal Atomic # 7 Polarization: -63.47 SS G_CDS: 0.09 Total: -63.37 kcal Atomic # 14 Polarization: 21.62 SS G_CDS: -5.02 Total: 16.60 kcal Atomic # 17 Polarization: 0.02 SS G_CDS: -1.19 Total: -1.17 kcal Total LS contribution 4.51 Total: 4.51 kcal Total: -33.05 -9.69 -42.74 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000362661635.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 161.602 kcal (2) G-P(sol) polarization free energy of solvation -33.050 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 128.552 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.691 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.742 kcal (6) G-S(sol) free energy of system = (1) + (5) 118.860 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds