Wall clock time and date at job start Wed Apr 15 2020 11:46:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31617 * 1 3 3 Si 1.86798 * 120.00264 * 2 1 4 4 H 1.48495 * 109.47422 * 179.97438 * 3 2 1 5 5 H 1.48507 * 109.46863 * 299.99541 * 3 2 1 6 6 H 1.48501 * 109.47343 * 59.99538 * 3 2 1 7 7 C 1.38813 * 119.99718 * 179.97438 * 2 1 3 8 8 H 1.07998 * 119.99862 * 180.02562 * 7 2 1 9 9 N 1.36934 * 120.00218 * 0.02562 * 7 2 1 10 10 C 1.46500 * 120.00053 * 180.02562 * 9 7 2 11 11 H 1.09003 * 112.85046 * 336.19310 * 10 9 7 12 12 C 1.53775 * 113.61656 * 107.50469 * 10 9 7 13 13 C 1.53779 * 87.08438 * 139.98199 * 12 10 9 14 14 H 1.09002 * 113.61731 * 89.11293 * 13 12 10 15 15 N 1.46500 * 113.68825 * 220.00754 * 13 12 10 16 16 C 1.34778 * 119.99919 * 254.05902 * 15 13 12 17 17 O 1.21582 * 119.99933 * 0.02562 * 16 15 13 18 18 C 1.47519 * 119.99941 * 180.02562 * 16 15 13 19 19 C 1.36786 * 126.92983 * 179.97438 * 18 16 15 20 20 C 1.41404 * 103.84048 * 179.97438 * 19 18 16 21 21 Cl 1.73601 * 126.72663 * 180.02562 * 20 19 18 22 22 N 1.30230 * 106.55080 * 359.97438 * 20 19 18 23 23 O 1.20889 * 111.95681 * 359.72492 * 22 20 19 24 24 C 1.53777 * 113.61534 * 205.00207 * 10 9 7 25 25 H 0.97006 * 119.99910 * 0.02562 * 1 2 3 26 26 H 0.97002 * 119.99863 * 359.97438 * 9 7 2 27 27 H 1.08993 * 113.61636 * 25.42563 * 12 10 9 28 28 H 1.09008 * 113.61006 * 254.52805 * 12 10 9 29 29 H 0.96998 * 119.99853 * 74.06469 * 15 13 12 30 30 H 1.07998 * 128.07440 * 359.97438 * 19 18 16 31 31 H 1.08997 * 113.61941 * 105.46412 * 24 10 9 32 32 H 1.09005 * 113.61136 * 334.56577 * 24 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3162 0.0000 0.0000 3 14 2.2502 1.6177 0.0000 4 1 3.7102 1.3463 0.0006 5 1 1.8915 2.3963 -1.2126 6 1 1.8915 2.3965 1.2124 7 6 2.0102 -1.2022 0.0005 8 1 3.0902 -1.2022 0.0010 9 7 1.3255 -2.3881 0.0005 10 6 2.0580 -3.6568 0.0017 11 1 3.0658 -3.5641 -0.4031 12 6 1.9979 -4.4016 1.3457 13 6 1.8474 -5.6974 0.5314 14 1 2.7982 -6.1634 0.2725 15 7 0.8871 -6.6441 1.1038 16 6 1.3261 -7.7560 1.7263 17 8 2.5193 -7.9730 1.8132 18 6 0.3591 -8.7095 2.3022 19 6 0.6454 -9.8745 2.9593 20 6 -0.6258 -10.3936 3.2971 21 17 -0.9508 -11.8691 4.1521 22 7 -1.5049 -9.5475 2.8420 23 8 -0.9833 -8.6052 2.2929 24 6 1.2605 -4.8290 -0.5939 25 1 -0.4850 0.8401 -0.0004 26 1 0.3555 -2.3880 0.0005 27 1 1.1193 -4.1561 1.9421 28 1 2.9257 -4.3494 1.9156 29 1 -0.0648 -6.4707 1.0347 30 1 1.6158 -10.2987 3.1707 31 1 1.5927 -5.1219 -1.5899 32 1 0.1801 -4.7004 -0.5279 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001023008088.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 15 2020 11:46:53 Heat of formation + Delta-G solvation = 59.000257 kcal Electronic energy + Delta-G solvation = -19130.864876 eV Core-core repulsion = 15736.228601 eV Total energy + Delta-G solvation = -3394.636275 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 285.067 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -45.59238 -40.09161 -38.14082 -37.58079 -34.49866 -34.02932 -33.09440 -32.16378 -29.92219 -25.54554 -25.23073 -24.05657 -24.02377 -22.19113 -20.95948 -19.85787 -18.71367 -18.37178 -17.20047 -16.68010 -16.47681 -15.56318 -15.09563 -14.78888 -14.60978 -14.20643 -14.10197 -13.19965 -13.10975 -13.00398 -12.85128 -12.32551 -12.00928 -11.55213 -11.34359 -11.01867 -10.87220 -10.59391 -10.52403 -10.49294 -10.28296 -10.24564 -10.04002 -9.69693 -9.06457 -8.93200 -7.04068 -5.84461 -3.13750 0.31692 0.97286 1.35104 2.16006 2.69106 2.96935 3.39757 3.46048 3.47922 3.78792 4.24178 4.49274 4.54711 4.58657 4.89489 5.09836 5.20414 5.25908 5.40519 5.74680 5.80211 6.00318 6.17162 6.21079 6.25794 6.52036 6.58348 6.92032 7.17559 7.45165 7.65489 7.78970 8.33775 9.45480 10.01190 10.35430 11.37836 Molecular weight = 285.07amu Principal moments of inertia in cm(-1) A = 0.043267 B = 0.002644 C = 0.002569 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 646.994538 B =10587.811926 C =10896.906157 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.932 5.932 2 C -0.012 4.012 3 Si 0.908 3.092 4 H -0.279 1.279 5 H -0.291 1.291 6 H -0.291 1.291 7 C -0.245 4.245 8 H 0.073 0.927 9 N -0.710 5.710 10 C 0.170 3.830 11 H 0.082 0.918 12 C -0.177 4.177 13 C 0.114 3.886 14 H 0.115 0.885 15 N -0.692 5.692 16 C 0.602 3.398 17 O -0.511 6.511 18 C -0.063 4.063 19 C -0.140 4.140 20 C 0.050 3.950 21 Cl 0.032 6.968 22 N -0.327 5.327 23 O 0.139 5.861 24 C -0.158 4.158 25 H 0.256 0.744 26 H 0.386 0.614 27 H 0.082 0.918 28 H 0.062 0.938 29 H 0.408 0.592 30 H 0.194 0.806 31 H 0.070 0.930 32 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.647 -21.888 4.777 22.412 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.580 5.580 2 C -0.208 4.208 3 Si 0.739 3.261 4 H -0.205 1.205 5 H -0.218 1.218 6 H -0.218 1.218 7 C -0.377 4.377 8 H 0.091 0.909 9 N -0.347 5.347 10 C 0.057 3.943 11 H 0.100 0.900 12 C -0.219 4.219 13 C 0.011 3.989 14 H 0.133 0.867 15 N -0.342 5.342 16 C 0.384 3.616 17 O -0.386 6.386 18 C -0.129 4.129 19 C -0.164 4.164 20 C -0.133 4.133 21 Cl 0.060 6.940 22 N -0.027 5.027 23 O 0.061 5.939 24 C -0.198 4.198 25 H 0.066 0.934 26 H 0.220 0.780 27 H 0.101 0.899 28 H 0.081 0.919 29 H 0.244 0.756 30 H 0.212 0.788 31 H 0.089 0.911 32 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges -1.020 -21.955 4.917 22.522 hybrid contribution 0.221 0.492 0.345 0.641 sum -0.799 -21.463 5.261 22.113 Atomic orbital electron populations 1.69666 1.05165 1.25749 1.57373 1.24778 0.95543 0.97872 1.02643 0.86108 0.78848 0.83952 0.77208 1.20455 1.21808 1.21825 1.19350 0.91188 0.84084 1.43036 0.90880 1.42365 1.05731 0.99750 1.86892 1.21335 0.95587 0.84967 0.92458 0.90010 1.24385 1.02210 0.94523 1.00766 1.22721 0.92965 0.87202 0.96045 0.86741 1.46028 1.11477 1.21263 1.55408 1.16478 0.85876 0.80412 0.78811 1.90890 1.13960 1.75226 1.58555 1.24421 0.84177 0.99398 1.04909 1.22742 0.99368 0.94367 0.99882 1.24073 0.90789 0.94712 1.03697 1.98429 1.95725 1.26538 1.73324 1.73884 1.21709 0.97005 1.10074 1.85080 1.18076 1.34730 1.55998 1.23897 1.01509 0.97048 0.97347 0.93442 0.78025 0.89924 0.91883 0.75647 0.78832 0.91123 0.89649 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.93 -27.33 13.06 55.49 0.72 -26.61 16 2 C -0.01 -0.34 5.50 -17.43 -0.10 -0.44 16 3 Si 0.91 21.84 29.55 -169.99 -5.02 16.81 16 4 H -0.28 -6.50 7.11 56.52 0.40 -6.10 16 5 H -0.29 -7.05 7.11 56.52 0.40 -6.64 16 6 H -0.29 -7.07 7.11 56.52 0.40 -6.67 16 7 C -0.25 -6.56 9.97 -15.06 -0.15 -6.71 16 8 H 0.07 1.90 7.83 -52.49 -0.41 1.48 16 9 N -0.71 -16.75 5.40 -52.64 -0.28 -17.04 16 10 C 0.17 3.06 4.48 -67.12 -0.30 2.76 16 11 H 0.08 1.46 8.10 -51.93 -0.42 1.04 16 12 C -0.18 -2.82 7.68 -25.92 -0.20 -3.01 16 13 C 0.11 1.50 4.22 -67.12 -0.28 1.22 16 14 H 0.11 1.51 7.50 -51.93 -0.39 1.12 16 15 N -0.69 -7.86 5.36 -54.06 -0.29 -8.15 16 16 C 0.60 7.25 7.82 -12.48 -0.10 7.15 16 17 O -0.51 -7.56 16.53 5.29 0.09 -7.48 16 18 C -0.06 -0.66 7.29 -36.33 -0.26 -0.92 16 19 C -0.14 -1.31 10.96 -38.90 -0.43 -1.74 16 20 C 0.05 0.50 7.97 -17.03 -0.14 0.36 16 21 Cl 0.03 0.26 29.33 -51.86 -1.52 -1.26 16 22 N -0.33 -3.68 12.05 32.82 0.40 -3.28 16 23 O 0.14 1.46 11.04 15.54 0.17 1.63 16 24 C -0.16 -2.23 7.58 -25.92 -0.20 -2.43 16 25 H 0.26 7.27 8.31 -40.82 -0.34 6.93 16 26 H 0.39 9.63 7.92 -40.82 -0.32 9.31 16 27 H 0.08 1.40 8.14 -51.93 -0.42 0.98 16 28 H 0.06 1.01 8.14 -51.92 -0.42 0.59 16 29 H 0.41 3.87 8.54 -40.82 -0.35 3.53 16 30 H 0.19 1.43 8.06 -52.49 -0.42 1.00 16 31 H 0.07 0.92 8.14 -51.93 -0.42 0.50 16 32 H 0.09 1.20 8.09 -51.93 -0.42 0.78 16 LS Contribution 305.88 15.07 4.61 4.61 Total: -1.00 -30.25 305.88 -6.42 -36.67 By element: Atomic # 1 Polarization: 10.98 SS G_CDS: -3.14 Total: 7.84 kcal Atomic # 6 Polarization: -1.60 SS G_CDS: -2.15 Total: -3.75 kcal Atomic # 7 Polarization: -55.62 SS G_CDS: 0.55 Total: -55.08 kcal Atomic # 8 Polarization: -6.11 SS G_CDS: 0.26 Total: -5.85 kcal Atomic # 14 Polarization: 21.84 SS G_CDS: -5.02 Total: 16.81 kcal Atomic # 17 Polarization: 0.26 SS G_CDS: -1.52 Total: -1.26 kcal Total LS contribution 4.61 Total: 4.61 kcal Total: -30.25 -6.42 -36.67 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001023008088.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 95.673 kcal (2) G-P(sol) polarization free energy of solvation -30.254 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 65.419 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.419 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.672 kcal (6) G-S(sol) free energy of system = (1) + (5) 59.000 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds