Wall clock time and date at job start Wed Apr 15 2020 11:47:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35999 * 117.00309 * 2 1 4 4 C 1.38660 * 119.98744 * 359.72642 * 3 2 1 5 5 C 1.38476 * 120.30171 * 179.76146 * 4 3 2 6 6 Cl 1.73612 * 119.85814 * 180.25789 * 5 4 3 7 7 C 1.38036 * 120.28406 * 0.51187 * 5 4 3 8 8 C 1.39705 * 119.97378 * 359.74398 * 7 5 4 9 9 C 1.47450 * 120.15095 * 180.02562 * 8 7 5 10 10 N 1.29749 * 120.00159 * 179.97438 * 9 8 7 11 11 N 1.40101 * 120.00333 * 180.02562 * 10 9 8 12 12 C 1.46499 * 120.00098 * 179.97438 * 11 10 9 13 13 C 1.50696 * 109.47133 * 179.97438 * 12 11 10 14 14 H 1.08000 * 120.00054 * 359.97438 * 13 12 11 15 15 C 1.37881 * 120.00096 * 179.97438 * 13 12 11 16 16 N 1.31508 * 119.99873 * 0.02562 * 15 13 12 17 17 Si 1.86797 * 119.99841 * 180.02562 * 15 13 12 18 18 H 1.48503 * 109.47537 * 359.97438 * 17 15 13 19 19 H 1.48495 * 109.47117 * 120.00073 * 17 15 13 20 20 H 1.48500 * 109.46960 * 239.99741 * 17 15 13 21 21 C 1.38897 * 119.99220 * 179.97438 * 3 2 1 22 22 O 1.35965 * 120.14107 * 359.96512 * 21 3 2 23 23 H 1.09001 * 109.47103 * 300.00173 * 1 2 3 24 24 H 1.09004 * 109.47054 * 59.99677 * 1 2 3 25 25 H 1.09000 * 109.47187 * 179.97438 * 1 2 3 26 26 H 1.07999 * 119.84977 * 359.97438 * 4 3 2 27 27 H 1.07998 * 120.01844 * 179.76269 * 7 5 4 28 28 H 1.07997 * 120.00042 * 359.97438 * 9 8 7 29 29 H 0.97000 * 119.99686 * 359.97438 * 11 10 9 30 30 H 1.09004 * 109.46932 * 299.99939 * 12 11 10 31 31 H 1.09004 * 109.47063 * 59.99731 * 12 11 10 32 32 H 0.97001 * 120.00206 * 179.97438 * 16 15 13 33 33 H 0.96701 * 114.00317 * 89.99422 * 22 21 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 1.2912 2.3745 -0.0057 5 6 1.9131 3.6117 -0.0008 6 17 0.9560 5.0602 -0.0013 7 6 3.2907 3.6983 -0.0008 8 6 4.0632 2.5343 -0.0003 9 6 5.5351 2.6222 0.0003 10 7 6.2498 1.5393 0.0012 11 7 7.6483 1.6228 0.0023 12 6 8.4551 0.4000 0.0039 13 6 9.9177 0.7633 0.0042 14 1 10.2163 1.8011 0.0029 15 6 10.8746 -0.2294 0.0062 16 7 10.5109 -1.4932 0.0073 17 14 12.6874 0.2209 0.0073 18 1 12.8304 1.6990 0.0052 19 1 13.3355 -0.3378 1.2210 20 1 13.3377 -0.3406 -1.2039 21 6 3.4336 1.2842 0.0005 22 8 4.1767 0.1455 0.0018 23 1 -0.3633 0.5139 0.8900 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 0.2128 2.3150 -0.0106 27 1 3.7713 4.6655 -0.0008 28 1 6.0184 3.5881 0.0000 29 1 8.0823 2.4903 0.0020 30 1 8.2256 -0.1856 0.8942 31 1 8.2271 -0.1869 -0.8859 32 1 11.1841 -2.1917 0.0083 33 1 4.3920 -0.1846 -0.8812 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000002760917.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 15 2020 11:47:05 Heat of formation + Delta-G solvation = -15.546294 kcal Electronic energy + Delta-G solvation = -19009.204403 eV Core-core repulsion = 15676.761458 eV Total energy + Delta-G solvation = -3332.442945 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 284.071 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -40.43958 -38.09055 -37.10263 -36.12022 -35.73818 -33.42312 -31.73291 -29.87567 -29.46205 -27.41756 -26.16602 -23.49683 -22.51533 -21.78702 -20.38458 -18.32327 -17.65411 -17.29721 -16.50179 -16.04213 -15.60806 -15.30958 -15.04684 -14.59000 -14.27351 -14.02599 -13.41724 -13.14857 -13.03754 -12.51079 -12.47255 -12.09812 -11.89465 -11.60558 -11.53483 -11.15032 -10.98074 -10.93543 -10.53331 -10.50376 -10.27821 -9.56330 -9.30974 -8.99657 -8.57441 -8.17603 -6.90118 -6.21799 -4.27700 0.82991 1.14479 1.94104 2.79740 3.07677 3.21424 3.28377 3.31563 3.68301 3.70887 4.31444 4.33884 4.73382 4.84453 4.95381 4.97733 5.10261 5.15250 5.23090 5.29611 5.56732 5.78825 5.89951 6.04390 6.20564 6.47477 6.71256 7.11560 7.37082 7.50209 7.68777 7.99542 8.02755 8.07423 8.79723 9.19647 9.38143 10.88597 Molecular weight = 284.07amu Principal moments of inertia in cm(-1) A = 0.026684 B = 0.003172 C = 0.002842 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1049.077194 B = 8824.926781 C = 9850.972739 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.301 6.301 3 C 0.114 3.886 4 C -0.202 4.202 5 C -0.003 4.003 6 Cl -0.073 7.073 7 C -0.128 4.128 8 C 0.020 3.980 9 C -0.030 4.030 10 N -0.160 5.160 11 N -0.620 5.620 12 C 0.280 3.720 13 C -0.541 4.541 14 H 0.062 0.938 15 C 0.065 3.935 16 N -0.886 5.886 17 Si 0.906 3.094 18 H -0.272 1.272 19 H -0.281 1.281 20 H -0.281 1.281 21 C 0.098 3.902 22 O -0.457 6.457 23 H 0.055 0.945 24 H 0.055 0.945 25 H 0.101 0.899 26 H 0.138 0.862 27 H 0.139 0.861 28 H 0.108 0.892 29 H 0.371 0.629 30 H 0.023 0.977 31 H 0.022 0.978 32 H 0.266 0.734 33 H 0.387 0.613 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -20.487 8.463 -1.668 22.228 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.214 6.214 3 C 0.068 3.932 4 C -0.223 4.223 5 C -0.030 4.030 6 Cl -0.044 7.044 7 C -0.149 4.149 8 C 0.016 3.984 9 C -0.236 4.236 10 N 0.025 4.975 11 N -0.358 5.358 12 C 0.159 3.841 13 C -0.580 4.580 14 H 0.081 0.919 15 C -0.139 4.139 16 N -0.523 5.523 17 Si 0.733 3.267 18 H -0.197 1.197 19 H -0.207 1.207 20 H -0.207 1.207 21 C 0.049 3.951 22 O -0.266 6.266 23 H 0.074 0.926 24 H 0.073 0.927 25 H 0.119 0.881 26 H 0.156 0.844 27 H 0.157 0.843 28 H 0.126 0.874 29 H 0.208 0.792 30 H 0.041 0.959 31 H 0.040 0.960 32 H 0.076 0.924 33 H 0.244 0.756 Dipole moment (debyes) X Y Z Total from point charges -20.303 7.051 -1.060 21.519 hybrid contribution 1.014 1.587 -0.460 1.938 sum -19.289 8.638 -1.520 21.190 Atomic orbital electron populations 1.23105 0.78619 1.04077 1.01294 1.86214 1.21056 1.25631 1.88507 1.19187 0.91491 0.84457 0.98088 1.20872 1.00365 0.90183 1.10840 1.20306 0.91342 0.86931 1.04371 1.98360 1.72000 1.37046 1.96981 1.20788 0.90909 0.98554 1.04663 1.18460 0.91548 0.90969 0.97417 1.23193 0.91140 0.94822 1.14415 1.74158 0.94320 1.27536 1.01493 1.49213 0.97184 1.10168 1.79188 1.18980 0.87424 0.80625 0.97099 1.21206 0.90182 0.93480 1.53152 0.91947 1.24909 0.99624 0.94686 0.94642 1.69968 1.34204 0.99167 1.48985 0.86329 0.83981 0.78628 0.77796 1.19658 1.20717 1.20734 1.17877 0.85805 0.87101 1.04334 1.84934 1.71093 1.37746 1.32849 0.92598 0.92653 0.88092 0.84444 0.84286 0.87420 0.79229 0.95911 0.96029 0.92425 0.75584 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.19 9.81 101.05 0.99 1.18 16 2 O -0.30 -3.80 10.28 -34.40 -0.35 -4.16 16 3 C 0.11 1.52 6.69 -39.18 -0.26 1.26 16 4 C -0.20 -2.27 8.81 -39.34 -0.35 -2.62 16 5 C 0.00 -0.03 6.31 -39.57 -0.25 -0.28 16 6 Cl -0.07 -0.73 28.94 -51.86 -1.50 -2.23 16 7 C -0.13 -1.56 9.56 -39.11 -0.37 -1.93 16 8 C 0.02 0.29 5.88 -104.95 -0.62 -0.33 16 9 C -0.03 -0.49 10.75 -14.68 -0.16 -0.65 16 10 N -0.16 -3.18 9.34 32.15 0.30 -2.88 16 11 N -0.62 -13.61 6.63 -11.66 -0.08 -13.68 16 12 C 0.28 7.28 6.42 -5.20 -0.03 7.25 16 13 C -0.54 -14.66 9.28 -34.44 -0.32 -14.98 16 14 H 0.06 1.62 7.60 -52.49 -0.40 1.22 16 15 C 0.07 1.79 5.46 -17.82 -0.10 1.69 16 16 N -0.89 -25.56 13.29 55.43 0.74 -24.82 16 17 Si 0.91 20.77 29.54 -169.99 -5.02 15.75 16 18 H -0.27 -6.09 7.11 56.52 0.40 -5.69 16 19 H -0.28 -6.41 7.11 56.52 0.40 -6.01 16 20 H -0.28 -6.39 7.11 56.52 0.40 -5.99 16 21 C 0.10 1.50 6.73 -38.69 -0.26 1.24 16 22 O -0.46 -7.74 11.16 -34.29 -0.38 -8.12 16 23 H 0.06 0.38 7.67 -51.93 -0.40 -0.02 16 24 H 0.05 0.36 7.65 -51.93 -0.40 -0.04 16 25 H 0.10 0.60 8.14 -51.93 -0.42 0.18 16 26 H 0.14 1.22 6.27 -52.49 -0.33 0.89 16 27 H 0.14 1.43 8.06 -52.49 -0.42 1.01 16 28 H 0.11 1.55 8.02 -52.49 -0.42 1.13 16 29 H 0.37 7.46 8.28 -182.60 -1.51 5.95 16 30 H 0.02 0.65 8.14 -51.93 -0.42 0.23 16 31 H 0.02 0.60 8.14 -51.93 -0.42 0.18 16 32 H 0.27 7.18 8.31 -40.82 -0.34 6.84 16 33 H 0.39 5.46 9.06 45.56 0.41 5.87 16 LS Contribution 311.52 15.07 4.69 4.69 Total: -1.00 -30.67 311.52 -7.20 -37.86 By element: Atomic # 1 Polarization: 9.62 SS G_CDS: -3.87 Total: 5.75 kcal Atomic # 6 Polarization: -6.45 SS G_CDS: -1.73 Total: -8.18 kcal Atomic # 7 Polarization: -42.34 SS G_CDS: 0.96 Total: -41.38 kcal Atomic # 8 Polarization: -11.54 SS G_CDS: -0.74 Total: -12.28 kcal Atomic # 14 Polarization: 20.77 SS G_CDS: -5.02 Total: 15.75 kcal Atomic # 17 Polarization: -0.73 SS G_CDS: -1.50 Total: -2.23 kcal Total LS contribution 4.69 Total: 4.69 kcal Total: -30.67 -7.20 -37.86 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000002760917.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.318 kcal (2) G-P(sol) polarization free energy of solvation -30.666 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.348 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.198 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.865 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.546 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds